Controlled nucleation of topological defects in the stripe domain patterns of Lateral multilayers with Perpendicular Magnetic Anisotropy: competition between magnetostatic, exchange and misfit interactions

Magnetic lateral multilayers have been fabricated on weak perpendicular magnetic anisotropy amorphous Nd-Co films in order to perform a systematic study on the conditions for controlled nucleation of topological defects within their magnetic stripe domain pattern. A lateral thickness modulation of period $w$ is defined on the nanostructured samples that, in turn, induces a lateral modulation of both magnetic stripe domain periods $\lambda$ and average in-plane magnetization component $M_{inplane}$. Depending on lateral multilayer period and in-plane applied field, thin and thick regions switch independently during in-plane magnetization reversal and domain walls are created within the in-plane magnetization configuration coupled to variable angle grain boundaries and disclinations within the magnetic stripe domain patterns. This process is mainly driven by the competition between rotatable anisotropy (that couples the magnetic stripe pattern to in-plane magnetization) and in-plane shape anisotropy induced by the periodic thickness modulation. However, as the structural period $w$ becomes comparable to magnetic stripe period $\lambda$, the nucleation of topological defects at the interfaces between thin and thick regions is hindered by a size effect and stripe domains in the different thickness regions become strongly coupled.Comment: 10 pages, 7 figures, submitted to Physical Review

Double percolation effects and fractal behavior in magnetic/superconducting hybrids

Perpendicular magnetic anisotropy ferromagnetic/ superconducting (FM/SC) bilayers with a labyrinth domain structure are used to study nucleation of superconductivity on a fractal network, tunable through magnetic history. As clusters of reversed domains appear in the FM layer, the SC film shows a percolative behavior that depends on two independent processes: the arrangement of initial reversed domains and the fractal geometry of expanding clusters. For a full labyrinth structure, the behavior of the upper critical field is typical of confined superconductivity on a fractal network.Comment: 15 pages, 5 figure

Extracting clinical knowledge from electronic medical records

As the adoption of Electronic Medical Records (EMRs) rises in the healthcare institutions, these resources' importance increases because of the clinical information they contain about patients. However, the unstructured information in the form of clinical narratives present in those records, makes it hard to extract and structure useful clinical knowledge. This unstructured information limits the potential of the EMRs, because the clinical information these records contain can be used to perform important tasks inside healthcare institutions such as searching, summarization, decision support and statistical analysis, as well as be used to support management decisions or serve for research. These tasks can only be done if the unstructured clinical information from the narratives is properly extracted, structured and transformed in clinical knowledge. Usually, this extraction is made manually by healthcare practitioners, which is not efficient and is error-prone. This research uses Natural Language Processing (NLP) and Information Extraction (IE) techniques, in order to develop a pipeline system that can extract clinical knowledge from unstructured clinical information present in Portuguese EMRs, in an automated way, in order to help EMRs to fulfil their potential.info:eu-repo/semantics/publishedVersio

Spatial patterns and drivers of fire occurrence in a Mediterranean environment: a case study of southern Croatia.

Wildfires are an important factor of landscape dynamics in fire-prone environments of the world. In the Mediterranean, one of the most fire-susceptible environments globally, between 45,000 and 50,000 wildfires are recorded every year, causing disturbances in forest and grassland ecosystems. As a Mediterranean country, Croatia faces these problems, averaging over 1000 registered wildfires annually, with the coastal areas dominated by forest fires and continental Croatia by fires on agricultural lands. This research combines various landscape and socio-economic factors in the analysis of fire occurrence in Croatia’s southernmost region of Dalmatia. Around 275 of the largest fires (encompassing 98% of the total burnt area) registered in 2013 were investigated using OLS, and different spatial indices were employed to analyse regional variability in fire distribution. The results revealed that areas more prone to fires are the northern inland areas of Dalmatia and its entire coastal zone. Altitude and vegetation type demonstrated a correlation with fire occurrence, but an increase in population in the study area was also correlated with wildfire occurrence. Regarding vegetation, the grasslands and Mediterranean shrubland (maquis) were found to be the most fire-prone vegetation types in the study region, the distribution of which can be linked to different socio-economic and demographic processes occurring in the Eastern Adriatic

Extracting clinical information from electronic medical records

As the adoption of Electronic Medical Records (EMRs) rises in the healthcare institutions, these resources are each day more important because of the clinical data they contain about patients. However, the unstructured textual data in the form of narrative present in those records, makes it hard to extract and structure useful clinical information. This unstructured text limits the potential of the EMRs, because the clinical data these records contain, can be used to perform important operations inside healthcare institutions such as searching, summarization, decision support and statistical analysis, as well as be used to support management decisions or serve for research. These operations can only be done if the clinical data from the narratives is properly extracted and structured. Usually this extraction is made manually by healthcare practitioners, what is not efficient and is error-prone. The present work uses Natural Language Processing (NLP) and Information Extraction(IE) techniques in order to develop a pipeline system that can extract clinical information directly from unstructured texts present in Portuguese EMRs, in an automated way, in order to help EMRs to fulfil their potential.info:eu-repo/semantics/acceptedVersio

Platelets activate a pathogenic response to blood-stage Plasmodium infection but not a protective immune response

© 2017 by The American Society of Hematology. Clinical studies indicate that thrombocytopenia correlates with the development of severe falciparum malaria, suggesting that platelets either contribute to control of parasite replication, possibly as innate parasite killer cells or function in eliciting pathogenesis. Removal of platelets by anti-CD41 mAb treatment, platelet inhibition by aspirin, and adoptive transfer of wild-type (WT) platelets to CD40-KO mice, which do not control parasite replication, resulted in similar parasitemia compared with control mice. Human platelets at a physiologic ratio of 1 platelet to 9 red blood cells (RBCs) did not inhibit the in vitro development or replication of blood-stage Plasmodium falciparum. The percentage of Plasmodium-infected (iRBCs) with bound platelets during the ascending parasitemia in Plasmodium chabaudi- and Plasmodium berghei-infected mice and the 48-hour in vitro cycle of P falciparum was <10%. P chabaudi and P berghei iRBCs with apoptotic parasites (TdT1) exhibited minimal platelet binding (<5%), which was similar to nonapoptotic iRBCs. These findings collectively indicate platelets do not kill bloodstage Plasmodium at physiologically relevant effector-to-target ratios.Pchabaudi primary andsecondary parasitemiawassimilar in mice depleted of platelets by mAb-injection just before infection, indicating that activation of the protective immune response does not require platelets. In contrast to the lack of an effect on parasite replication, adoptive transfer ofWTplatelets to CD40-KOmice, which are resistant to experimental cerebral malaria, partially restored experimental cerebral malaria mortality and symptoms in CD40-KO recipients, indicating platelets elicit pathogenesis and platelet CD40 is a key molecule

Lake regionalization and diatom metacommunity structuring in tropical South America

Lakes and their topological distribution across Earth’s surface impose ecological and evolutionary constraints on aquatic metacommunities. In this study, we group similar lake ecosystems as metacommunity units influencing diatom community structure. We assembled a database of 195 lakes from the tropical Andes and adjacent lowlands (8°N–30°S and 58–79°W) with associated environmental predictors to examine diatom metacommunity patterns at two different levels: taxon and functional (deconstructed species matrix by ecological guilds). We also derived spatial variables that inherently assessed the relative role of dispersal. Using complementary multivariate statistical techniques (principal component analysis, cluster analysis, nonmetric multidimensional scaling, Procrustes, variance partitioning), we examined diatom–environment relationships among different lake habitats (sediment surface, periphyton, and plankton) and partitioned community variation to evaluate the influence of niche-and dispersal-based assembly processes in diatom metacommunity structure across lake clusters. The results showed a significant association between geographic clusters of lakes based on gradients of climate and landscape configuration and diatom assemblages. Six lake clusters distributed along a latitudinal gradient were identified as functional metacommunity units for diatom communities. Variance partitioning revealed that dispersal mechanisms were a major contributor to diatom metacommunity structure, but in a highly context-dependent fashion across lake clusters. In the Andean Altiplano and adjacent lowlands of Bolivia, diatom metacommunities are niche assembled but constrained by either dispersal limitation or mass effects, resulting from area, environmental heterogeneity, and ecological guild relationships. Topographic heterogeneity played an important role in structuring planktic diatom metacommunities. We emphasize the value of a guild-based metacommunity model linked to dispersal for elucidating mechanisms underlying latitudinal gradients in distribution. Our findings reveal the importance of shifts in ecological drivers across climatic and physiographically distinct lake clusters, providing a basis for comparison of broad-scale community gradients in lake-rich regions elsewhere. This may help guide future research to explore evolutionary constraints on the rich Neotropical benthic diatom species pool

Recurrent hypercortisolism after removal of an ACTH secretor pituitary adenoma associated with an adrenal macronodule

A 29 years old patient was sent to our Outpatient Clinic of Endocrinology presenting clinic of hypercortisolism. Laboratorial study: High urinary free cortisol (UFC); serum cortisol - 25 microg/dl (8 am) (5-25) and 20 microg/dL (11pm); ACTH - 20 pg/mL (9-52) (8 am) and 14 pg/mL (11 pm); serum cortisol after dexamethasone suppression test: 14,9 mg/dL; CRH test: elevation of ACTH; Pituitary MRI: microadenoma; abdominal CT: nodule on the left adrenal. During inferior petrosal sinus sampling with CRH stimulation, ACTH reached 368 pg/mL on the right and 136 pg/mL on the left side. The patient was submitted to transsphenoidal surgery. After surgery, hypertension and physical stigmata improved. In 2006, a relapse of Cushing syndrome was suspected due to worsening of hypertension and increase of weight. A slight increase of UFC, undetectable ACTH and serum cortisol after dexamethasone suppression test equal to 16 microg/dL were found. On abdominal CT, the adrenal nodule kept the same characteristics. In December 2006, the patient was submitted to left adrenalectomy. After surgery, blood pressure normalized, UFC and serum cortisol were reduced, needing substitutive therapy. Progressive tapering of hydrocortisone doses lead to discontinuation in March 2007. He is clinically well, without any treatment. This is an unusual case, in which after surgical cure of Cushing disease, secretory autonomy of a coexisting adrenal nodule occurred. This clinical case is relevant, pointing out the complexity of hypercortisolism cases and the need of long follow-up