31,322 research outputs found

    Elastic and plastic analysis of pressure vessel weld lands with mismatch

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    Elastic and plastic analysis of pressure vessel weld lands with mismatc

    Elastic and plastic stresses at weld sinkages and other discontinuities in pressure vessels

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    Mismatch and weld sinkage problems of pressure vessel geometric discontinuities studied in design graphs and test progra

    Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation

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    IndexaciĂłn: Web of Science.Using phylogenomic and gene compositional analyses, five highly conserved gene families have been detected in the core genome of the phylogenetically coherent genus Acidithiobacillus of the class Acidithiobacillia. These core gene families are absent in the closest extant genus Thermithiobacillus tepidarius that subtends the Acidithiobacillus genus and roots the deepest in this class. The predicted proteins encoded by these core gene families are not detected by a BLAST search in the NCBI non-redundant database of more than 90 million proteins using a relaxed cut-off of 1.0e(-5). None of the five families has a clear functional prediction. However, bioinformatic scrutiny, using pI prediction, motif/domain searches, cellular location predictions, genomic context analyses, and chromosome topology studies together with previously published transcriptomic and proteomic data, suggests that some may have functions associated with membrane remodeling during cell division perhaps in response to pH stress. Despite the high level of amino acid sequence conservation within each family, there is sufficient nucleotide variation of the respective genes to permit the use of the DNA sequences to distinguish different species of Acidithiobacillus, making them useful additions to the armamentarium of tools for phylogenetic analysis. Since the protein families are unique to the Acidithiobacillus genus, they can also be leveraged as probes to detect the genus in environmental metagenomes and metatranscriptomes, including industrial biomining operations, and acid mine drainage (AMD).http://journal.frontiersin.org/article/10.3389/fmicb.2016.02035/ful

    Encrypted statistical machine learning: new privacy preserving methods

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    We present two new statistical machine learning methods designed to learn on fully homomorphic encrypted (FHE) data. The introduction of FHE schemes following Gentry (2009) opens up the prospect of privacy preserving statistical machine learning analysis and modelling of encrypted data without compromising security constraints. We propose tailored algorithms for applying extremely random forests, involving a new cryptographic stochastic fraction estimator, and na\"{i}ve Bayes, involving a semi-parametric model for the class decision boundary, and show how they can be used to learn and predict from encrypted data. We demonstrate that these techniques perform competitively on a variety of classification data sets and provide detailed information about the computational practicalities of these and other FHE methods.Comment: 39 page

    Glass transitions and shear thickening suspension rheology

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    We introduce a class of simple models for shear thickening and/ or `jamming' in colloidal suspensions. These are based on schematic mode coupling theory (MCT) of the glass transition, having a memory term that depends on a density variable, and on both the shear stress and the shear rate. (Tensorial aspects of the rheology, such as normal stresses, are ignored for simplicity.) We calculate steady-state flow curves and correlation functions. Depending on model parameters, we find a range of rheological behaviours, including `S-shaped' flow curves, indicating discontinuous shear thickening, and stress-induced transitions from a fluid to a nonergodic (jammed) state, showing zero flow rate in an interval of applied stress. The shear thickening and jamming scenarios that we explore appear broadly consistent with experiments on dense colloids close to the glass transition, despite the fact that we ignore hydrodynamic interactions. In particular, the jamming transition we propose is conceptually quite different from various hydrodynamic mechanisms of shear thickening in the literature, although the latter might remain pertinent at lower colloid densities. Our jammed state is a stress-induced glass, but its nonergodicity transitions have an analytical structure distinct from that of the conventional MCT glass transition.Comment: 33 pages; 19 figure

    Lung lobe torsion in adult and juvenile pugs

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    This cases series of 13 pugs with lung lobe torsion (LLT) is the largest case series of pugs in the literature and the first to compare dogs presenting before and after 12 months of age. Similar to previous case series, the median age of pugs with LLT was 17 months; however six dogs were under 12 months of age (3 of 13 were 11–13 weeks at presentation). There were no differences between the dogs that presented younger or older than 12 months old with respect to sex, neuter status, lung lobe affected, duration and nature of clinical signs, time alive after discharge, and complications. The juvenile onset may suggest that some dogs are inherently at risk of LLT. This is intriguing and important as LLT may not be an intuitive diagnosis in a juvenile brachycephalic animal, and practitioners should be aware of this unusual presentation

    A robust and reliable optical trace oxygen sensor

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    Jamming transitions in a schematic model of suspension rheology

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    We study the steady-state response to applied stress in a simple scalar model of sheared colloids. Our model is based on a schematic (F2) model of the glass transition, with a memory term that depends on both stress and shear rate. For suitable parameters, we find transitions from a fluid to a nonergodic, jammed state, showing zero flow rate in an interval of applied stress. Although the jammed state is a glass, we predict that jamming transitions have an analytical structure distinct from that of the conventional mode coupling glass transition. The static jamming transition we discuss is also distinct from hydrodynamic shear thickening.Comment: 7 pages; 3 figures; improved version with added references. Accepted for publication in Europhysics Letter
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