G x E interactions on yield and quality in Coffea arabica: New F1 hybrids outperform American cultivars

Conventional American cultivars of coffee are no longer adapted to global warming. Finding highly productive and stable cultivars in different environments without neglecting quality characteristics has become a priority for breeders. In this study, new Arabica F1 hybrids clones were compared to conventional American varieties in seven contrasting environments, for yield, rust incidence and volume of the canopy. The quality was assessed through size, weight of 100 beans, biochemical analysis (24 aroma precursors and 31 volatiles compounds) and sensory analysis. Conventional varieties were the least productive, producing 50% less than the best hybrid. The AMMI model analysis pointed out five hybrids as the most stable and productive. Two F1 hybrids clones, H1-Centroamericano and H16-Mundo Maya, were superior to the most planted American cultivar in Latin and Central America showing a high yield performance and stability performance. H1-Centroamerica and Starmaya contain more d-limonene than Caturra, while Starmaya contain more 3-methylbutanoic acid than the control. Those two latter volatiles compounds are linked with good cup quality in previous studies. In terms of sensory analysis, Starmaya and H1-Centroamericano scored better than control

GC-MS aroma characterization of vegetable matrices: Focus on 3-alkyl-2-methoxypyrazines

3-Alkyl-2-methoxypyrazines (MPs) are a very important class of volatile organic compounds (VOCs), intensively characterizing the aroma of several food products including fruits and vegetables. Due to the very low orthonasal sensory threshold, low amounts of MPs may act as key positive or negative aroma compounds. The analysis of these volatiles in foods is then remarkably important, and it may be very challenging as confirmed by the scarce literature focused on MPs, particularly with respect to quantitative data. In the attempt to fill this gap, in this work, presence and quantification of MPs in four different vegetables, namely, green bell pepper (Capsicum annuum L. var grossum), green pea (Pisum sativum L. and Pisum spp), carrot (Daucus carota subsp sativus), and cucumber (Cucumis sativus L.) have been investigated. Two different volatile extraction techniques (solid phase microextraction [SPME] and simultaneous distillation-extraction [SDE]) in conjunction with VOC qualitative analysis by gas chromatography-mass spectrometry (GC-MS) methods were applied. Solid phase microextraction coupled with GC-MS in single ion monitoring (SIM) mode showed the best performances in sensitivity to detect MPs on the different vegetable matrices. Therefore, a headspace (HS) SPME-GC-MS quantitative method was developed and optimized, and dominant MPs quantified. 3-Isopropyl-2-methoxypyrazine (IPMP), 3- sec-butyl-2-methoxypyrazine (sBMP), and 3-isobutyl-2-methoxypyrazine (IBMP) have been detected and quantified in all the vegetables. 3-Isopropyl-2-methoxypyrazine was the prevalent MP in peas and cucumber while IBMP in bell pepper. These MPs were detected for the first time in carrot and cucumber. Finally, sBMP has been confirmed to be the most important MP in carrot. The developed method allowed to characterize the VOC pattern and, in particular, to quantify MPs in four vegetables. Results highlight the feasibility of further applications of the analytical approach to determine MPs in other food matrices where an excessive amount of these aromas may negatively affect their flavor (eg, coffee)

The spent culture supernatant of Pseudomonas syringae contains azelaic acid

Abstract Background Pseudomonas syringae pv. actinidiae (PSA) is an emerging kiwifruit bacterial pathogen which since 2008 has caused considerable losses. No quorum sensing (QS) signaling molecule has yet been reported from PSA and the aim of this study was to identify possible intercellular signals produced by PSA. Results A secreted metabolome analysis resulted in the identification of 83 putative compounds, one of them was the nine carbon saturated dicarboxylic acid called azelaic acid. Azelaic acid, which is a nine-carbon (C9) saturated dicarboxylic acid, has been reported in plants as a mobile signal that primes systemic defenses. In addition, its structure,(which is associated with fatty acid biosynthesis) is similar to other known bacterial QS signals like the Diffusible Signal Facor (DSF). For these reason it could be acting as s signal molecule. Analytical and structural studies by NMR spectroscopy confirmed that in PSA spent supernatants azelaic acid was present. Quantification studies further revealed that 20 μg/L of were present and was also found in the spent supernatants of several other P. syringae pathovars. The RNAseq transcriptome study however did not determine whether azelaic acid could behave as a QS molecule. Conclusions This study reports of the possible natural biosynthesis of azelaic acid by bacteria. The production of azelaic acid by P. syringae pathovars can be associated with plant-bacteria signaling

Rice Husk as an Inexpensive Renewable Immobilization Carrier for Biocatalysts Employed in the Food, Cosmetic and Polymer Sectors

The high cost and environmental impact of fossil-based organic carriers represent a critical bottleneck to their use in large-scale industrial processes. The present study demonstrates the applicability of rice husk as inexpensive renewable carrier for the immobilization of enzymes applicable sectors where the covalent anchorage of the protein is a pre-requisite for preventing protein contamination while assuring the recyclability. Rice husk was oxidized and then functionalized with a di-amino spacer. The morphological characterization shed light on the properties that affect the functionalization processes. Lipase B from Candida antarctica (CaLB) and two commercial asparaginases were immobilized covalently achieving higher immobilization yield than previously reported. All enzymes were immobilized also on commercial epoxy methacrylic resins and the CaLB immobilized on rice husk demonstrated a higher efficiency in the solvent-free polycondensation of dimethylitaconate. CaLB on rice husk appears particularly suitable for applications in highly viscous processes because of the unusual combination of its low density and remarkable mechanical robustness. In the case of the two asparaginases, the biocatalyst immobilized on rice husk performed in aqueous solution at least as efficiently as the enzyme immobilized on methacrylic resins, although the rice husk loaded a lower amount of protein

Genetic-environment interactions and climatic variables effect on bean physical characteristics and chemical composition of Coffea arabica

International audienceBACKGROUND: The effects of the environment and genotype in the coffee bean chemical composition were studied using 9 trials covering an altitudinal gradient (600-1100m.a.s.l) with 3 genotypes of Coffea arabica in the Northwest mountainous region of Vietnam. The impacts of the climatic conditions on bean physical characteristics and chemical composition were assessed.RESULTS: We showed that the environment had a significant effect on the bean density and on all bean chemical compounds. The environment effect was stronger than the genotype and genotype-environment interaction effects for cafestol, kahweol, arachidic (C20:0), behenic acid (C22:0), 2,3-butanediol, 2-methyl-2-buten-1-ol, benzaldehyde, benzene ethanol, butyrolactone, decane, dodecane, ethanol, pentanoic acid, and phenylacetaldehyde bean content. A 2°C increase in temperature had more influence on bean chemical compounds than a 100mm increase in soil water content. Temperature was positively correlated with lipids and volatile compounds. With an innovative method using iterative moving averages, we showed that correlation of temperature, VPD and rainfall with lipids and volatiles was higher between the 10th and 20th weeks after flowering highlighting this period as crucial for the synthesis of these chemicals. Genotype specific responses were evidenced and could be considered in future breeding programs to maintain coffee beverage quality in the midst of climate change.CONCLUSION: This first study of the effect of the genotype-environment interactions on chemical compounds enhances our understanding of the sensitivity of coffee quality to genotype environment interactions during bean development. This work addresses the growing concern of the effect of climate change on speciality crops and more specifically coffee