Characterizing genomic alterations in cancer by complementary functional associations.

Systematic efforts to sequence the cancer genome have identified large numbers of mutations and copy number alterations in human cancers. However, elucidating the functional consequences of these variants, and their interactions to drive or maintain oncogenic states, remains a challenge in cancer research. We developed REVEALER, a computational method that identifies combinations of mutually exclusive genomic alterations correlated with functional phenotypes, such as the activation or gene dependency of oncogenic pathways or sensitivity to a drug treatment. We used REVEALER to uncover complementary genomic alterations associated with the transcriptional activation of β-catenin and NRF2, MEK-inhibitor sensitivity, and KRAS dependency. REVEALER successfully identified both known and new associations, demonstrating the power of combining functional profiles with extensive characterization of genomic alterations in cancer genomes

What difference does a thiophene make? Evaluation of a 4,4′-bis(thiophene) functionalised 2,2′-bipyridyl copper(I) complex in a dye-sensitized solar cell

AbstractThe synthesis of a 4,4′-bis(2-thienyl-5-carboxylic acid) functionalised 2,2′-bipyridine ligand and corresponding copper(I) complex is described and its application in a dye-sensitized solar cell (DSSC) is studied. The positioning of the thiophene groups appears favourable from DFT analysis and a best efficiency of 1.41% was obtained with this dye, for a 0.3 cm2 cell area DSSC. Two absorbance bands are observed in the electronic absorption spectrum of the copper(I) complex at 316 nm and 506 nm, with ε values of 50,000 M−1 cm−1 and 9030 M−1 cm−1, respectively. Cyclic voltammetry and electrochemical impedance spectroscopy are also used to provide a detailed analysis of the dye and assess its functionality in a DSSC