Rigid open-cell polyurethane foam for cryogenic insulation

Lightweight polyurethane foam assembled in panels is effective spacer material for construction of self-evacuating multilayer insulation panels for cryogenic liquid tanks. Spacer material separates radiation shields with barrier that minimizes conductive and convective heat transfer between shields

Genetic Structure of Midwestern \u3ci\u3eAscaris suum\u3c/i\u3e Populations: A Comparison of Isoenzyme and RAPD Markers

Isoenzyme and random amplified polymorphic DNA (RAPD) markers were used to characterize the genetics of geographic variation among population samples of Ascaris suum from midwestern localities. Independent estimates of fixation indices (FST) based on isoenzyme and RAPD markers showed the same general patterns of differentiation and substantial statistical correlation (r=0.70). Of the total estimated gene diversity, 9.4% (isoenzyme) and 9.2% (RAPD) was distributed among infrapopulations. Geographic localities accounted for 7.8% (isoenzyme) and 6.2% (RAPD) of the total gene diversity. Only infrapopulations and localities, which indicates significant population subdivision among A. suum from farms within geographic regions. Departures from random mating were revealed by deficiencies of heterozygotes within infrapopulations and by high positive values of FIS among and between infrapopulations. The average inbreeding (FIS) coefficient among all infrapopulations was 0.22. Thus, the genetic composition of these A. suum infrapopulations, whether from a general geographic region or a single farm, was not consistent with a model of random recruitment from a larger panmictic pool of parasite life cycle stages

A methodology for the structural and functional analysis of signaling and regulatory networks

BACKGROUND: Structural analysis of cellular interaction networks contributes to a deeper understanding of network-wide interdependencies, causal relationships, and basic functional capabilities. While the structural analysis of metabolic networks is a well-established field, similar methodologies have been scarcely developed and applied to signaling and regulatory networks. RESULTS: We propose formalisms and methods, relying on adapted and partially newly introduced approaches, which facilitate a structural analysis of signaling and regulatory networks with focus on functional aspects. We use two different formalisms to represent and analyze interaction networks: interaction graphs and (logical) interaction hypergraphs. We show that, in interaction graphs, the determination of feedback cycles and of all the signaling paths between any pair of species is equivalent to the computation of elementary modes known from metabolic networks. Knowledge on the set of signaling paths and feedback loops facilitates the computation of intervention strategies and the classification of compounds into activators, inhibitors, ambivalent factors, and non-affecting factors with respect to a certain species. In some cases, qualitative effects induced by perturbations can be unambiguously predicted from the network scheme. Interaction graphs however, are not able to capture AND relationships which do frequently occur in interaction networks. The consequent logical concatenation of all the arcs pointing into a species leads to Boolean networks. For a Boolean representation of cellular interaction networks we propose a formalism based on logical (or signed) interaction hypergraphs, which facilitates in particular a logical steady state analysis (LSSA). LSSA enables studies on the logical processing of signals and the identification of optimal intervention points (targets) in cellular networks. LSSA also reveals network regions whose parametrization and initial states are crucial for the dynamic behavior. We have implemented these methods in our software tool CellNetAnalyzer (successor of FluxAnalyzer) and illustrate their applicability using a logical model of T-Cell receptor signaling providing non-intuitive results regarding feedback loops, essential elements, and (logical) signal processing upon different stimuli. CONCLUSION: The methods and formalisms we propose herein are another step towards the comprehensive functional analysis of cellular interaction networks. Their potential, shown on a realistic T-cell signaling model, makes them a promising tool

Stuffed Black Holes

Initial data corresponding to spacetimes containing black holes are considered in the time symmetric case. The solutions are obtained by matching across the apparent horizon different, conformally flat, spatial metrics. The exterior metric is the vacuum solution obtained by the well known conformal imaging method. The interior metric for every black hole is regular everywhere and corresponds to a positive energy density. The resulting matched solutions cover then the whole initial (Cauchy) hypersurface, without any singularity, and can be useful for numerical applications. The simpler cases of one black hole (Schwarzschild data) or two identical black holes (Misner data) are explicitly solved. A procedure for extending this construction to the multiple black hole case is also given, and it is shown to work for all time symmetric vacuum solutions obtained by the conformal imaging method. The numerical evolution of one such 'stuffed' black hole is compared with that of a pure vacuum or 'plain' black hole in the spherically symmetric case.Comment: 12 pages, Latex, 4 postscript figures, corrected some typos, new section about physical interpretatio

Inference with interference between units in an fMRI experiment of motor inhibition

An experimental unit is an opportunity to randomly apply or withhold a treatment. There is interference between units if the application of the treatment to one unit may also affect other units. In cognitive neuroscience, a common form of experiment presents a sequence of stimuli or requests for cognitive activity at random to each experimental subject and measures biological aspects of brain activity that follow these requests. Each subject is then many experimental units, and interference between units within an experimental subject is likely, in part because the stimuli follow one another quickly and in part because human subjects learn or become experienced or primed or bored as the experiment proceeds. We use a recent fMRI experiment concerned with the inhibition of motor activity to illustrate and further develop recently proposed methodology for inference in the presence of interference. A simulation evaluates the power of competing procedures.Comment: Published by Journal of the American Statistical Association at http://www.tandfonline.com/doi/full/10.1080/01621459.2012.655954 . R package cin (Causal Inference for Neuroscience) implementing the proposed method is freely available on CRAN at https://CRAN.R-project.org/package=ci

Increased weed diversity, density and above-ground biomass in long-term organic crop rotations

While weed management is consistently a top priority among farmers, there is also growing concern for the conservation of biodiversity. Maintaining diverse weed communities below bioeconomic thresholds may provide ecosystem services for the crop and the surrounding ecosystem. This study was conducted to determine if weed diversity, density and biomass differ within and among organic and conventional crop rotations. In 2007 and 2008, we sampled weed communities in four long-term crop rotations near Mead, Nebraska using seedbank analyses (elutriation and greenhouse emergence) and above-ground biomass sampling. Two conventional crop rotations consisted of a corn (Zea mays) or sorghum (Sorghum bicolor)–soybean (Glycine max)–sorghum or corn–soybean sequence and a diversified corn or sorghum–sorghum or corn– soybean–wheat (Triticum aestivum) sequence. Two organic rotations consisted of an animal manure-based soybean–corn or sorghum–soybean–wheat sequence and a green manure-based alfalfa (Medicago sativa)–alfalfa–corn or sorghum–wheat sequence. Species diversity of the weed seedbank and the above-ground weed community, as determined by the Shannon diversity index, were greatest in the organic green manure rotation. Averaged across all sampling methods and years, the weed diversity index of the organic green manure rotation was 1.07, followed by the organic animal manure (0.78), diversified conventional (0.76) and conventional (0.66) rotations. The broadleaf weed seedbank density in the tillage layer of the organic animal manure rotation was 1.4x, 3.1x and 5.1x greater than the organic green manure, diversified conventional and conventional rotations, respectively. The grass weed seedbank density in the tillage layer of the organic green manure rotation was 2.0x, 6.1x and 6.4x greater than the organic animal manure, diversified conventional and conventional rotations, respectively. The above-ground weed biomass was generally greatest in the organic rotations. The broadleaf weed biomass in sorghum and wheat did not differ between organic and conventional rotations (CRs), but grass weed biomass was greater in organic compared to CRs for all crops. The above-ground weed biomass did not differ within CRs, and within organic rotations the grass weed biomass was generally greatest in the organic green manure rotation. The weed seedbank and above-ground weed communities that have accumulated in these rotations throughout the experiment suggest a need for greater management in long-term organic rotations that primarily include annual crops. However, results suggest that including a perennial forage crop in organic rotations may reduce broadleaf weed seedbank populations and increase weed diversity

Heat shock factor 1 regulates lifespan as distinct from disease onset in prion disease

Prion diseases are fatal, transmissible, neurodegenerative diseases caused by the misfolding of the prion protein (PrP). At present, the molecular pathways underlying prion-mediated neurotoxicity are largely unknown. We hypothesized that the transcriptional regulator of the stress response, heat shock factor 1 (HSF1), would play an important role in prion disease. Uninoculated HSF1 knockout (KO) mice used in our study do not show signs of neurodegeneration as assessed by survival, motor performance, or histopathology. When inoculated with Rocky Mountain Laboratory (RML) prions HSF1 KO mice had a dramatically shortened lifespan, succumbing to disease ≈20% faster than controls. Surprisingly, both the onset of home-cage behavioral symptoms and pathological alterations occurred at a similar time in HSF1 KO and control mice. The accumulation of proteinase K (PK)-resistant PrP also occurred with similar kinetics and prion infectivity accrued at an equal or slower rate. Thus, HSF1 provides an important protective function that is specifically manifest after the onset of behavioral symptoms of prion disease

Control of acetolactate synthase inhibitor/glyphosate-resistant Palmer amaranth (Amaranthus palmeri) in isoxaflutole/glufosinate/glyphosate-resistant soybean

Palmer amaranth is the most problematic and troublesome weed in agronomic cropping systems in the United States. Acetolactate synthase (ALS) inhibitor and glyphosate-resistant (GR) Palmer amaranth has been confirmed in Nebraska and it is widespread in several counties. Soybean resistant to isoxaflutole/glufosinate/glyphosate has been developed that provides additional herbicide site of action for control of herbicide-resistant weeds. The objectives of this study were to evaluate herbicide programs for control of ALS inhibitor/GR Palmer amaranth and their effect on Palmer amaranth density and biomass, as well as soybean injury and yield in isoxaflutole/glufosinate/glyphosate-resistant soybean. Field experiments were conducted in a grower\u27s field infested with ALS inhibitor and GR Palmer amaranth near Carleton, Nebraska, in 2018 and 2019. Isoxaflutole applied alone or mixed with sulfentrazone/pyroxasulfone, flumioxazin/pyroxasulfone, or imazethapyr/saflufenacil/pyroxasulfone provided similar control (86%-99%) of Palmer amaranth 21 d after PRE (DAPRE). At 14 d after early-POST (DAEPOST), isoxaflutole applied PRE and PRE followed by (fb) POST controlled Palmer amaranth by 10% to 63% compared to 75% to 96% control with glufosinate applied EPOST in both years. A PRE herbicide fb glufosinate controlled Palmer amaranth 80% to 99% 21 d after late-POST (DALPOST) in 2018, and reduced density 89% to 100% in 2018 and 58% to 100% in 2019 at 14 DAEPOST. No soybean injury was observed from any of the herbicide programs tested in this study. Soybean yield in 2019 was relatively higher due to higher precipitation compared with 2018 with generally no differences between herbicide programs. This research indicates that herbicide programs are available for effective control of ALS inhibitor/GR Palmer amaranth in isoxaflutole/glufosinate/glyphosate-resistant soybean

Dissipative fluids out of hydrostatic equilibrium

In the context of the M\"{u}ller-Israel-Stewart second order phenomenological theory for dissipative fluids, we analyze the effects of thermal conduction and viscosity in a relativistic fluid, just after its departure from hydrostatic equilibrium, on a time scale of the order of relaxation times. Stability and causality conditions are contrasted with conditions for which the ''effective inertial mass'' vanishes.Comment: 21 pages, 1 postscript figure (LaTex 2.09 and epsfig.sty required) Submitted to Classical and Quantum Gravit

Seed production of barnyardgrass (Echinochloa crus-galli) in response to time of emergence in cotton and rice

The spread of herbicide resistance in barnyardgrass (Echinochloa crus-galli (L.) Beauv.) poses a serious threat to crop production in the southern United States. A thorough knowledge of the biology of barnyardgrass is fundamental for designing effective resistance-management programmes. In the present study, seed production of barnyardgrass in response to time of emergence was investigated in cotton and rice, respectively, in Fayetteville and Rohwer, Arkansas, over a 2-year period (2008–09). Barnyardgrass seed production was greater when seedlings emerged with the crop, but some seed production was observed even if seedlings emerged several weeks after crop emergence. Moreover, barnyardgrass seed production was highly variable across environments. When emerging with the crop (0 weeks after crop emergence (WAE)), barnyardgrass produced c. 35 500 and 16 500 seeds/plant in cotton, and c. 39 000 and 2900 seeds/plant in rice, in 2008 and 2009, respectively. Seed production was observed when seedlings emerged up to 5 WAE (2008) or 7 WAE (2009) in cotton and up to 5 WAE (2008, 2009) in rice; corresponding seed production was c. 2500 and 1500 seeds/plant in cotton, and c. 14 700 and 110 seeds/plant in rice, in 2008 and 2009, respectively. The results suggest that cultural approaches that delay the emergence of barnyardgrass or approaches that make the associated crop more competitive will be useful in integrated management programmes. In the context of herbicide resistance management, it may be valuable to prevent seed return to the seedbank, irrespective of cohorts. The findings are vital for parameterizing herbicide resistance simulation models for barnyardgrass