Adsorption of a binary mixture of monomers with nearest-neighbour cooperative effects

A model for the adsorption of a binary mixture on a one-dimensional infinite lattice with nearest neighbour cooperative effects is considered. The particles of the two species are both monomers but differ in the repulsive interaction experienced by them when trying to adsorb. An exact expression for the coverage of the lattice is derived. In the jamming limit, it is a monotonic function of the ratio between the attempt frequencies of the two species, varying between the values corresponding to each of the two single species. This is in contrast with the results obtained in other models for the adsorption of particles of different sizes. The structure of the jamming state is also investigated.Comment: v2: Errors in the figures fixed; same text; 23 pages, 5 figures. Accepted for publication in Journal of Physics A: Mathematical and Genera

Triggering with the LHCb calorimeters

on behalf of the LHCb collaborationInternational audienc

Structural properties of silicon dioxide thin films densified by medium-energy particles

Classical molecular-dynamics simulations have been carried out to investigate densification mechanisms in silicon dioxide thin films deposited on an amorphous silica surface, according to a simplified ion-beam assisted deposition (IBAD) scenario. We compare the structures resulting from the deposition of near-thermal (1 eV) SiO$_{2}$ particles to those obtained with increasing fraction of 30 eV SiO$_{2}$ particles. Our results show that there is an energy interval - between 12 and 15 eV per condensing SiO$_2$ unit on average - for which the growth leads to a dense, low-stress amorphous structure, in satisfactory agreement with the results of low-energy ion-beam experiments. We also find that the crossover between low- and high-density films is associated with a tensile to compressive stress transition, and a simultaneous healing of structural defects of the {\em a-}SiO$_2$ network, namely three- and four-fold rings. It is observed, finally, that densification proceeds through significant changes at intermediate length scales (4--10 \AA), leaving essentially unchanged the ``building blocks'' of the network, viz. the Si(O$_{1/2}$)$_{4}$ tetrahedra. This latter result is in qualitative agreement with the mechanism proposed to explain the irreversible densification of amorphous silica recovered from high pressures ($\sim$ 15--20 GPa).Comment: 12 pages including 10 postscript figures; submitted to Phys. Rev. B; related publications can be found on web site http://www.centrcn.umontreal.ca/~lewi

SigTree: A Microbial Community Analysis Tool to Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree.

Microbial community analysis experiments to assess the effect of a treatment intervention (or environmental change) on the relative abundance levels of multiple related microbial species (or operational taxonomic units) simultaneously using high throughput genomics are becoming increasingly common. Within the framework of the evolutionary phylogeny of all species considered in the experiment, this translates to a statistical need to identify the phylogenetic branches that exhibit a significant consensus response (in terms of operational taxonomic unit abundance) to the intervention. We present the R software package SigTree, a collection of flexible tools that make use of meta-analysis methods and regular expressions to identify and visualize significantly responsive branches in a phylogenetic tree, while appropriately adjusting for multiple comparisons

Atomic Modeling of Photoionization Fronts in Nitrogen Gas

Photoionization fronts play a dominant role in many astrophysical environments, but remain difficult to achieve in a laboratory experiment. Recent papers have suggested that experiments using a nitrogen medium held at ten atmospheres of pressure that is irradiated by a source with a radiation temperature of T$_{\rm R}\sim$ 100 eV can produce viable photoionization fronts. We present a suite of one-dimensional numerical simulations using the \helios\ multi-material radiation hydrodynamics code that models these conditions and the formation of a photoionization front. We study the effects of varying the atomic kinetics and radiative transfer model on the hydrodynamics and ionization state of the nitrogen gas, finding that more sophisticated physics, in particular a multi-angle long characteristic radiative transfer model and a collisional-radiative atomics model, dramatically changes the atomic kinetic evolution of the gas. A photoionization front is identified by computing the ratios between the photoionization rate, the electron impact ionization rate, and the total recombination rate. We find that due to the increased electron temperatures found using more advanced physics that photoionization fronts are likely to form in our nominal model. We report results of several parameter studies. In one of these, the nitrogen pressure is fixed at ten atmospheres and varies the source radiation temperature while another fixes the temperature at 100 eV and varied the nitrogen pressure. Lower nitrogen pressures increase the likelihood of generating a photoionization front while varying the peak source temperature has little effect.Comment: 17 pages, 10 figures, accepted to physics of plasma

The Level 0 Trigger Decision Unit for the LHCb experiment

The Level 0 Decision Unit (L0DU) is one of the main components of the first trigger level (named level 0) of the LHCb experiment. This 16 layers custom board receives data from the calorimeter, muon and pile-up sub-triggers and computes the level 0 decision, reducing the rate from 40MHz to 1MHz. The processing is implemented in FPGA using a 40MHz synchronous pipelined architecture. The L0DU algorithm is fully configured via the Experiment Control System without any firmware reprogramming. An overall L0DU latency of less than 450ns has been achieved. The board was installed in the experimental area in April 2007 and since then has played a major role in the commissioning of the experiment