Rice cultivar \u27Banks\u27

A rice cultivar designated ‘Banks’ is disclosed. The invention relates to the seeds of rice cultivar ‘Banks’, to the plants of rice ‘Banks’ and to methods for producing a rice plant produced by crossing the cultivar ‘Banks’ with itself or another rice variety. The invention further relates to hybrid rice seeds and plants produced by crossing the cultivar ‘Banks’ with another rice cultivar

Rice cultivar \u27Francis\u27

A novel rice cultivar, designated ‘Francis’, is disclosed. The invention relates to the seeds of rice cultivar ‘Francis’, to the plants of rice ‘Francis’ and to methods for producing a rice plant produced by crossing the cultivar ‘Francis’ with itself or another rice variety. The invention further relates to hybrid rice seeds and plants produced by crossing the cultivar ‘Francis’ with another rice cultivar

Rice cultivar ‘Ahrent’

A novel rice cultivar, designated ‘Ahrent’, is disclosed. The invention relates to the seeds of rice cultivar ‘Ahrent’, to the plants of rice ‘Ahrent’ and to methods for producing a rice plant produced by crossing the cultivar ‘Ahrent’ with itself or another rice variety. The invention further relates to hybrid rice seeds and plants produced by crossing the cultivar ‘Ahrent’ with another rice cultivar

Rice cultivar \u27Ahrent\u27

A novel rice cultivar, designated ‘Ahrent’, is disclosed. The invention relates to the seeds of rice cultivar ‘Ahrent’, to the plants of rice ‘Ahrent’ and to methods for producing a rice plant produced by crossing the cultivar ‘Ahrent’ with itself or another rice variety. The invention further relates to hybrid rice seeds and plants produced by crossing the cultivar ‘Ahrent’ with another rice cultivar

Rice cultivar \u27Spring\u27

A rice cultivar designated ‘Spring’ is disclosed. The invention relates to the seeds of rice cultivar ‘Spring’, to the plants of rice ‘Spring’ and to methods for producing a rice plant produced by crossing the cultivar ‘Spring’ with itself or another rice variety. The invention further relates to hybrid rice seeds and plants produced by crossing the cultivar ‘Spring’ with another rice cultivar

Serological detection and identification of rice blast

Monoclonal antibodies (MAbs) useful in the serological detection and identification of rice blast were produced by hybridoma cells formed from fusions of myeloma cells with splenocytes from BALB/c mice immunized with an extract of a liquid culture fluid of an isolate of Pyricularia grisea race IB-49. These MAbs reacted similarly with the antigens in various serological techniques used, and did not cross react with any unrelated fungal isolates representing 11 genera, but reacted positively with all 20 races or isolates of P. grisea. The MAbs could detect homologous antigen at about 60 ng fungal protein/ml and a 5-fold dilution of the extracts of infected rice tissue by ELISA. In accordance with another embodiment of the present invention, hybridoma lines secreting antibodies positive for the immunogen and negative for healthy rice tissue were selected from three independent fusions of NS-1 myeloma cells with splenocytes from mice immunized with crushed conidial suspensions of P. grisea race IB-49. MAbs secreted from cell line 4G11, deposited with ATCC as HB11178, reacted strongly with conidial antigen. In cross-reaction tests with ELISA, MAb 4G11 reacted negatively with isolates representing 11 fungal genera and reacted positively with 11 and 12 isolates of P. grisea in ELISA and IFA, respectively. MAb 4G11 could detect homologous conidial antigen at 14-70 ng/ml, 10-20 conidia/well, and the fungal antigen in infected rice tissue in ELISA

Seeing Tree Structure from Vibration

Humans recognize object structure from both their appearance and motion; often, motion helps to resolve ambiguities in object structure that arise when we observe object appearance only. There are particular scenarios, however, where neither appearance nor spatial-temporal motion signals are informative: occluding twigs may look connected and have almost identical movements, though they belong to different, possibly disconnected branches. We propose to tackle this problem through spectrum analysis of motion signals, because vibrations of disconnected branches, though visually similar, often have distinctive natural frequencies. We propose a novel formulation of tree structure based on a physics-based link model, and validate its effectiveness by theoretical analysis, numerical simulation, and empirical experiments. With this formulation, we use nonparametric Bayesian inference to reconstruct tree structure from both spectral vibration signals and appearance cues. Our model performs well in recognizing hierarchical tree structure from real-world videos of trees and vessels.Comment: ECCV 2018. The first two authors contributed equally to this work. Project page: http://tree.csail.mit.edu

Search for the lepton-family-number nonconserving decay \mu -> e + \gamma

The MEGA experiment, which searched for the muon- and electron-number violating decay \mu -> e + \gamma, is described. The spectrometer system, the calibrations, the data taking procedures, the data analysis, and the sensitivity of the experiment are discussed. The most stringent upper limit on the branching ratio of \mu -> e + \gamma) < 1.2 x 10^{-11} was obtained

M2 Macrophages Activate WNT Signaling Pathway in Epithelial Cells: Relevance in Ulcerative Colitis

Macrophages, which exhibit great plasticity, are important components of the inflamed tissue and constitute an essential element of regenerative responses. Epithelial Wnt signalling is involved in mechanisms of proliferation and differentiation and expression of Wnt ligands by macrophages has been reported. We aim to determine whether the macrophage phenotype determines the expression of Wnt ligands, the influence of the macrophage phenotype in epithelial activation of Wnt signalling and the relevance of this pathway in ulcerative colitis. Human monocyte-derived macrophages and U937-derived macrophages were polarized towards M1 or M2 phenotypes and the expression of Wnt1 and Wnt3a was analyzed by qPCR. The effects of macrophages and the role of Wnt1 were analyzed on the expression of β-catenin, Tcf-4, c-Myc and markers of cell differentiation in a co-culture system with Caco-2 cells. Immunohistochemical staining of CD68, CD206, CD86, Wnt1, β-catenin and c-Myc were evaluated in the damaged and non-damaged mucosa of patients with UC. We also determined the mRNA expression of Lgr5 and c-Myc by qPCR and protein levels of β-catenin by western blot. Results show that M2, and no M1, activated the Wnt signaling pathway in co-culture epithelial cells through Wnt1 which impaired enterocyte differentiation. A significant increase in the number of CD206+ macrophages was observed in the damaged mucosa of chronic vs newly diagnosed patients. CD206 immunostaining co-localized with Wnt1 in the mucosa and these cells were associated with activation of canonical Wnt signalling pathway in epithelial cells and diminution of alkaline phosphatase activity. Our results show that M2 macrophages, and not M1, activate Wnt signalling pathways and decrease enterocyte differentiation in co-cultured epithelial cells. In the mucosa of UC patients, M2 macrophages increase with chronicity and are associated with activation of epithelial Wnt signalling and diminution in enterocyte differentiation

Global gene expression analysis in time series following N-acetyl L-cysteine induced epithelial differentiation of human normal and cancer cells in vitro

BACKGROUND: Cancer prevention trials using different types of antioxidant supplements have been carried out at several occasions and one of the investigated compounds has been the antioxidant N-acetyl-L-cysteine (NAC). Studies at the cellular level have previously demonstrated that a single supplementation of NAC induces a ten-fold more rapid differentiation in normal primary human keratinocytes as well as a reversion of a colon carcinoma cell line from neoplastic proliferation to apical-basolateral differentiation [1]. The investigated cells showed an early change in the organization of the cytoskeleton, several newly established adherens junctions with E-cadherin/β-catenin complexes and increased focal adhesions, all features characterizing the differentiation process. METHODS: In order to investigate the molecular mechanisms underlying the proliferation arrest and accelerated differentiation induced by NAC treatment of NHEK and Caco-2 cells in vitro, we performed global gene expression analysis of NAC treated cells in a time series (1, 12 and 24 hours post NAC treatment) using the Affymetrix GeneChip™ Human Genome U95Av2 chip, which contains approximately 12,000 previously characterized sequences. The treated samples were compared to the corresponding untreated culture at the same time point. RESULTS: Microarray data analysis revealed an increasing number of differentially expressed transcripts over time upon NAC treatment. The early response (1 hour) was transient, while a constitutive trend was commonly found among genes differentially regulated at later time points (12 and 24 hours). Connections to the induction of differentiation and inhibition of growth were identified for a majority of up- and down-regulated genes. All of the observed transcriptional changes, except for seven genes, were unique to either cell line. Only one gene, ID-1, was mutually regulated at 1 hour post treatment and might represent a common mediator of early NAC action. The detection of several genes that previously have been identified as stimulated or repressed during the differentiation of NHEK and Caco-2 provided validation of results. In addition, real-time kinetic PCR analysis of selected genes also verified the differential regulation as identified by the microarray platform. CONCLUSION: NAC induces a limited and transient early response followed by a more consistent and extensively different expression at later time points in both the normal and cancer cell lines investigated. The responses are largely related to inhibition of proliferation and stimulation of differentiation in both cell types but are almost completely lineage specific. ID-1 is indicated as an early mediator of NAC action