Laser-induced breakdown spectroscopy of cyanobacteria in carbonate matrices under simulated Martian environment

The finding on the Martian surface of hydrated salt minerals, like carbonates and sulphates, and their interpretation as deriving from the desiccation of old bodies of water, has provided an evidence of liquid water activity on the surface of Mars [1]. These evaporite environments and their saline deposits are now a chief goal for planetary missions devoted to the search for fossil Martian life. Such minerals have the possibility of trapping and preserving over geologic times a biological record made up of halophilic extremophiles [1]. The existence of species of cyanobacteria that inhabit rock substrates on Earth, capable of growing in environments considered extreme, makes them ideal organisms for studying biological responses in different environmental conditions [2]. One possible organism detection strategy consists in the study of the most relevant emission lines and molecular bands attributed to presence of life by laser-induced breakdown spectroscopy (LIBS). However, the detection of these species can be complex as LIBS is sensitive to environmental conditions, such as the atmosphere composition and pressure, and could contribute to this signal [3]. In the present study, several species of cyanobacteria with dissimilar extremophilic characteristics [4] (tolerance to desiccation and salinity) were examined by LIBS. The identification and discrimination of cyanobacteria on carbonate substrates was based on organic signal emissions (C, C2, CN...) and the presence of other microelements (Fe, Si, Cu, K…). For this purpose, and to evaluate the influence of the surrounding atmosphere on the plasma composition and its contribution on LIBS signal, a set of samples including Arthrospira platensis (commercial), Microcystys aeruginosa (cultured) and Chroococcidiopsis sp. (natural samples) was analyzed under i) Mars-analogue atmosphere and ii) low air vacuum (7mbar)Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech

Thermal Vision for Soil Assessment in a Multipurpose Environmental Chamber under Martian Conditions towards Robot Navigation

Soil assessment is important for mobile robot planning and navigation on natural and planetary environments. Terramechanic characteristics can be inferred from the thermal behaviour of soils under the influence of sunlight using remote sensors such as Long-Wave Infrared cameras. However, this behaviour is greatly affected by the low atmospheric pressures of planets such as Mars, so practical models are needed to relate robot remote sensing data on Earth to target planetary exploration conditions. This article proposes a general framework based on multipurpose environmental chambers to generate representative diurnal cycle dataset pairs that can be useful to relate the thermal behaviour of a soil on Earth to the corresponding behaviour under planetary pressure conditions using remote sensing. Furthermore, we present an application of the proposed framework to generate datasets using the UMA-Laserlab chamber, which can replicate the atmospheric \ch{CO2} composition of Mars. In particular, we analyze the thermal behaviour of four soil samples of different granularity by comparing replicated Martian surface conditions and their Earth's diurnal cycle equivalent. Results indicate a correlation between granularity and thermal inertia that is consistent with available Mars surface measurements recorded by rovers. The resulting dataset pairs, consisting of representative diurnal cycle thermal images with heater, air, and subsurface temperatures, have been made available for the scientific community.Comment: 10 pages, 13 figure

Geochemical Analysis of Ronda Peridotite: Insights into Martian Analogues and Alteration Processes.

In the context of the geochemical characterization of potential Martian analogues on Earth, a peridotite sample from Serranía de Ronda (Málaga, Spain) was analyzed. The peridotites of Ronda are distinguished by the prevalent presence of magnesium-rich minerals, notably olivine and pyroxenes (orthopyroxenes and clinopyroxenes), and their association with igneous rocks of basaltic composition. In addition, this sample is particularly relevant due to its susceptibility to carbonation, serpentinization, and other alteration processes induced by hyperalkaline fluids it may come into contact with. Likewise, the phenomenon of serpentinization not only initiates a cascade of chemical reactions capable of yielding complex organic molecules but also it establishes distinctive geochemical conditions conducive to microbial life. This study was focused on the geochemical analysis of the interest sample with of three spectroscopic techniques: laser-induced breakdown spectroscopy (LIBS), micro–energy dispersive X-ray fluorescence (µ-EDXRF), and Raman spectroscopy, all these integrated within the SuperCam instrument aboard the Perseverance rover. The elemental composition can provide information about the spatial distribution of hydrothermally altered rocks. Two-dimensional maps were generated for major (Figure 1) and minor elements, from LIBS and μ-EDXRF spectral data. Ratios normally used in the identification of mineral phases present in peridotites, such as olivine and chromites, were also calculated. These data were confirmed from Raman spectra. Finally, regions in the sample with similar spectroscopic characteristics were identified by K-means analysis. The results indicated that certain regions in the sample exhibit a high proportion of chromium and iron, which may suggest the potential presence of spinels such as chromite and other associated minerals.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tec

Evaluation of a New Monoclonal Chemiluminescent Immunoassay Stool Antigen Test for the Diagnosis of Helicobacter pylori Infection: A Spanish Multicentre Study

The stool antigen test (SAT) represents an attractive alternative for detection of Helicobacter pylori. The aim of this study was to assess the accuracy of a new SAT, the automated LIAISON(R) Meridian H. pylori SA based on monoclonal antibodies, compared to the defined gold standard C-13-urea breath test (UBT). This prospective multicentre study (nine Spanish centres) enrolled patients >= 18 years of age with clinical indication to perform UBT for the initial diagnosis and for confirmation of bacterial eradication. Two UBT methods were used: mass spectrometry (MS) including citric acid (CA) or infrared spectrophotometry (IRS) without CA. Overall, 307 patients (145 naive, 162 with confirmation of eradication) were analysed. Using recommended cut-off values (negative SAT = 1.10) the sensitivity, specificity, positive predictive value, negative predictive value and accuracy were 67%, 97%, 86%, 92% and 91%, respectively, obtaining an area under the receiver operating characteristic (ROC) curve (AUC) of 0.85. Twenty-eight patients, including seven false positives and 21 false negatives, presented a discordant result between SAT and UBT. Among the 21 false negatives, four of six tested with MS and 11 of 15 tested with IRS presented a borderline UBT delta value. In 25 discordant samples, PCR targeting H. pylori DNA was performed to re-assess positivity and SAT accuracy was re-analysed: sensitivity, specificity, positive predictive value, negative predictive value, accuracy and AUC were 94%, 97%, 86%, 99%, 97% and 0.96, respectively. The new LIAISON(R) Meridian H. pylori SA SAT showed a good accuracy for diagnosis of H. pylori infection

Poor sensitivity of fecal gluten immunogenic peptides and serum antibodies to detect duodenal mucosal damage in celiac disease monitoring

A lifelong gluten-free diet (GFD) is the only current treatment for celiac disease (CD), but strict compliance is complicated. Duodenal biopsies are the “gold standard” method for diagnosing CD, but they are not generally recommended for disease monitoring. We evaluated the sensitivity and specificity of fecal gluten immunogenic peptides (GIPs) to detect duodenal lesions in CD patients on a GFD and compared them with serum anti-tissue transglutaminase (tTG) IgA antibodies. A prospective study was conducted at two tertiary centers in Spain on a consecutive series of adolescents and adults with CD who maintained a long-lasting GFD. Adherence to a GFD and health-related quality of life were scored with validated questionnaires. Mucosal damage graded according to the Marsh–Oberhüber classification (Marsh 1/2/3) was used as the reference standard. Of the 97 patients included, 27 presented duodenal mucosal damage and 70 had normal biopsies (Marsh 0). The sensitivity (33%) and specificity (81%) of GIPs were similar to those provided by the two assays used to measure anti-tTG antibodies. Scores in questionnaires showed no association with GIP, but an association between GIPs and patients’ self-reported gluten consumption was found (p = 0.003). GIP displayed low sensitivity but acceptable specificity for the detection of mucosal damage in CD.This research was funded by a grant from Asociación Castellana de Aparato Digestivo (year 2018) to A.J.L

LIBS and Acoustic Measurements of Rocks and Regolith Found in the Traverse of the Perseverance Rover Across the Jezero Crater, Mars

The SuperCam instrument of the NASA MARS 2020 Perseverance rover combines a suite of atomic and molecular spectroscopies intended for an extensive description of rocks, soils and minerals in the surroundings of the landing site of the mission – the Jezero crater. The microphone installed on the SuperCam instrument allows the acquisition of acoustic signals resulting from the expansion of laser-induced plasmas towards the atmosphere. Apart from being affected by the propagation characteristics of the Mars atmosphere, the acoustic signal has an additional component related to the properties of the target including surface morphology, hardness, deformation parameters, and elasticity, among others. This information is currently being investigated as a complementary resource for characterization of the ablated material and may well supplement the LIBS data gathered from coincident laser shots. This talk will present SuperCam acoustic data of rocks and minerals found in the traverse of the Perseverance rover and will discuss its correlation with LIBS spectra.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tec

The sound of geological targets on Mars from the absolute intensity of laser-induced sparks shock waves

Inspection of geological material is one of the main goals of the Perseverance rover during its journey across the landscape of the Jezero crater in Mars. NASA's rover integrates SuperCam, an instrument capable of performing standoff characterization of samples using a variety of techniques. Among those tools, SuperCam can perform laser-induced breakdown spectroscopy (LIBS) studies to elucidate the chemical composition of the targets of interest. Data from optical spectroscopy can be supplemented by simultaneously-produced laser-produced plasma acoustics in order to expand the information acquired from the probed rocks thanks to the SuperCam's microphone (MIC) as it can be synchronized with the LIBS laser. Herein, we report cover results from LIBS and MIC during Perseverance's first 380 sols on the Martian surface. We study the correlation between both recorded signals, considering the main intrasample and environmental sources of variation for each technique, to understand their behavior and how they can be interpreted together towards complimenting LIBS with acoustics. We find that louder and more stable acoustic signals are recorded from rock with compact surfaces, i.e., low presence loose particulate material, and harder mineral phases in their composition. Reported results constitute the first description of the evolution of the intensity in the time domain of shockwaves from laser-produced plasmas on geological targets recorded in Mars. These signals are expected contain physicochemical signatures pertaining to the inspected sampling positions. As the dependence of the acoustic signal recorded on the sample composition, provided by LIBS, is unveiled, the sound from sparks become a powerful tool for the identification of mineral phases with similar optical emission spectra.Many people helped with this project in addition to the co-authors, including hardware and operation teams, and we are most grateful for their support. This project was supported in the USA by NASA’s Mars Exploration Program and in France is conducted under the authority of CNES. Research funded by projects UMA18-FEDERJA-272 from Junta de Andalucía and PID2020-119185GB-I00 from Ministerio de Ciencia e Innovacion, of Spain. P.P. is grateful to the European Union’s Next Generation EU (NGEU) plan and the Spanish Ministerio de Universidades for his Margarita Salas fellowship under the program ′′Ayudas para la Recualificacion del Sistema Universitario Español′′. RCW was funded by JPL contract 1681089. A.U was funded by NASA Mars 2020 Participating Scientist program 80NSSC21K0330. Funding for open access charge: Universidad de Málaga / CBU

Caracterización multianalítica de meteorito marciano NWA2975 mediante CF-LIBS, fluorescencia de rayos X y espectroscopía Raman

La caracterización isotópica y elemental de los meteoritos de Marte ha permitido determinar la cronología de los procesos de formación del planeta y avanzar en la comprensión de su evolución biogeoquímica e hidrológica. Los meteoritos más abundantes son las rocas de origen ígneo, como las shergottitas. Los estudios petrológicos y geoquímicos previos del meteorito Northwest Africa 2975 (NWA 2975), revelaron que se trata de una roca volcánica de grano medio, entre subofítica y granular, compuesta predominantemente por piroxenos (57,3 vol.%) y plagioclasa (38,3 vol. %) completamente enmascarados con fases opacas (2,7 vol.%) y fosfatos (1,7 vol.%) [1]. El instrumento SuperCam a bordo del rover Perseverance (misión MARS 2020 de la NASA) está equipado con técnicas atómicas y moleculares (incluyendo LIBS y Raman) para la detección y análisis a distancia de muestras geológicas en la superficie del Planeta Rojo. La capacidad de estas técnicas se ha demostrado ampliamente en la caracterización de rocas, minerales y suelos en varias misiones espaciales. En el presente trabajo, se analizó un fragmento del meteorito NWA 2975 mediante un sistema de micro-LIBS con el objetivo de revelar su composición química elemental. Debido a la heterogeneidad intrínseca de la muestra, se analizaron diferentes posiciones de su superficie. El análisis cuantitativo de los elementos principales (Si, Al, Fe, Mg, Mn, Ca y O) y de otros elementos menores se llevó a cabo utilizando la metodología Calibration-Free [2]. Los resultados sugieren la presencia de piroxenos como principal componente mineral en las posiciones inspeccionadas, aunque también se pueden encontrar otras fases minerales como la plagioclasa. La información extraída del análisis LIBS se ha comparado con la de fluorescencia de rayos X (XRF) y la espectroscopia Raman. El uso combinado de diferentes técnicas espectroscópicas ha permitido obtener una mejor interpretación de los resultados composicionales.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tech

Understanding The Correlation Of Libs And Acoustic Measurements Of Rocks And Soils Found In The Traverse Of The Perseverance Rover Across The Jezero Crater, Mars

The SuperCam instrument of the NASA MARS 2020 Perseverance rover combines a suite of atomic and molecular spectroscopies intended for an extensive description of rocks, soils and minerals in the surroundings of the landing site of the mission – the Jezero crater. The microphone installed on the SuperCam instrument allows the acquisition of acoustic signals resulting from the expansion of laser-induced plasmas towards the atmosphere. Apart from being affected by the propagation characteristics of the Mars atmosphere, the acoustic signal has an additional component related to the properties of the target including surface morphology, hardness, deformation parameters, and elasticity, among others. This information is currently being investigated as a complementary resource for characterization of the ablated material and may well supplement the LIBS data gathered from coincident laser shots. This talk will present SuperCam acoustic data of rocks and minerals found in the traverse of the Perseverance rover and will discuss its correlation with LIBS spectra.Universidad de Málaga. Campus de Excelencia Internacional Andalucía Tec