Additional file 3: Figure S2. of Differences in global gene expression in muscle tissue of Nellore cattle with divergent meat tenderness

Box plot of expression values (log10 FPKM) obtained for the groups studied (tender and tough meat). (TIFF 162 kb

L'Auto-vélo : automobilisme, cyclisme, athlétisme, yachting, aérostation, escrime, hippisme / dir. Henri Desgranges

06 mai 19421942/05/06 (A43,N15108)

Additional file 1: Table S1. of Differences in global gene expression in muscle tissue of Nellore cattle with divergent meat tenderness

Samples number (N), classification of the sample, shear force (kgf/cm2), number of transcripts aligned in pairs (N reads), and percentage of transcripts aligned in pairs (% reads). (DOCX 16 kb

Additional file 3: Table S1. of Gene expression profile of intramuscular muscle in Nellore cattle with extreme values of fatty acid

Differentially expressed genes for C14:0. Table S2. Differentially expressed genes for C16:0. Table S3. Differentially expressed genes for C18:0. Table S4. Differentially expressed genes for C18:1 cis-9. Table S5.Differentially expressed genes for C18:2 cis-9trans-11. Table S6. Differentially expressed genes for C18:2 cis-6 cis -12 n6. Table S7. Differentially expressed genes for C18:3 n3. Table S8. Differentially expressed genes for SFA. Table S9. Differentially expressed genes for MUFA. Table S10. Differentially expressed genes for PUFA. Table S11. Differentially expressed genes for relationship between PUFA and SFA. Table S12. Differentially expressed genes. Table S13. Differentially expressed genes for n6. Table S14. Differentially expressed genes for the ratio of ω6/ω3. (XLS 486 kb

Additional file 1: of Gene expression profile of intramuscular muscle in Nellore cattle with extreme values of fatty acid

Boxplot of the transcript abundance distribution for each beef fatty acid and gene expressed. (PDF 42 kb

Additional file 2: of Gene expression profile of intramuscular muscle in Nellore cattle with extreme values of fatty acid

Principal Component Analysis (PCA) of gene FPKM values between the high and low groups with fatty acids profile: (a) PCA for sum of SFA; (b) PCA for sum of MUFA; (c) PCA for sum of PUFA; (d) PCA for sum of PUFA/SFA ratio; (e) PCA for sum of n3;.(f) PCA for sum of n6; (g) PCA for n6/n3 ratio;(h) PCA for myristic acid (C14:0); (i) PCA for palmitic acid (C16:0); (j) PCA for stearic acid (C18:0);(k) PCA for oleic acid (C18:1 cis-9); (l) PCA for conjugated linoleic acid (C18:2 cis-9 trans-11); (m) PCA for linoleic acid (C18:2 cis6 cis12 n6); (n) PCA for Îą-linolenic (C18:3 n3). (PDF 459 kb