Observing larval transport processes affecting population connectivity : progress and challenges

Author Posting. © Oceanography Society, 2007. This article is posted here by permission of Oceanography Society for personal use, not for redistribution. The definitive version was published in Oceanography 20, 3 (2007): 40-53.Population connectivity is inherently bio-physical: it is determined by physical transport and dispersion, as well as biological processes such as timing of spawning, larval behavior, and mortality. Knowledge of connectivity is essential for understanding ecosystem responses to changing environmental conditions. It establishes the spatial scales over which a population is connected, and in turn the primary spatial scale of population interactions and ecosystem dynamics. Concepts in population connectivity were initially developed in terrestrial ecology, where dispersal may occur at different life stages. In the simplest form, a one-dimensional dispersal curve describes the distribution of settlers away from a source region as a function of distance. As this spatial distribution varies in time, the “dispersal kernel” defines a spatial probability density function of settlers aggregated over time (see, e.g., Okubo and Levin, 2002). This dispersal kernel may be three dimensional, but is often reduced to two dimensions (e.g., animals on a plain) or one dimension (e.g., animals living along the land-water interface).GG received support from the Director of Research at WHOI. SGM is grateful to NSF Ocean Sciences for their support through grants OCE0425312, OCE 0452800, and OCE 0622967. JLL thanks NSF Ocean Sciences for support through grants OCE-9907884, OCE-0326110, and OCE-0528575 and the State of California for support through the Coastal Ocean Current Mapping Program (State Coastal Conservancy)—a component of CeNCOOS, the Central and Northern California Ocean Observing System

Aquatic polymers can drive pathogen transmission in coastal ecosystems.

Gelatinous polymers including extracellular polymeric substances (EPSs) are fundamental to biophysical processes in aquatic habitats, including mediating aggregation processes and functioning as the matrix of biofilms. Yet insight into the impact of these sticky molecules on the environmental transmission of pathogens in the ocean is limited. We used the zoonotic parasite Toxoplasma gondii as a model to evaluate polymer-mediated mechanisms that promote transmission of terrestrially derived pathogens to marine fauna and humans. We show that transparent exopolymer particles, a particulate form of EPS, enhance T. gondii association with marine aggregates, material consumed by organisms otherwise unable to access micrometre-sized particles. Adhesion to EPS biofilms on macroalgae also captures T. gondii from the water, enabling uptake of pathogens by invertebrates that feed on kelp surfaces. We demonstrate the acquisition, concentration and retention of T. gondii by kelp-grazing snails, which can transmit T. gondii to threatened California sea otters. Results highlight novel mechanisms whereby aquatic polymers facilitate incorporation of pathogens into food webs via association with particle aggregates and biofilms. Identifying the critical role of invisible polymers in transmission of pathogens in the ocean represents a fundamental advance in understanding and mitigating the health impacts of coastal habitat pollution with contaminated runoff

Japan Tsunami Current Flows Observed by HF Radars on Two Continents

Quantitative real-time observations of a tsunami have been limited to deep-water, pressure-sensor observations of changes in the sea surface elevation and observations of sea level fluctuations at the coast, which are essentially point measurements. Constrained by these data, models have been used for predictions and warning of the arrival of a tsunami, but to date no detailed verification of flow patterns nor area measurements have been possible. Here we present unique HF-radar area observations of the tsunami signal seen in current velocities as the wave train approaches the coast. Networks of coastal HF-radars are now routinely observing surface currents in many countries and we report clear results from five HF radar sites spanning a distance of 8,200 km on two continents following the magnitude 9.0 earthquake off Sendai, Japan, on 11 March 2011. We confirm the tsunami signal with three different methodologies and compare the currents observed with coastal sea level fluctuations at tide gauges. The distance offshore at which the tsunami can be detected, and hence the warning time provided, depends on the bathymetry: the wider the shallow continental shelf, the greater this time. Data from these and other radars around the Pacific rim can be used to further develop radar as an important tool to aid in tsunami observation and warning as well as post-processing comparisons between observation and model predictions

Chloropigment Distribution and Transport On the Inner Shelf Off Duck, North Carolina

The distribution and movement of chloropigments (chlorophylls and associated degradation products) in the bottom boundary layer near Duck, North Carolina, were examined during July and August 1994. Time series of chloropigment fluorescence, current velocity, and surface wave properties were acquired from instruments mounted on a bottom tripod set at 20 m depth. These data were combined with moored current meter measurements, meteorological data, and shipboard surveys in a comparative assessment of physical processes and chloropigment distribution over a wide range of temporal and spatial scales. Two dominant scales of chloropigment variation were observed. On numerous occasions, small-scale (order m) structure in the near-bottom fluorescence field was observed, even in the absence of identifiable structure in the temperature and salinity fields. Over larger timescales and space scales, variations in fluorescence were related to changes in water mass properties that could be attributed to alternating events of upwelling and downwelling. This view was reinforced by shipboard measurements that revealed correlations between fluorescence and hydrographic fields, both of which were modified by wind-forced upwelling and downwelling and by the advection of low-salinity water from Chesapeake Bay. Local resuspension of sediments did not contribute appreciably to the near-bottom pigment load seen at the tripod, because of low bottom stress. Estimates of chloropigment flux indicated a net shoreward transport of chloropigments in the lower boundary layer. However, the rapid fluctuations of currents and pigment concentrations gave rise to large and frequent variations in chloropigment fluxes, generating uncertainty in extrapolations of this finding to longer timescales

Winter-mixing preconditioning of the spring phytoplankton bloom in the Bay of Biscay

The spring phytoplankton bloom plays a key role in the dynamics of temperate and polar seas. Nevertheless, the mechanisms and processes behind these blooms remain a subject of considerable debate. We analyzed the influence of deep mixing during winter on the spring phytoplankton bloom in the Cantabrian Sea (southern Bay of Biscay). To this end, we combined long-term physical and biogeochemical in situ data (1993–2012) and satellite observations (1997–2012). Deeper winter mixing led to higher nitrate and chlorophyll concentrations through the water column during the spring bloom. However, this effect was modified by short-term variability in near-surface stratification in spring. Winter-mixing preconditioning also influenced different spring bloom metrics: deeper and later mixing in winter was followed by later blooms with a larger peak. In these enhanced blooms, nitrate was taken up at faster rates, indicating higher rates of phytoplankton production. Winters with weaker mixing (that led to weaker spring blooms) were associated with warmer surface temperatures. This relationship suggests that the multi-decadal trend toward warmer surface temperatures in the Bay of Biscay may promote a decrease in the magnitude of the spring bloom, which could impact upper trophic levels and also deep carbon export in the future

Coastal development and precipitation drive pathogen flow from land to sea: evidence from a Toxoplasma gondii and felid host system

Rapidly developing coastal regions face consequences of land use and climate change including flooding and increased sediment, nutrient, and chemical runoff, but these forces may also enhance pathogen runoff, which threatens human, animal, and ecosystem health. Using the zoonotic parasite Toxoplasma gondii in California, USA as a model for coastal pathogen pollution, we examine the spatial distribution of parasite runoff and the impacts of precipitation and development on projected pathogen delivery to the ocean. Oocysts, the extremely hardy free-living environmental stage of T. gondii shed in faeces of domestic and wild felids, are carried to the ocean by freshwater runoff. Linking spatial pathogen loading and transport models, we show that watersheds with the highest levels of oocyst runoff align closely with regions of increased sentinel marine mammal T. gondii infection. These watersheds are characterized by higher levels of coastal development and larger domestic cat populations. Increases in coastal development and precipitation independently raised oocyst delivery to the ocean (average increases of 44% and 79%, respectively), but dramatically increased parasite runoff when combined (175% average increase). Anthropogenic changes in landscapes and climate can accelerate runoff of diverse pathogens from terrestrial to aquatic environments, influencing transmission to people, domestic animals, and wildlife

Evaluating Connectivity between Marine Protected Areas Using CODAR High-Frequency Radar

To investigate the connectivity between central California marine protected areas (MPAs), back-projections were calculated using the network of high-frequency (HF) radar ocean surface current mapping stations operated along the California coast by the member institutions of the Coastal Ocean Currents Monitoring Program with funding provided by California voters through Propositions 40 & 50 and administered by the State Coastal Conservancy. Trajectories of 1 km resolution grids of water particles were back-projected from ten MPAs each hour, out through 40 days in the past, from each day in 2008, producing a map of where surface waters travel over a 40-day period to reach the MPAs - and visualizations of the length of time the waters travel along these paths. By comparing the travel times of those back-projected track-points that crossed between MPA regions, the connection time between MPAs along the State\u27s central coast was assessed. Repeating these calculations resulted in a connectivity matrix between the MPAs in the region, and may be useful for assessing connectivity for the important invertebrate and fish larvae that are restricted to the surface ocean during a fraction of their lifecycle

Poleward propagating subinertial alongshore surface currents off the U.S. West Coast

The article of record as published may be found at http://dx.doi.org/10.1002/jgrc.20400The network comprising 61 high-frequency radar systems along the U.S. West Coast (USWC) provides a unique, high resolution, and broad scale view of ocean surface circulation. Subinertial alongshore surface currents show poleward propagating signals with phase speeds of O(10) and O(100–300) km d 1 that are consistent with historical in situ observations off the USWC and that can be possibly interpreted as coastally trapped waves (CTWs). The propagating signals in the slow mode are partly observed in southern California, which may result from scattering and reflection of higher-mode CTWs due to curvature of shoreline and bathymetry near Point Conception, California. On the other hand, considering the order of the phase speed in the slow mode, the poleward propagating signals may be attributed to alongshore advection or pressure-driven flows. A statistical regression of coastal winds at National Data Buoy Center buoys on the observed surface currents partitions locally and remotely wind-forced components, isolates footprints of the equatorward propagating storm events in winter off the USWC, and shows the poleward propagating signals year round.National Research Foundation (NRF)Ministry of EducationHuman Resources Development of the Korea Institute of Energy Technology Evaluation and Planning (KETEP)Ministry of Trade, Industry and EnergyRepublic of Koreano. 2013R1A1A2057849no. 2011403020004

Tide and wind coupling in a semienclosed bay driven by coastal upwelling

The Ría de Vigo is a semi-enclosed bay in which tidal residual currents are associated with coastal upwelling events. Both upwelling and downwelling favourable winds generate a bidirectional exchange flow with the shelf – a two-layer circulation with surface waters leaving (entering) the ria and a compensating inflow (outflow) through the bottom layer under upwelling (downwelling) conditions. This vertical circulation changes the vertical density structure inside the ria. In the ria, the tide is mainly semidiurnal (M2, S2 and K2), with some energy in the diurnal band (K1). Our velocity observations show that the vertical structure of the tidal currents in the ria do not exhibit a classic barotropic profile with a bottom boundary layer beneath uniform “free-stream” flow as the tidal bottom boundary layer is affected by stratification. This links tidal circulation to the wind-driven residual circulation, since the latter also greatly helps to control the stratification. We quantify this effect by fitting tidal ellipses to observed velocities through the water column. In addition to this indirect coupling through stratification, there is a direct interaction in which velocities in the upper and bottom layers are best correlated with winds while the mid-water velocities are best correlated with tides. These wind-tide interactions are expected to play a key role in the resuspension and transport of nutrients and phytoplankton in the Ria.CTM2012-3515