Mantle to surface degassing of alkalic magmas at Erebus volcano, Antarctica

International audienceContinental intraplate volcanoes, such as Erebus volcano, Antarctica, are associated with extensional tectonics, mantle upwelling and high heat flow. Typically, erupted magmas are alkaline and rich in volatiles (especially CO2), inherited from low degrees of partial melting of mantle sources. We examine the degassing of the magmatic system at Erebus volcano using melt inclusion data and high temporal resolution open-path Fourier transform infrared (FTIR) spectroscopic measurements of gas emissions from the active lava lake. Remarkably different gas signatures are associated with passive and explosive gas emissions, representative of volatile contents and redox conditions that reveal contrasting shallow and deep degassing sources. We show that this unexpected degassing signature provides a unique probe for magma differentiation and transfer of CO2-rich oxidised fluids from the mantle to the surface, and evaluate how these processes operate in time and space. Extensive crystallisation driven by CO2 fluxing is responsible for isobaric fractionation of parental basanite magmas close to their source depth. Magma deeper than 4 kbar equilibrates under vapour-buffered conditions. At shallower depths, CO2-rich fluids accumulate and are then released either via convection-driven, open-system gas loss or as closed-system slugs that ascend and result in Strombolian eruptions in the lava lake. The open-system gases have a reduced state (below the QFM buffer) whereas the closed-system gases preserve their deep oxidised signatures (close to the NNO buffer)

A Specialized Polythioamide‐Binding Protein Confers Antibiotic Self‐Resistance in Anaerobic Bacteria

Understanding antibiotic resistance mechanisms is central to the development of anti‐infective therapies and genomics‐based drug discovery. Yet, many knowledge gaps remain regarding the resistance strategies employed against novel types of antibiotics from less‐explored producers such as anaerobic bacteria, among them the Clostridia. Through the use of genome editing and functional assays, we found that CtaZ confers self‐resistance against the copper chelator and gyrase inhibitor closthioamide (CTA) in Ruminiclostridium cellulolyticum . Bioinformatics, biochemical analyses, and X‐ray crystallography revealed CtaZ as a founding member of a new group of GyrI‐like proteins. CtaZ is unique in binding a polythioamide scaffold in a ligand‐optimized hydrophobic pocket, thereby confining CTA. By genome mining using CtaZ as a handle, we discovered previously overlooked homologs encoded by diverse members of the phylum Firmicutes, including many pathogens. In addition to characterizing both a new role for a GyrI‐like domain in self‐resistance and unprecedented thioamide binding, this work aids in uncovering related drug‐resistance mechanisms

Comparing Common Techniques for Calculating Parasite Prevalence

Raccoons (Procyon lotor) are the final host for raccoon roundworms (Baylisascaris procyonis). Raccoon roundworm is the leading cause of a dangerous neurological disease, known as larva migrans encephalopathy. Diagnostic tools for detecting the presence of B. procyonis within a raccoon population include necropsy, fecal flotation, and latrine analysis. Necropsies yield the highest measure of prevalence, with fecal flotation and latrine analysis often underestimating infection rates. We necropsied 225 raccoons gathered from 10 townships of Clark and Greene Counties in Ohio. We collected fecal samples from 95 raccoons negative for B. procyonis at necropsy. We suspended the feces in Sheather’s solution to float any eggs, and prepared slides from this solution. Nearly 14% of raccoons negative at necropsy for B. procyonis possessed eggs in their feces. We used a chi squared test for equality of distributions to determine the likelihood that a positive fecal analysis is related to B. procyonis prevalence or to the area in which the raccoon was trapped. These data will help us determine how well fecal analyses estimate parasite prevalence

Baylisascaris procyonis Impacts Raccoon (Procyon lotor) Diets

Raccoons (Procyon lotor) are the definitive host for raccoon roundworms (Baylisascaris procyonis). Raccoon roundworm is responsible for a dangerous neurological disease known as larva migrans encephalopathy. Raccoons are omnivorous animals and rely on various food items. Dietary analyses help determine how a raccoon changes its diet in response to environmental features. Raccoons eat whatever food resource is most convenient and abundant. Parasite infections can potentially affect host eating habits in order to keep the host alive and active longer. In this study, we analyzed the diets of necropsied raccoons from ten townships of Clark and Greene Counties by examining their stomach contents. We categorized stomach contents by separating out plant material, vertebrate tissue, and invertebrate tissue. We measured the total stomach mass and the mass of plant material alone in order to compare and obtain a percentage of plant material in the raccoons’ diet. We conducted two chi-squared tests for equality of distributions. We tested the null hypotheses that raccoons from townships with high prevalence (\u3e60%) have the same vertebrate tissue and plant tissue prevalence as raccoons from townships with low roundworm prevalence

Does Baylisascaris procyonis Phylogeny Correlate with That of the Raccoon (Procyon lotor)

Baylisacaris procyonis, commonly known as the raccoon roundworm, is a parasite that inhabits the small intestine of the North American raccoon (Procyon lotor). Although humans do not typically become the definitive host, humans can become infected through handling soil containing eggs. B. procyonis can induce serious health complications in cases of human infection, including degenerative retinal and behavioral changes, coma, and even death. High prevalence of B. procyonis in a raccoon population increases the probability of transference to human hosts. In our study, we analyzed the genetic structure of B. procyonis harvested from raccoons of southwestern Ohio, and compared this to the genetic structure of the raccoons they inhabited. It is our hypothesis that the genetic structuring of the roundworms is the same as the genetic structuring of the raccoons. We isolated DNA from the roundworms using the method outlined in the DNA Minikit (Qiagen). Our research team isolated DNA from each roundworm sample and sent it to the Plant-Microbe Genomics Facility at The Ohio State University for gene amplification and sequencing. We built phylogenetic trees using these sequences, and compared these trees to some constructed for the raccoons. The correlations drawn between the raccoon and B. procyonis phylogenetic trees will help us better understand the relationship between the two species

Does Baylisascaris procyonis Impact Raccoon (Procyon lotor) Genetics?

Raccoons (Procyon lotor) are the final host for raccoon roundworms (Baylisascaris procyonis). Raccoon roundworm is the leading cause of a dangerous neurological disease, known as larva migrans encephalopathy. Phylogenetic trees illustrate co-evolutionary events between species living in a symbiotic relationship with each other. Throughout the coevolution of host and parasite, many aspects of a population affect the way the members interact with one another and with symbiotic species. In order to evaluate the relationship between host and parasite in regards to diet, we isolated DNA from intestinal wall tissue, amplified a portion of exon 2 from MHC II, and sent our samples to Ohio State University for sequencing. We calculated heterozygosities for the nine townships we surveyed. We used a chi-squared test for equality of distributions to test whether raccoons from townships with above 60% prevalence have different heterozygosity for this locus than other raccoons. These data will help us to understand the relationship between raccoons and raccoon roundworm

Baylisascaris procyonis prevalence in raccoons (Procyon lotor) and its relation to landscape features

Raccoons (Procyon lotor) are the final host for raccoon roundworm (Baylisascaris procyonis). Raccoon roundworm is the leading cause of a dangerous neurological disease known as larva migrans encephalopathy. Land fragmentation occurs when natural environments are broken up by urban or agricultural landscapes. Raccoons thrive in urban environments, while raccoons in agricultural settings forage over larger areas than raccoons in urban settings do. Land fragmentation affects concentrations of B. procyonis parasites in intermediate hosts. We calculated the prevalence of raccoon roundworm in 9 townships of Greene and Clark Counties by necropsying 226 raccoon intestines. Prevalence is defined as the number of raccoons infected with roundworm divided by the total number of raccoons sampled. We determined that the prevalence of B. procyonis from Beavercreek township is significantly lower than the other townships (χ2 = 25.19, p-value = 0.0007). Prevalence of raccoon roundworm in this region is lower than many areas in the Midwestern United States, suggesting the need for further research to determine reasons for the lower prevalence in the Ohio region

Advancing the public health applications of Chlamydia trachomatis serology.

Genital Chlamydia trachomatis infection is the most commonly diagnosed sexually transmitted infection. Trachoma is caused by ocular infection with C trachomatis and is the leading infectious cause of blindness worldwide. New serological assays for C trachomatis could facilitate improved understanding of C trachomatis epidemiology and prevention. C trachomatis serology offers a means of investigating the incidence of chlamydia infection and might be developed as a biomarker of scarring sequelae, such as pelvic inflammatory disease. Therefore, serological assays have potential as epidemiological tools to quantify unmet need, inform service planning, evaluate interventions including screening and treatment, and to assess new vaccine candidates. However, questions about the performance characteristics and interpretation of C trachomatis serological assays remain, which must be addressed to advance development within this field. In this Personal View, we explore the available information about C trachomatis serology and propose several priority actions. These actions involve development of target product profiles to guide assay selection and assessment across multiple applications and populations, establishment of a serum bank to facilitate assay development and evaluation, and development of technical and statistical methods for assay evaluation and analysis of serological findings. The field of C trachomatis serology will benefit from collaboration across the public health community to align technological developments with their potential applications