Run-time Spatial Mapping of Streaming Applications to Heterogeneous Multi-Processor Systems

In this paper, we define the problem of spatial mapping. We present reasons why performing spatial mappings at run-time is both necessary and desirable. We propose what is—to our knowledge—the first attempt at a formal description of spatial mappings for the embedded real-time streaming application domain. Thereby, we introduce criteria for a qualitative comparison of these spatial mappings. As an illustration of how our formalization relates to practice, we relate our own spatial mapping algorithm to the formal model

MODIS NDVI Change Detection Techniques and Products Used in the Near Real Time ForWarn System for Detecting, Monitoring, and Analyzing Regional Forest Disturbances

This presentation discusses MODIS NDVI change detection methods and products used in the ForWarn Early Warning System (EWS) for near real time (NRT) recognition and tracking of regionally evident forest disturbances throughout the conterminous US (CONUS). The latter has provided NRT forest change products to the forest health protection community since 2010, using temporally processed MODIS Aqua and Terra NDVI time series data to currently compute and post 6 different forest change products for CONUS every 8 days. Multiple change products are required to improve detectability and to more fully assess the nature of apparent disturbances. Each type of forest change product reports per pixel percent change in NDVI for a given 24 day interval, comparing current versus a given historical baseline NDVI. EMODIS 7 day expedited MODIS MOD13 data are used to obtain current and historical NDVIs, respectively. Historical NDVI data is processed with Time Series Product Tool (TSPT); and 2) the Phenological Parameters Estimation Tool (PPET) software. While each change products employ maximum value compositing (MVC) of NDVI, the design of specific products primarily differs in terms of the historical baseline. The three main change products use either 1, 3, or all previous years of MVC NDVI as a baseline. Another product uses an Adaptive Length Compositing (ALC) version of MVC to derive an alternative current NDVI that is the freshest quality NDVI as opposed to merely the MVC NDVI across a 24 day time frame. The ALC approach can improve detection speed by 8 to 16 days. ForWarn also includes 2 change products that improve detectability of forest disturbances in lieu of climatic fluctuations, especially in the spring and fall. One compares current MVC NDVI to the zonal maximum under the curve NDVI per pheno-region cluster class, considering all previous years in the MODIS record. The other compares current maximum NDVI to the mean of maximum NDVI for all previous MODIS years

Role of MODIS Vegetation Phenology Products in the ForWarn System for Monitoring of Forest Disturbances in the Conterminous United States

This presentation discusses MODIS vegetation phenology products used in the ForWarn Early Warning System (EWS) tool for near real time regional forest disturbance detection and surveillance at regional to national scales. The ForWarn EWS is being developed by the USDA Forest Service NASA, ORNL, and USGS to aid federal and state forest health management activities. ForWarn employs multiple historical land surface phenology products that are derived from MODIS MOD13 Normalized Difference Vegetation Index (NDVI) data. The latter is temporally processed into phenology products with the Time Series Product Tool (TSPT) and the Phenological Parameter Estimation Tool (PPET) software produced at NASA Stennis Space Center. TSPT is used to effectively noise reduce, fuse, and void interpolate MODIS NDVI data. PPET employs TSPT-processed NDVI time series data as an input, outputting multiple vegetation phenology products at a 232 meter resolution for 2000 to 2011, including NDVI magnitude and day of year products for seven key points along the growing season (peak of growing season and the minima, 20%, and 80% of the peak NDVI for both the left and right side of growing season), cumulative NDVI integral products for the most active part of the growing season and sequentially across the growing season at 8 day intervals, and maximum value NDVI products composited at 24 day intervals in which each product date has 8 days of overlap between the previous and following product dates. MODIS NDVI phenology products are also used to compute nationwide NRT forest change products refreshed every 8 days. These include percent change in forest NDVI products that compare the current NDVI from USGS eMODIS products to historical MODIS MOD13 NDVI. For each date, three forest change products are produced using three different maximum value NDVI baselines (from the previous year, three previous years, and all previous years). All change products are output with a rainbow color table in which forests with the most severe NDVI decreases are assigned hot colors (yellow to red) and forests with prominent NDVI increases are assigned cold colors (blue tones). All mentioned products have been integrated as data layers into ForWarn s geospatial data viewer known as the U.S. Forest Change Assessment Viewer (FCAV). The latter is used to view and assess the context of the mentioned forest change products with respect to ancillary data layers, such as land cover, elevation, hydrologic features, climatic data, storm data, aerial disturbance surveys, fire data, and land ownership. The FCAV also includes a temporal NDVI profiler for viewing phenological change in multi-year NDVI associated with known or suspected regionally apparent forest disturbances (e.g., from fire and insects). ForWarn forest change products have been used to detect, track, and assess several biotic and abiotic regional forest disturbance events across the country, including ephemeral and longer lasting damage from storms, drought, and insects. Such change products are most effective for viewing severe disturbances affecting multiple MODIS pixels. MODIS vegetation phenology products contribute vital current information on forest conditions to the ForWarn system and this role is expected to grow as these products are refined and derivative products are added

Contribution of National near Real Time MODIS Forest Maximum Percentage NDVI Change Products to the U.S. ForWarn System

This presentation reviews the development, integration, and testing of Near Real Time (NRT) MODIS forest % maximum NDVI change products resident to the USDA Forest Service (USFS) ForWarn System. ForWarn is an Early Warning System (EWS) tool for detection and tracking of regionally evident forest change, which includes the U.S. Forest Change Assessment Viewer (FCAV) (a publically available on-line geospatial data viewer for visualizing and assessing the context of this apparent forest change). NASA Stennis Space Center (SSC) is working collaboratively with the USFS, ORNL, and USGS to contribute MODIS forest change products to ForWarn. These change products compare current NDVI derived from expedited eMODIS data, to historical NDVI products derived from MODIS MOD13 data. A new suite of forest change products are computed every 8 days and posted to the ForWarn system; this includes three different forest change products computed using three different historical baselines: 1) previous year; 2) previous three years; and 3) all previous years in the MODIS record going back to 2000. The change product inputs are maximum value NDVI that are composited across a 24 day interval and refreshed every 8 days so that resulting images for the conterminous U.S. are predominantly cloud-free yet still retain temporally relevant fresh information on changes in forest canopy greenness. These forest change products are computed at the native nominal resolution of the input reflectance bands at 231.66 meters, which equates to approx 5.4 hectares or 13.3 acres per pixel. The Time Series Product Tool, a MATLAB-based software package developed at NASA SSC, is used to temporally process, fuse, reduce noise, interpolate data voids, and re-aggregate the historical NDVI into 24 day composites, and then custom MATLAB scripts are used to temporally process the eMODIS NDVIs so that they are in synch with the historical NDVI products. Prior to posting, an in-house snow mask classification product is computed for the current compositing period and integrated into the change images to account for snow related NDVI drops. The supplemental snow classification product was needed because other available QA cloud/snow mask typically underestimates snow cover. MODIS true and false color composites were also computed from eMODIS reflectance data and the true color RGBs are also posted on ForWarn?s FCAV; this data is used for assessing apparent occasional quality issues on the change products due to residual unmasked cloud cover. New forest change products are posted with typical latencies of 1-2 days after the last input eMODIS data collection date for a given 24 day compositing period

Primary breast lymphoma: Patient profile, outcome and prognostic factors. A multicentre Rare Cancer Network study

BACKGROUND: To asses the clinical profile, treatment outcome and prognostic factors in primary breast lymphoma (PBL). METHODS: Between 1970 and 2000, 84 consecutive patients with PBL were treated in 20 institutions of the Rare Cancer Network. Forty-six patients had Ann Arbor stage IE, 33 stage IIE, 1 stage IIIE, 2 stage IVE and 2 an unknown stage. Twenty-one underwent a mastectomy, 39 conservative surgery and 23 biopsy; 51 received radiotherapy (RT) with (n = 37) or without (n = 14) chemotherapy. Median RT dose was 40 Gy (range 12-55 Gy). RESULTS: Ten (12%) patients progressed locally and 43 (55%) had a systemic relapse. Central nervous system (CNS) was the site of relapse in 12 (14%) cases. The 5-yr overall survival, lymphoma-specific survival, disease-free survival and local control rates were 53%, 59%, 41% and 87% respectively. In the univariate analyses, favorable prognostic factors were early stage, conservative surgery, RT administration and combined modality treatment. Multivariate analysis showed that early stage and the use of RT were favorable prognostic factors. CONCLUSION: The outcome of PBL is fair. Local control is excellent with RT or combined modality treatment but systemic relapses, including that in the CNS, occurs frequently