Genomic surveillance of SARS-COV-2 reveals diverse circulating variant lineages in Nairobi and Kiambu Counties, Kenya

Genomic surveillance and identification of COVID-19 outbreaks are important in understanding the genetic diversity, phylogeny, and lineages of SARS-CoV-2. Genomic surveillance provides insights into circulating infections, and the robustness and design of vaccines and other infection control approaches. We sequenced 57 SARS-CoV-2 isolates from a Kenyan clinical population, of which 55 passed quality checks using the Ultrafast Sample placement on the Existing tRee (UShER) workflow. Phylo-genome-temporal analyses across two regions in Kenya (Nairobi and Kiambu County) revealed that B.1.1.7 (Alpha; n = 32, 56.1%) and B.1 (n = 9, 15.8%) were the predominant lineages, exhibiting low Ct values (5-31) suggesting high infectivity, and variant mutations across the two regions. Lineages B.1.617.2, B.1.1, A.23.1, A.2.5.1, B.1.596, A, and B.1.405 were also detected across sampling sites within target populations. The lineages and genetic isolates were traced back to China (A), Costa Rica (A.2.5.1), Europe (B.1, B.1.1, A.23.1), the USA (B.1.405, B.1.596), South Africa (B.1.617.2), and the United Kingdom (B.1.1.7), indicating multiple introduction events. This study represents one of the genomic SARS-CoV-2 epidemiology studies in the Nairobi metropolitan area, and describes the importance of continued surveillance for pandemic control

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Data from: Rapid nectar-meal effects on a predator’s capacity to kill mosquitoes

Using Evarcha culicivora, an East African jumping spider (Salticidae), we investigate how nectar meals function in concert with predation specifically at the juvenile stage between emerging from the egg sac and the first encounter with prey. Using plants and using artificial nectar consisting of sugar alone or sugar plus amino acids, we show that the plant species (Lantana camara, Ricinus communis, Parthenium hysterophorus), the particular sugars in the artificial nectar (sucrose, fructose, glucose, maltose), the concentration of sugar (20%, 5%, 1%) and the duration of pre-feeding fasts (3 days, 6 days) influence the spider's prey-capture proficiency on the next day after the nectar meal. However, there were no significant effects of amino acids. Our findings suggest that benefits from nectar feeding are derived primarily from access to particular sugars, with fructose and sucrose being the most beneficial, glucose being intermediate and maltose being no better than a water-only control

Data from: Rapid nectar-meal effects on a predator’s capacity to kill mosquitoes

Using Evarcha culicivora, an East African jumping spider (Salticidae), we investigate how nectar meals function in concert with predation specifically at the juvenile stage between emerging from the egg sac and the first encounter with prey. Using plants and using artificial nectar consisting of sugar alone or sugar plus amino acids, we show that the plant species (Lantana camara, Ricinus communis, Parthenium hysterophorus), the particular sugars in the artificial nectar (sucrose, fructose, glucose, maltose), the concentration of sugar (20%, 5%, 1%) and the duration of pre-feeding fasts (3 days, 6 days) influence the spider's prey-capture proficiency on the next day after the nectar meal. However, there were no significant effects of amino acids. Our findings suggest that benefits from nectar feeding are derived primarily from access to particular sugars, with fructose and sucrose being the most beneficial, glucose being intermediate and maltose being no better than a water-only control