132 research outputs found
Between Power and Empowerment - Monitoring and Evaluation at a Grassroots Women's Fund in South Africa
In the past few years women’s empowerment and gender equality initiatives have been under increasing pressure to measure their impact. This thesis explores the stakeholders’ experiences with the monitoring and evaluation practice with a case study of a women’s fund that provides grants to grassroots women’s organizations in South Africa. The study is based on previous research, the grassroots development framework, and a combination of principal-agent theory and Kabeer’s (1999) women empowerment framework. Through a content analysis of interviews with staff members and grantees, as well as the review of documents, challenges and opportunities experienced in their current monitoring and evaluation practice are identified. It is argued that the principal-agent constellation is a key factor that creates challenges in conducting monitoring and evaluation. Furthermore, it is claimed that there is currently a gap between widely used tools and practice at grassroots level as well as between the stakeholders’ different understandings of success and how to monitor and evaluate the work of women’s organizations in the context of a grassroots women’s fund. This leads to the postulation for an alternative monitoring and evaluation model, which strengthens the systematic use of informal methods, is oriented on the agents, and captures the link between individual experience and structure
Affective-autonomic states of domestic pigs in the context of coping and animal welfare
Gaining better insight in affective states of farm animals is of importance for understanding their welfare state. One important step in this context is to establish valid proxy measures to objectively assess and interpret an individual’s subjective perception of its environment. This thesis presents a reliable tool for the objective evaluation of affective-autonomic states in free-moving pigs and gains insight into the neurophysiological mechanisms underlying the individual processing of affective states in relation to their valence and arousal dimensions.Die Untersuchung affektiver Zustände von Nutztieren ist für das Verständnis ihres Wohlbefindens von essentieller Bedeutung. Ein wichtiger Schritt in diesem Kontext ist die Etablierung zuverlässiger Messmethoden zur objektiven Beurteilung und Interpretation individueller subjektiver Wahrnehmung. Diese Arbeit stellt eine valide Methode zur objektiven Beurteilung affektiv-autonomer Zustände bei Schweinen dar und vermittelt einen Einblick in die neurophysiologischen Mechanismen, die der individuellen Verarbeitung affektiver Zustände zugrunde liegen
Jellyfish: A modular code for wave function-based electron dynamics simulations and visualizations on traditional and quantum compute architectures
Ultrafast electron dynamics have made rapid progress in the last few years. With Jellyfish, we now introduce a program suite that enables to perform the entire workflow of an electron-dynamics simulation. The modular program architecture offers a flexible combination of different propagators, Hamiltonians, basis sets, and more. Jellyfish can be operated by a graphical user interface, which makes it easy to get started for nonspecialist users and gives experienced users a clear overview of the entire functionality. The temporal evolution of a wave function can currently be executed in the time-dependent configuration interaction method (TDCI) formalism, however, a plugin system facilitates the expansion to other methods and tools without requiring in-depth knowledge of the program. Currently developed plugins allow to include results from conventional electronic structure calculations as well as the usage and extension of quantum-compute algorithms for electron dynamics. We present the capabilities of Jellyfish on three examples to showcase the simulation and analysis of light-driven correlated electron dynamics. The implemented visualization of various densities enables an efficient and detailed analysis for the long-standing quest of the electron–hole pair formation
GPCR-SSFE: A comprehensive database of G-protein-coupled receptor template predictions and homology models
<p>Abstract</p> <p>Background</p> <p>G protein-coupled receptors (GPCRs) transduce a wide variety of extracellular signals to within the cell and therefore have a key role in regulating cell activity and physiological function. GPCR malfunction is responsible for a wide range of diseases including cancer, diabetes and hyperthyroidism and a large proportion of drugs on the market target these receptors. The three dimensional structure of GPCRs is important for elucidating the molecular mechanisms underlying these diseases and for performing structure-based drug design. Although structural data are restricted to only a handful of GPCRs, homology models can be used as a proxy for those receptors not having crystal structures. However, many researchers working on GPCRs are not experienced homology modellers and are therefore unable to benefit from the information that can be gleaned from such three-dimensional models. Here, we present a comprehensive database called the GPCR-SSFE, which provides initial homology models of the transmembrane helices for a large variety of family A GPCRs.</p> <p>Description</p> <p>Extending on our previous theoretical work, we have developed an automated pipeline for GPCR homology modelling and applied it to a large set of family A GPCR sequences. Our pipeline is a fragment-based approach that exploits available family A crystal structures. The GPCR-SSFE database stores the template predictions, sequence alignments, identified sequence and structure motifs and homology models for 5025 family A GPCRs. Users are able to browse the GPCR dataset according to their pharmacological classification or search for results using a UniProt entry name. It is also possible for a user to submit a GPCR sequence that is not contained in the database for analysis and homology model building. The models can be viewed using a Jmol applet and are also available for download along with the alignments.</p> <p>Conclusions</p> <p>The data provided by GPCR-SSFE are useful for investigating general and detailed sequence-structure-function relationships of GPCRs, performing structure-based drug design and for better understanding the molecular mechanisms underlying disease-associated mutations in GPCRs. The effectiveness of our multiple template and fragment approach is demonstrated by the accuracy of our predicted homology models compared to recently published crystal structures.</p
Photo-excited charge transfer from adamantane to electronic bound states in water
Aqueous nanodiamonds illuminated by UV light produce free solvated electrons, which may drive high-energy reduction reactions in water. However, the influence of water conformations on the excited-state electron-transfer mechanism are still under debate. In this work, we offer a theoretical study of charge-transfer states in adamantane-water structures obtained by linear-response time-dependent density-functional theory. Small water clusters with broken hydrogen bonds are found to efficiently bind the electron from adamantane. A distinction is made with respect to the nature of the water clusters: some bind the electron in a water cavity, others along a strong permanent total dipole. These two types of bound states are more strongly binding, the higher their electron affinity and their positive electrostatic potential, the latter being dominated by the energy of the lowest unoccupied molecular orbital of the isolated water clusters. Structural sampling in a thermal equilibrium at room temperature via molecular dynamics snapshots confirms under which conditions the underlying waters clusters can occur and verifies that broken hydrogen bonds in the water network close to adamantane can create traps for the solvated electron
Photo-excited charge transfer from adamantane to electronic bound states in water
Aqueous nanodiamonds illuminated by UV light produce free solvated electrons, which may drive high-energy reduction reactions in water. However, the influence of water conformations on the excited-state electron-transfer mechanism are still under debate. In this work, we offer a theoretical study of charge-transfer states in adamantane-water structures obtained by linear-response time-dependent density-functional theory. Small water clusters with broken hydrogen bonds are found to efficiently bind the electron from adamantane. A distinction is made with respect to the nature of the water clusters: some bind the electron in a water cavity, others along a strong permanent total dipole. These two types of bound states are more strongly binding, the higher their electron affinity and their positive electrostatic potential, the latter being dominated by the energy of the lowest unoccupied molecular orbital of the isolated water clusters. Structural sampling in a thermal equilibrium at room temperature via molecular dynamics snapshots confirms under which conditions the underlying waters clusters can occur and verifies that broken hydrogen bonds in the water network close to adamantane can create traps for the solvated electron
Keeping Up with the Joneses: Instagram Use and its Influence on Conspicuous Consumption
So far research in the area of social networking sites (SNS) has drawn surprisingly little attention to users’ conspicuous consumption (CC), even though the constant rise of younger people’s debts seems to go hand in hand with the rise of SNS. To fill this research gap, we conducted two studies based on social comparison and normative influence theory. In a preliminary study, we show that Instagram use is positively related to users’ CC. In the main study, using a sample of 283 German Instagram users, we find possible explanations for this association. While norms on Instagram seem not to account for the link between Instagram use and CC, our results suggest a mediating effect of envy. We contribute to the literature by providing insights on SNS use and CC while offering first explanations for its potentially harmful economic outcomes.
Acknowledgment
This work has been funded by the Federal Ministry of Education and Research of Germany (BMBF) under grant no. 16DII116 (“Deutsches Internet-Institut”)
Utility of a Sequence-Independent, Single-Primer-Amplification (SISPA) and Nanopore Sequencing Approach for Detection and Characterization of Tick-Borne Viral Pathogens
Currently, next generation sequencing (NGS) is the mainly used approach for identification and monitorization of viruses with a potential public health threat in clinical and environmental samples. To facilitate detection in NGS, the sequence-independent, single-primer-amplification (SISPA) is an effective tool for enriching virus sequences. We performed a preliminary assessment of SISPA-nanopore sequencing as a potential approach for screening tick-borne viruses in six specimens with detectable Crimean-Congo hemorrhagic fever virus (CCHFV) and Jingmen tick virus (JMTV) sequences. A comparison of unbiased NGS and SISPA followed by nanopore sequencing was carried out in 4 specimens with single and pooled ticks. The approach was further used for genome sequencing in culture-grown viruses. Overall, total/virus-specific read counts were significantly elevated in cell culture supernatants in comparison to single or pooled ticks. Virus genomes could be successfully characterized by SISPA with identities over 99%. Genome coverage varied according to the segment and total read count. Base calling errors were mainly observed in tick specimens and more frequent in lower viral loads. Culture-grown viruses were phylogenetically-related to previously-reported local viruses. In conclusion, the SISPA + nanopore sequencing was successful in generating data comparable to NGS and will provide an effective tool for broad-range virus detection in ticks
Sensitive on-site detection of SARS-CoV-2 by ID NOW COVID-19
Point of care detection of SARS-CoV-2 is one pillar in a containment strategy and important to break infection chains. Here we report the sensitive, specific and robust detection of SARS-CoV-2 and respective variants of concern by the ID NOW COVID-19 device.Peer Reviewe
Differences in signal activation by LH and hCG are mediated by the LH/CG receptor’s extracellular hinge region
The human lutropin (hLH)/choriogonadotropin (hCG) receptor (LHCGR) can be
activated by binding two slightly different gonadotropic glycoprotein
hormones, choriogonadotropin (CG) – secreted by the placenta, and lutropin
(LH) – produced by the pituitary. They induce different signaling profiles at
the LHCGR. This cannot be explained by binding to the receptor’s leucine-rich-
repeat domain (LRRD), as this binding is similar for the two hormones. We
therefore speculate that there are previously unknown differences in the
hormone/receptor interaction at the extracellular hinge region, which might
help to understand functional differences between the two hormones. We have
therefore performed a detailed study of the binding and action of LH and CG at
the LHCGR hinge region. We focused on a primate-specific additional exon in
the hinge region, which is located between LRRD and the serpentine domain. The
segment of the hinge region encoded by exon10 was previously reported to be
only relevant to hLH signaling, as the exon10-deletion receptor exhibits
decreased hLH signaling, but unchanged hCG signaling. We designed an advanced
homology model of the hormone/LHCGR complex, followed by experimental
characterization of relevant fragments in the hinge region. In addition, we
examined predictions of a helical exon10-encoded conformation by block-wise
polyalanine (helix supporting) mutations. These helix preserving modifications
showed no effect on hormone-induced signaling. However, introduction of a
structure-disturbing double-proline mutant LHCGR-Q303P/E305P within the
exon10-helix has, in contrast to exon10-deletion, no impact on hLH, but only
on hCG signaling. This opposite effect on signaling by hLH and hCG can be
explained by distinct sites of hormone interaction in the hinge region. In
conclusion, our analysis provides details of the differences between hLH- and
hCG-induced signaling that are mainly determined in the L2-beta loop of the
hormones and in the hinge region of the receptor
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