152 research outputs found
First-order multi-k phase transitions and magnetoelectric effects in multiferroic Co3TeO6
A theoretical description of the sequence of magnetic phases in Co3TeO6 is
presented. The strongly first-order character of the transition to the
commensurate multiferroic ground state, induced by coupled order parameters
corresponding to different wavevectors, is related to a large magnetoelastic
effect with an exchange energy critically sensitive to the interatomic spacing.
The monoclinic magnetic symmetry C2' of the multiferroic phase permits
spontaneous polarization and magnetization as well as the linear
magnetoelectric effect. The existence of weakly ferromagnetic domains is
verified experimentally by second harmonic generation measurements
A Pipeline for Classifying Deleterious Coding Mutations in Agricultural Plants
The impact of deleterious variation on both plant fitness and crop productivity is not completely understood and is a hot topic of debates. The deleterious mutations in plants have been solely predicted using sequence conservation methods rather than function-based classifiers due to lack of well-annotated mutational datasets in these organisms. Here, we developed a machine learning classifier based on a dataset of deleterious and neutral mutations in Arabidopsis thaliana by extracting 18 informative features that discriminate deleterious mutations from neutral, including 9 novel features not used in previous studies. We examined linear SVM, Gaussian SVM, and Random Forest classifiers, with the latter performing best. Random Forest classifiers exhibited a markedly higher accuracy than the popular PolyPhen-2 tool in the Arabidopsis dataset. Additionally, we tested whether the Random Forest, trained on the Arabidopsis dataset, accurately predicts deleterious mutations in Orýza sativa and Pisum sativum and observed satisfactory levels of performance accuracy (87% and 93%, respectively) higher than obtained by the PolyPhen-2. Application of Transfer learning in classifiers did not improve their performance. To additionally test the performance of the Random Forest classifier across different angiosperm species, we applied it to annotate deleterious mutations in Cicer arietinum and validated them using population frequency data. Overall, we devised a classifier with the potential to improve the annotation of putative functional mutations in QTL and GWAS hit regions, as well as for the evolutionary analysis of proliferation of deleterious mutations during plant domestication; thus optimizing breeding improvement and development of new cultivars
Soliton propagation through a disordered system:statistics of the transmission delay
We have studied the soliton propagation through a segment containing random pointlike scatterers. In the limit of small concentration of scatterers when the mean distance between the scatterers is larger than the soliton width, a method has been developed for obtaining the statistical characteristics of the soliton transmission through the segment. The method is applicable for any classical particle traversing through a disordered segment with the given velocity transformation after each act of scattering. In the case of weak scattering and relatively short disordered segment the transmission time delay of a fast soliton is mostly determined by the shifts of the soliton center after each act of scattering. For sufficiently long segments the main contribution to the delay is due to the shifts of the amplitude and velocity of a fast soliton after each scatterer. Corresponding crossover lengths for both cases of light and heavy solitons have been obtained. We have also calculated the exact probability density function of the soliton transmission time delay for a sufficiently long segment. In the case of weak identical scatterers the latter is a universal function which depends on a sole parameter—the mean number of scatterers in a segment
Solvencia del Instituto de Gestión de la Ciudad en Estimaciones de la Población del Sur de Rusia: Historia y Perspectivas
Este artÃculo interpreta los resultados de una encuesta sociológica masiva realizada entre la población de los municipios de la región de Rostov y la República de Adygea, con el fin de determinar la viabilidad social del Instituto de gestión de la ciudad. La competencia social se define como el logro de los principales objetivos establecidos para el Instituto de gestión de la ciudad, principalmente, la participación de gerentes profesionales para mejorar los indicadores de desarrollo socioeconómico de los territorios. Se definen cuatro aspectos como criterios de evaluación: confianza en la reforma, objetivos de la reforma,
satisfacción con la reforma y expectativa de las consecuencias de la reforma. Los autores llegaron a la conclusión de que una masa significativa de la población no confÃa en la reforma, ve en ella otros objetivos que los declarados por el legislador, no está satisfecha con los resultados y teme la aparición de consecuencias negativas de su implementación.
Al mismo tiempo, hay otros resultados de la introducción de la gestión de la ciudad, ya que hay grupos estables de encuestados que expresaron una actitud positiva hacia ella,
lo que se muestra de manera consistente en todos los aspectos de la evaluación, incluido el rechazo de la importancia de institución de alcaldes electos
Higher-harmonic generation in boron-doped silicon from band carriers and bound-dopant photoionization
We investigate ultrafast harmonic generation (HG) in Si:B, driven by intense pump pulses with fields reaching 100 kV/cm and a carrier frequency of 300 GHz, at 4 K and 300 K, both experimentally and theoretically. We report several findings concerning the nonlinear charge carrier dynamics in intense sub-THz fields: (i) Harmonics of order up to n = 9 are observed at room temperature, while at low temperature we can resolve harmonics reaching at least n = 11. The susceptibility per charge carrier at moderate field strength is as high as for charge carriers in graphene, considered to be one of the materials with the strongest sub-THz nonlinear response. (ii) For T = 300 K, where the charge carriers bound to acceptors are fully thermally ionized into the valence subbands,
the susceptibility values decrease with increasing field strength. Simulations incorporating multi-valence-band Monte Carlo and finite-difference-time-domain (FDTD) propagation show that here, the HG process becomes increasingly dominated by energy-dependent scattering rates over the contribution from band nonparabolicity, due to the onset of optical-phonon emission, which ultimately leads to the saturation at high fields. (iii) At T = 4 K, where the majority of charges are bound to acceptors, we observe a drastic rise of the HG yields for internal pump fields of 30 kV/cm, as one reaches the threshold for tunnel ionization. We disentangle the HG nonlinear response into contributions associated with the initial photoionization and subsequent motion in the bands, and show that intracycle scattering seriously degrades any contribution to HG emission from coherent recollision of the holes with their parent ions
Structural insights into thrombolytic activity of destabilase from medicinal leech
Destabilase from the medical leech Hirudo medicinalis belongs to the family of i-type lysozymes. It has two different enzymatic activities: microbial cell walls destruction (muramidase activity), and dissolution of the stabilized fibrin (isopeptidase activity). Both activities are known to be inhibited by sodium chloride at near physiological concentrations, but the structural basis remains unknown. Here we present two crystal structures of destabilase, including a 1.1 Å-resolution structure in complex with sodium ion. Our structures reveal the location of sodium ion between Glu34/Asp46 residues, which were previously recognized as a glycosidase active site. While sodium coordination with these amino acids may explain inhibition of the muramidase activity, its influence on previously suggested Ser49/Lys58 isopeptidase activity dyad is unclear. We revise the Ser49/Lys58 hypothesis and compare sequences of i-type lysozymes with confirmed destabilase activity. We suggest that the general base for the isopeptidase activity is His112 rather than Lys58. pKa calculations of these amino acids, assessed through the 1 μs molecular dynamics simulation, confirm the hypothesis. Our findings highlight the ambiguity of destabilase catalytic residues identification and build foundations for further research of structure–activity relationship of isopeptidase activity as well as structure-based protein design for potential anticoagulant drug development.</p
Terahertz-slicing -- an all-optical synchronization for 4th generation light sources
A conceptually new approach to synchronizing accelerator-based light sources and external laser systems is presented. The concept is based on utilizing a sufficiently intense accelerator-based single-cycle terahertz pulse to slice a thereby intrinsically synchronized femtosecond-level part of a longer picosecond laser pulse in an electro-optic crystal. A precise synchronization of the order of 10 fs is demonstrated, allowing for real-time lock-in amplifier signal demodulation. We demonstrate successful operation of the concept with three benchmark experiments using a 4th generation accelerator-based terahertz light source, i.e. (i) far-field terahertz time-domain spectroscopy, (ii) terahertz high harmonic generation spectroscopy, and (iii) terahertz scattering-type scanning near-field optical microscopy
Tunable room temperature nonlinear Hall effect from the surfaces of elementary bismuth thin films
The nonlinear Hall effect (NLHE) with time-reversal symmetry constitutes the
appearance of a transverse voltage quadratic in the applied electric field. It
is a second-order electronic transport phenomenon that induces frequency
doubling and occurs in non-centrosymmetric crystals with large Berry curvature
-- an emergent magnetic field encoding the geometric properties of electronic
wavefunctions. The design of (opto)electronic devices based on the NLHE is
however hindered by the fact that this nonlinear effect typically appears at
low temperatures and in complex compounds characterized by Dirac or Weyl
electrons. Here, we show a strong room temperature NLHE in the centrosymmetric
elemental material bismuth synthesized in the form of technologically relevant
polycrystalline thin films. The () surface electrons of this material
are equipped with a Berry curvature triple that activates side jumps and skew
scatterings generating nonlinear transverse currents. We also report a boost of
the zero field nonlinear transverse voltage in arc-shaped bismuth stripes due
to an extrinsic geometric classical counterpart of the NLHE. This electrical
frequency doubling in curved geometries is then extended to optical second
harmonic generation in the terahertz (THz) spectral range. The strong nonlinear
electrodynamical responses of the surface states are further demonstrated by a
concomitant highly efficient THz third harmonic generation which we achieve in
a broad range of frequencies in Bi and Bi-based heterostructures. Combined with
the possibility of growth on CMOS-compatible and mechanically flexible
substrates, these results highlight the potential of Bi thin films for THz
(opto)electronic applications.Comment: 44 pages, 21 figure
Impulsive Fermi magnon-phonon resonance in antiferromagnetic
Understanding spin-lattice interactions in antiferromagnets is one of the
most fundamental issues at the core of the recently emerging and booming fields
of antiferromagnetic spintronics and magnonics. Recently, coherent nonlinear
spin-lattice coupling was discovered in an antiferromagnet which opened the
possibility to control the nonlinear coupling strength and thus showing a novel
pathway to coherently control magnon-phonon dynamics. Here, utilizing intense
narrow band terahertz (THz) pulses and tunable magnetic fields up to 7 T, we
experimentally realize the conditions of the Fermi magnon-phonon resonance in
antiferromagnetic . These conditions imply that both the spin and the
lattice anharmonicities harvest energy transfer between the subsystems, if the
magnon eigenfrequency is twice lower than the frequency of the phonon
. Performing THz pump-infrared probe spectroscopy in conjunction
with simulations, we explore the coupled magnon-phonon dynamics in the vicinity
of the Fermi-resonance and reveal the corresponding fingerprints of an
impulsive THz-induced response. This study focuses on the role of nonlinearity
in spin-lattice interactions, providing insights into the control of coherent
magnon-phonon energy exchange
Rational dimension of a basis of a regression model for adaptive short-term forecasting the state of a discrete nonstationary dynamic system
Relevance. Today, there are many methodologies for predicting power consumption of various objects. However, there is no a general methodology that is suitable for all types of energy systems, including the sectoral characteristics of small northern settlements and other objects with the stochastic nature of electricity consumption schedules. At the same time, during the development of problem-oriented forecasting methods, it is necessary to take into account computational and statistical features of forecasted time series to the maximum and apply them adequately. The mentioned circumstance prompts the creation of criteria-indicators that allow evaluating the quality of the applied model for solving the forecasting problem, correctness of its construction and correctness of applying a priori information about the object and its physical properties.Aim. Develop and apply the criteria-indicators, which allow evaluating the quality of the forecast regression model and the influence of the dimensionality of such model base on a forecasting error. Methods. The choice of rational dimensionality of the regression model basis for the adaptive forecasting problem is based on the known and developed criteria-indicators. The main provisions of such criteria-indicators were formulated, which provide an assessment of the quality of conditioning of an equivalent square matrix, the presence of uninformative elements of the matrix, and linear dependence of the columns. Results. Based on the analysis of criteria-indicators, the authors selected a rational dimension of the regression model basis for the problem of adaptive short-term forecasting of the state of discrete non-stationary dynamic systems. Conclusions. The authors have previously selected the most promising criteria-indicators and developed a normalized difference factor of diagonal predominance. This allows us to evaluate the influence of the basis size change on the regression model quality when building an approach of adaptive short-term forecasting of electricity consumption by autonomous power systems of small northern settlements on the basis of regression analysis methods. Based on the analysis of criteria-indicators the authors obtained information about the influence of the regression model basis dimension on the forecasting problem solution error. The authors stated the further stages of research to reduce this error. The paper introduces and describes one of the ways to improve the forecasting model quality. The dependence of the forecasting error on the size of the regression model basis were revealed; the criteria-indicators considered in the article were successfully applied. It is confirmed that the pre-selected and developed criteria-indicators make it possible, at the stage of compiling an equivalent square matrix and performing preliminary actions on it, to track changes within the matrix. The changes will lead to improvement in the solution of the problem of adaptive short-term forecasting
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