Curvature of Double-Membrane Organelles Generated by Changes in Membrane Size and Composition

Transient double-membrane organelles are key players in cellular processes such as autophagy, reproduction, and viral infection. These organelles are formed by the bending and closure of flat, double-membrane sheets. Proteins are believed to be important in these morphological transitions but the underlying mechanism of curvature generation is poorly understood. Here, we describe a novel mechanism for this curvature generation which depends primarily on three membrane properties: the lateral size of the double-membrane sheets, the molecular composition of their highly curved rims, and a possible asymmetry between the two flat faces of the sheets. This mechanism is evolutionary advantageous since it does not require active processes and is readily available even when resources within the cell are restricted as during starvation, which can induce autophagy and sporulation. We identify pathways for protein-assisted regulation of curvature generation, organelle size, direction of bending, and morphology. Our theory also provides a mechanism for the stabilization of large double-membrane sheet-like structures found in the endoplasmic reticulum and in the Golgi cisternae

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1.

In 2008, we published the first set of guidelines for standardizing research in autophagy. Since then, this topic has received increasing attention, and many scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Thus, it is important to formulate on a regular basis updated guidelines for monitoring autophagy in different organisms. Despite numerous reviews, there continues to be confusion regarding acceptable methods to evaluate autophagy, especially in multicellular eukaryotes. Here, we present a set of guidelines for investigators to select and interpret methods to examine autophagy and related processes, and for reviewers to provide realistic and reasonable critiques of reports that are focused on these processes. These guidelines are not meant to be a dogmatic set of rules, because the appropriateness of any assay largely depends on the question being asked and the system being used. Moreover, no individual assay is perfect for every situation, calling for the use of multiple techniques to properly monitor autophagy in each experimental setting. Finally, several core components of the autophagy machinery have been implicated in distinct autophagic processes (canonical and noncanonical autophagy), implying that genetic approaches to block autophagy should rely on targeting two or more autophagy-related genes that ideally participate in distinct steps of the pathway. Along similar lines, because multiple proteins involved in autophagy also regulate other cellular pathways including apoptosis, not all of them can be used as a specific marker for bona fide autophagic responses. Here, we critically discuss current methods of assessing autophagy and the information they can, or cannot, provide. Our ultimate goal is to encourage intellectual and technical innovation in the field

Sensitivity of potential natural vegetation in China to projected changes in temperature, precipitation and atmospheric CO2

A sensitivity study was performed to investigate the responses of potential natural vegetation distribution in China to the separate and combined effects of temperature, precipitation and [CO₂], using the process-based equilibrium terrestrial biosphere model BIOME4. The model shows a generally good agreement with a map of the potential natural vegetation distribution based on a numerical comparison using the ΔV statistic (ΔV = 0.25). Mean temperature of each month was increased uniformly by 0-5 K, in 0. 5- or 1-K intervals. Mean precipitation of each month was increased and decreased uniformly by 0-30%, in 10% intervals. The analyses were run at fixed CO₂ concentrations of 360 and 720 ppm. Temperature increases shifted most forest boundaries northward and westward, expanded the distribution of xeric biomes, and confined the tundra to progressively higher elevations. Precipitation increases led to a greater area occupied by mesic biomes at the expense of xeric biomes. Most vegetation types in the temperate regions, and on the Tibetan Plateau, expanded westward into the dry continental interior with increasing precipitation. Precipitation decreases had opposite effects. The modelled effect of CO₂ doubling was to partially compensate for the negative effect of drought on the mesic biomes and to increase potential ecosystem carbon storage by about 40%. Warming tended to counteract this effect, by reducing soil carbon storage. Forest biomes showed substantial resilience to climate change, especially when the effects of increasing [CO₂] were taken into account. Savannas, dry woodland and tundra biomes proved sensitive to temperature increases. The transition region of grassland and forest, and the Tibetan plateau, was the most vulnerable region. An erratum for this article appeared in Regional environmental change, Vol. 11, No. 3, (2011), p.729, and may be found at http://dx.doi.org/10.1007/s10113-011-0217-x.13 page(s