Degree of taste discrimination among suspension‐feeding cladocerans and copepods: Implications for detritivory and herbivory

Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/110623/1/lno19913661107.pd

Relative age of interior layered deposits in southwest Candor Chasma based on high-resolution structural mapping

High-resolution topography generated from stereo HiRISE (High-Resolution Imaging Science Experiment) imagery reveals the meter-scale structure of interior layered deposits (ILD) in southwest Candor Chasma. This study seeks to determine the age of the local ILD relative to any normal faults that can be attributed to chasma formation. The study area is located near the contact of these ILD and the wall rock and is in an area where chasma-forming normal faults have been proposed. We find that while normal faults are found in the study area, these faults are not sufficiently large nor appropriately located or oriented to accommodate the roughly northeast-southwest extension that is required for normal faults that can be attributed to chasma formation. Additionally, bedding exposed in the local ILD generally dips toward the center of Candor Chasma, consistent with sediment deposition in a preexisting basin. Further, pit craters of Tithonia Catena, presumed to predate or be contemporaneous with the formation of west Candor Chasma, do not cut into the ILD within the study area. These independent lines of evidence support a postchasma age for the ILD exposed within the study area. Chasma-related normal faults may exist within these ILD at depth but are not exposed at the surface. Approximately 2 km of conformable stratigraphy is exposed in the study area, and therefore at least several kilometers of the local ILD were deposited subsequent to any chasma-related normal faulting that may have occurred in this part of Candor Chasma

Response of greater sage-grouse to surface coal mining and habitat conservation in association with the mine

Greater sage-grouse (Centrocercus urophasianus; sage-grouse) is a sagebrushobligate species that has experienced species-wide declines in population density and distribution. Sage-grouse habitats support human-related needs including domestic livestock grazing, urban development, and energy extraction. The U.S. Fish and Wildlife Service identified energy extraction as a range-wide sage-grouse conservation threat. Mining has been of specific concern because of observed sage-grouse population declines and impaired habitat within close proximity to the activity. Mining may be particularly problematic for small, isolated sage-grouse populations. In southwestern Utah, proactive habitat improvements and predator management have been implemented to mitigate the potential effects of surface mining on the southernmost population of sage-grouse in the United States. We evaluated sage-grouse lek attendance trends before (1991–2010) and during (2011–2016) mining on a lek located near the mine (Sink Valley lek) to assess population responses to coal mining and related mitigation activities. Changes in lek trends have been demonstrated as a valid metric to assess the effects of conservation actions on sage-grouse populations. We used a paired t-test to compare differences in male lek attendance before and during mining and analysis of variance to determine if sage-grouse densities and distance to mining changed during the mining period. We recorded bird coordinate location and the number of birds observed at each sighting location along 10 transects within the study site area. Differences in location from mining was tested using Analysis of Variance with α \u3c 0.5. There was no difference in the number of males attending the Sink Valley lek before and during mining. Population cycles were consistent over the time period sampled. With the exception of 2013, which had an unusually high number of sage-grouse found within the Sink Valley area, there were no differences in the number of birds observed at each sighting location in relation to the mine center (P = 0.37), the coal crushing facility (P = 0.34), and the mine boundary (P = 0.24). Coupled with ongoing mitigation activities including habitat restoration, pinyon-juniper (Pinus edulis, Juniperus osteosperma) removal, aggressive predator control, pre-mining acclimation to human influences, and removal of pinyon-juniper woodlands, surface coal mining had no negative effect on population cycles in the Alton/Sink Valley area

Reversible Silencing of CFTR Chloride Channels by Glutathionylation

The cystic fibrosis transmembrane conductance regulator (CFTR) is a phosphorylation- and ATP-dependent chloride channel that modulates salt and water transport across lung and gut epithelia. The relationship between CFTR and oxidized forms of glutathione is of potential interest because reactive glutathione species are produced in inflamed epithelia where they may be modulators or substrates of CFTR. Here we show that CFTR channel activity in excised membrane patches is markedly inhibited by several oxidized forms of glutathione (i.e., GSSG, GSNO, and glutathione treated with diamide, a strong thiol oxidizer). Three lines of evidence indicate that the likely mechanism for this inhibitory effect is glutathionylation of a CFTR cysteine (i.e., formation of a mixed disulfide with glutathione): (a) channels could be protected from inhibition by pretreating the patch with NEM (a thiol alkylating agent) or by lowering the bath pH; (b) inhibited channels could be rescued by reducing agents (e.g., DTT) or by purified glutaredoxins (Grxs; thiol disulfide oxidoreductases) including a mutant Grx that specifically reduces mixed disulfides between glutathione and cysteines within proteins; and (c) reversible glutathionylation of CFTR polypeptides in microsomes could be detected biochemically under the same conditions. At the single channel level, the primary effect of reactive glutathione species was to markedly inhibit the opening rates of individual CFTR channels. CFTR channel inhibition was not obviously dependent on phosphorylation state but was markedly slowed when channels were first “locked open” by a poorly hydrolyzable ATP analogue (AMP-PNP). Consistent with the latter finding, we show that the major site of inhibition is cys-1344, a poorly conserved cysteine that lies proximal to the signature sequence in the second nucleotide binding domain (NBD2) of human CFTR. This region is predicted to participate in ATP-dependent channel opening and to be occluded in the nucleotide-bound state of the channel based on structural comparisons to related ATP binding cassette transporters. Our results demonstrate that human CFTR channels are reversibly inhibited by reactive glutathione species, and support an important role of the region proximal to the NBD2 signature sequence in ATP-dependent channel opening

Evidence that histidine protonation of receptor-bound anthrax protective antigen is a trigger for pore formation

The protective antigen (PA) component of the anthrax toxin forms pores within the low pH environment of host endosomes, through mechanisms that are poorly understood. It has been proposed that pore formation is dependent on histidine protonation. In previous work, we biosynthetically incorporated 2-fluorohistidine (2-FHis), an isosteric analog of histidine with a significantly reduced pKa (~1), into PA, and showed that the pH-dependent conversion from the soluble prepore to a pore was unchanged. However, we also observed that 2-FHisPA was non-functional in the ability to mediate cytotoxicity of CHO-K1 cells by LFN-DTA, and was defective in translocation through planar lipid bilayers. Here, we show that the defect in cytotoxicity is due to both a defect in translocation and, when bound to the host cellular receptor, an inability to undergo low pH-induced pore formation. Combining X-ray crystallography with hydrogen-deuterium (H-D) exchange mass spectrometry, our studies lead to a model in which hydrogen bonds to the histidine ring are strengthened by receptor binding. The combination of both fluorination and receptor binding is sufficient to block low pH-induced pore formation

A biologist’s guide to planning and performing quantitative bioimaging experiments

Technological advancements in biology and microscopy have empowered a transition from bioimaging as an observational method to a quantitative one. However, as biologists are adopting quantitative bioimaging and these experiments become more complex, researchers need additional expertise to carry out this work in a rigorous and reproducible manner. This Essay provides a navigational guide for experimental biologists to aid understanding of quantitative bioimaging from sample preparation through to image acquisition, image analysis, and data interpretation. We discuss the interconnectedness of these steps, and for each, we provide general recommendations, key questions to consider, and links to high-quality open-access resources for further learning. This synthesis of information will empower biologists to plan and execute rigorous quantitative bioimaging experiments efficiently

On the calculation of effective electric field in In0.53Ga0.47As surface channel metal-oxide-semiconductor field-effect-transistors

The effective electron mobility of In0.53Ga0.47As metal-oxide-semiconductor field-effect-transistors with HfO2 gate oxide was measured over a wide range of channel doping concentration. The back bias dependence of effective electron mobility was used to correctly calculate the vertical effective electric field. The effective electron mobility at moderate to high vertical effective electric field shows universal behavior independent of substrate impurity concentration. (C) 2011 American Institute of Physics. [doi: 10.1063/1.3588255

Physical activity and brain amyloid beta: A longitudinal analysis of cognitively unimpaired older adults

Introduction: The current study evaluated the relationship between habitual physical activity (PA) levels and brain amyloid beta (A ) over 15 years in a cohort of cognitively unimpaired older adults. Methods: PA and A measures were collected over multiple timepoints from 731 cognitively unimpaired older adults participating in the Australian Imaging, Biomarkers and Lifestyle (AIBL) Study of Aging. Regression modeling examined cross-sectional and longitudinal relationships between PA and brain A . Moderation analyses examined apolipoprotein E (APOE) 4 carriage impact on the PA-A relationship. Results: PA was not associated with brain A at baseline ( = –0.001, p = 0.72) or over time ( = –0.26, p = 0.24). APOE 4 status did not moderate the PA-A relationship over time ( = 0.12, p = 0.73). Brain A levels did not predict PA trajectory ( = –54.26, p = 0.59). Discussion: Our study did not identify a relationship between habitual PA and brain A levels. Highlights: Physical activity levels did not predict brain amyloid beta (A ) levels over time in cognitively unimpaired older adults ( ≥ 60 years of age). Apolipoprotein E (APOE) 4 carrier status did not moderate the physical activity–brain A relationship over time. Physical activity trajectories were not impacted by brain A levels

Invasive annual grasses—Reenvisioning approaches in a changing climate

For nearly a century, invasive annual grasses have increasingly impacted terrestrial ecosystems across the western United States. Weather variability associated with climate change and increased atmospheric carbon dioxide (CO2) are making even more difficult the challenges of managing invasive annual grasses. As part of a special issue on climate change impacts on soil and water conservation, the topic of invasive annual grasses is being addressed by scientists at the USDA Agricultural Research Service to emphasize the need for additional research and future studies that build on current knowledge and account for (extreme) changes in abiotic and biotic conditions. Much research has focused on understanding the mechanisms underlying annual grass invasion, as well as assessing patterns and responses from a wide range of disturbances and management approaches. Weather extremes and the increasing occurrences of wildfire are contributing to the complexity of the problem. In broad terms, invasive annual grass management, including restoration, must be proactive to consider human values and ecosystem resiliency. Models capable of synthesizing vast amounts of diverse information are necessary for creating trajectories that could result in the establishment of perennial systems. Organization and collaboration are needed across the research community and with land managers to strategically develop and implement practices that limit invasive annual grasses. In the future, research will need to address invasive annual grasses in an adaptive integrated weed management (AIWM) framework that utilizes models and accounts for climate change that is resulting in altered/new approaches to management and restoration