102 research outputs found
Hydroxylation Structure and Proton Transfer Reactivity at the Zinc Oxide-Water Interface
The hydroxylation structural features of the first
adsorption layer and its connection to proton transfer reactivity have been studied for the ZnO-liquid water interface at room temperature. Molecular dynamics simulations employing the ReaxFF forcefield were performed for water on seven ZnO surfaces with varying step concentrations. At higher water coverage a higher level of hydroxylation was found, in agreement with previous experimental results. We have also calculated the free energy barrier for transferring a proton to the surface, showing that stepped surfaces stabilize the hydroxylated
state and decrease the water dissociation barrier. On highly stepped surfaces the barrier is only 2 kJ/mol or smaller. Outside the first adsorption layer no dissociation events were found during almost 100 ns of simulation time; this indicates that these reactions are much more likely if catalyzed by the metal oxide surface. Also, when exposed to a vacuum, the less stepped surfaces stabilize adsorption beyond monolayer coverage
Water adsorption beyond monolayer coverage on ZnO surfaces and nanoclusters
The surface structures of ZnO surfaces and ZnO nanoparticles, with and without water, were studied with a reactive force field (FF) within the ReaxFF framework, and molecular dynamics (MD) simulations. The force field parameters were fitted to a training set of data points (energies, geometries, charges) derived from quantum-mechanical B3LYP calculations. The ReaxFF model predicts structures and reactions paths at a fraction of the computational cost of the quantum-mechanical calculations. Our simulations give the following results for the (10-10) surface. (i) The alternating H-bond pattern of Meyer et al. for one monolayer coverage is reproduced and maintained at higher temperatures. (ii) Coverages beyond one water monolayer enhances ZnO hydroxylation at the expense of ZnO hydration. (iii) This is achieved through an entirely new H-bond pattern mediated via the water molecules in the second layer above the ZnO surface. (iv) During a desorption process, the desorption rate slows significantly when two monolayers remain. Simulations of nanoparticles in water suggest that these conclusions are relevant also in the nano case
Development and Validation of a ReaxFF Reactive Force Field for Cu Cation/Water Interactions and Copper Metal/Metal Oxide/Metal Hydroxide Condensed Phases
To enable large-scale reactive dynamic simulations of copper oxide/water and copper ion/water interactions we have extended the ReaxFF reactive force field framework to Cu/O/H interactions. To this end, we employed a multistage force field development strategy, where the initial training set (containing metal/metal oxide/metal hydroxide condensed phase data and [Cu(H_2O)_n]^(2+) cluster structures and energies) is augmented by single-point quantum mechanices (QM) energies from [Cu(H_2O)_n]^(2+) clusters abstracted from a ReaxFF molecular dynamics simulation. This provides a convenient strategy to both enrich the training set and to validate the final force field. To further validate the force field description we performed molecular dynamics simulations on Cu^(2+)/water systems. We found good agreement between our results and earlier experimental and QM-based molecular dynamics work for the average Cu/water coordination, Jahn−Teller distortion, and inversion in [Cu(H_2O)_6]^(2+) clusters and first- and second-shell O−Cu−O angular distributions, indicating that this force field gives a satisfactory description of the Cu-cation/water interactions. We believe that this force field provides a computationally convenient method for studying the solution and surface chemistry of metal cations and metal oxides and, as such, has applications for studying protein/metal cation complexes, pH-dependent crystal growth/dissolution, and surface catalysis
Comment on "First-principles study of the influence of (110)-oriented strain on the ferroelectric properties of rutile TiO2"
In a recent article, Gr\"{u}nebohm et al. [Phys. Rev. B 84 132105 (2011),
arXiv:1106.2820] report that they fail to reproduce the A2u ferroelectric
instability of TiO2 in the rutile structure calculated with density functional
theory within the PBE-GGA approximation by Montanari et al. [Chem. Phys. Lett
364, 528 (2002)]. We demonstrate that this disagreement arises from an
erroneous treatment of Ti 3s and 3p semi-core electrons as core in their
calculations. Fortuitously the effect of the frozen semi-core pseudopotential
cancels the phonon instability of the PBE exchange-correlation, and the
combination yields phonon frequencies similar to the LDA harmonic values.
Gr\"{u}nebohm et al. also attempted and failed to reproduce the soft acoustic
phonon mode instability under (110) strain reported by Mitev et al. [Phys. Rev.
B 81 134303 (2010)]. For this mode the combination of PBE-GGA and frozen
semi-core yields a small imaginary frequency of 9.8i. The failure of
Gr\"{u}nebohm et al. to find this mode probably arose from numerical
limitations of the geometry optimization approach in the presence of a shallow
double well potential; the optimization method is not suitable for locating
such instabilities.Comment: 5 page
Effects of H-bond asymmetry on the electronic properties of liquid water – An AIMD analysis
The effects of an asymmetric environment on the electronic properties of a water molecule in liquid water are in focus in this paper and were analysed from ab initio molecular dynamics simulations of liquid water at 300 and 350 K with the BLYP-D3 functional. We make the following observations. (1) The electronic DOS and the net molecular charge are more affected by the asymmetry of the water molecule's H-bond surroundings than by the number of H-bonded neighbours. The reverse is true for the dipole moment. (2) For all three properties, a 3-coordinated water molecule is more perturbed by accepting two H-bonds and donating one than by donating two and accepting one. (3) This order is not maintained in the calculated XES spectrum, which is less straightforward to interpret in terms of structure-property relationships than the DOS spectrum
Evolutionary Monte Carlo of QM properties in chemical space: Electrolyte design
Optimizing a target function over the space of organic molecules is an
important problem appearing in many fields of applied science, but also a very
difficult one due to the vast number of possible molecular systems. We propose
an Evolutionary Monte Carlo algorithm for solving such problems which is
capable of straightforwardly tuning both exploration and exploitation
characteristics of an optimization procedure while retaining favourable
properties of genetic algorithms. The method, dubbed MOSAiCS (Metropolis
Optimization by Sampling Adaptively in Chemical Space), is tested on problems
related to optimizing components of battery electrolytes, namely minimizing
solvation energy in water or maximizing dipole moment while enforcing a lower
bound on the HOMO-LUMO gap; optimization was done over sets of molecular graphs
inspired by QM9 and Electrolyte Genome Project (EGP) datasets. MOSAiCS reliably
generated molecular candidates with good target quantity values, which were in
most cases better than the ones found in QM9 or EGP. While the optimization
results presented in this work sometimes required up to QM
calculations and were thus only feasible thanks to computationally efficient ab
initio approximations of properties of interest, we discuss possible strategies
for accelerating MOSAiCS using machine learning approaches
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