A global descriptor of spatial pattern interaction in the galaxy distribution

We present the function J as a morphological descriptor for point patterns formed by the distribution of galaxies in the Universe. This function was recently introduced in the field of spatial statistics, and is based on the nearest neighbor distribution and the void probability function. The J descriptor allows to distinguish clustered (i.e. correlated) from ``regular'' (i.e. anti-correlated) point distributions. We outline the theoretical foundations of the method, perform tests with a Matern cluster process as an idealised model of galaxy clustering, and apply the descriptor to galaxies and loose groups in the Perseus-Pisces Survey. A comparison with mock-samples extracted from a mixed dark matter simulation shows that the J descriptor can be profitably used to constrain (in this case reject) viable models of cosmic structure formation.Comment: Significantly enhanced version, 14 pages, LaTeX using epsf, aaspp4, 7 eps-figures, accepted for publication in the Astrophysical Journa

Luminosity- and morphology-dependent clustering of galaxies

How does the clustering of galaxies depend on their inner properties like morphological type and luminosity? We address this question in the mathematical framework of marked point processes and clarify the notion of luminosity and morphological segregation. A number of test quantities such as conditional mark-weighted two-point correlation functions are introduced. These descriptors allow for a scale-dependent analysis of luminosity and morphology segregation. Moreover, they break the degeneracy between an inhomogeneous fractal point set and actual present luminosity segregation. Using the Southern Sky Redshift Survey~2 (da Costa et al. 1998, SSRS2) we find both luminosity and morphological segregation at a high level of significance, confirming claims by previous works using these data (Benoist et al. 1996, Willmer et al. 1998). Specifically, the average luminosity and the fluctuations in the luminosity of pairs of galaxies are enhanced out to separations of 15Mpc/h. On scales smaller than 3Mpc/h the luminosities on galaxy pairs show a tight correlation. A comparison with the random-field model indicates that galaxy luminosities depend on the spatial distribution and galaxy-galaxy interactions. Early-type galaxies are also more strongly correlated, indicating morphological segregation. The galaxies in the PSCz catalog (Saunders et al. 2000) do not show significant luminosity segregation. This again illustrates that mainly early-type galaxies contribute to luminosity segregation. However, based on several independent investigations we show that the observed luminosity segregation can not be explained by the morphology-density relation alone.Comment: aastex, emulateapj5, 20 pages, 13 figures, several clarifying comments added, ApJ accepte

Morphological fluctuations of large-scale structure: the PSCz survey

In a follow-up study to a previous analysis of the IRAS 1.2Jy catalogue, we quantify the morphological fluctuations in the PSCz survey. We use a variety of measures, among them the family of scalar Minkowski functionals. We confirm the existence of significant fluctuations that are discernible in volume-limited samples out to 200Mpc/h. In contrast to earlier findings, comparisons with cosmological N-body simulations reveal that the observed fluctuations roughly agree with the cosmic variance found in corresponding mock samples. While two-point measures, e.g. the variance of count-in-cells, fluctuate only mildly, the fluctuations in the morphology on large scales indicate the presence of coherent structures that are at least as large as the sample

Magnification by Galaxy Group Dark Matter Halos

We report on the detection of gravitational lensing magnification by a population of galaxy groups, at a significance level of 4.9 sigma. Using X-ray selected groups in the COSMOS 1.64 deg^2 field, and high-redshift Lyman break galaxies as sources, we measure a lensing-induced angular cross-correlation between the samples. After satisfying consistency checks that demonstrate we have indeed detected a magnification signal, and are not suffering from contamination by physical overlap of samples, we proceed to implement an optimally weighted cross-correlation function to further boost the signal to noise of the measurement. Interpreting this optimally weighted measurement allows us to study properties of the lensing groups. We model the full distribution of group masses using a composite-halo approach, considering both the singular isothermal sphere and Navarro-Frenk-White profiles, and find our best fit values to be consistent with those recovered using the weak-lensing shear technique. We argue that future weak-lensing studies will need to incorporate magnification along with shear, both to reduce residual systematics and to make full use of all available source information, in an effort to maximize scientific yield of the observations.Comment: 6 pages, 3 figures, Accepted by Ap

Structural insight into SUMO chain recognition and manipulation by the ubiquitin ligase RNF4

The small ubiquitin-like modifier (SUMO) can form polymeric chains that are important signals in cellular processes such as meiosis, genome maintenance and stress response. The SUMO-targeted ubiquitin ligase RNF4 engages with SUMO chains on linked substrates and catalyses their ubiquitination, which targets substrates for proteasomal degradation. Here we use a segmental labelling approach combined with solution nuclear magnetic resonance (NMR) spectroscopy and biochemical characterization to reveal how RNF4 manipulates the conformation of the SUMO chain, thereby facilitating optimal delivery of the distal SUMO domain for ubiquitin transfer

Dark Energy from structure: a status report

The effective evolution of an inhomogeneous universe model in any theory of gravitation may be described in terms of spatially averaged variables. In Einstein's theory, restricting attention to scalar variables, this evolution can be modeled by solutions of a set of Friedmann equations for an effective volume scale factor, with matter and backreaction source terms. The latter can be represented by an effective scalar field (`morphon field') modeling Dark Energy. The present work provides an overview over the Dark Energy debate in connection with the impact of inhomogeneities, and formulates strategies for a comprehensive quantitative evaluation of backreaction effects both in theoretical and observational cosmology. We recall the basic steps of a description of backreaction effects in relativistic cosmology that lead to refurnishing the standard cosmological equations, but also lay down a number of challenges and unresolved issues in connection with their observational interpretation. The present status of this subject is intermediate: we have a good qualitative understanding of backreaction effects pointing to a global instability of the standard model of cosmology; exact solutions and perturbative results modeling this instability lie in the right sector to explain Dark Energy from inhomogeneities. It is fair to say that, even if backreaction effects turn out to be less important than anticipated by some researchers, the concordance high-precision cosmology, the architecture of current N-body simulations, as well as standard perturbative approaches may all fall short in correctly describing the Late Universe.Comment: Invited Review for a special Gen. Rel. Grav. issue on Dark Energy, 59 pages, 2 figures; matches published versio

The Angular Three-Point Correlation Function in the Quasilinear Regime

We calculate the normalized angular three-point correlation function (3PCF), $q$, as well as the normalized angular skewness, $s_3$, assuming the small-angle approximation, for a biased mass distribution in flat and open cold-dark-matter (CDM) models with Gaussian initial conditions. The leading-order perturbative results incorporate the explicit dependence on the cosmological parameters, the shape of the CDM transfer function, the linear evolution of the power spectrum, the form of redshift distribution function, and linear and nonlinear biasing, which may be evolving. Results are presented for different redshift distributions, including that appropriate for the APM Galaxy Survey, as well as for a survey with a mean redshift of $\bar{z} \simeq 1$ (such as the VLA FIRST Survey). Qualitatively, many of the results found for $s_3$ and $q$ are similar to those obtained in a related treatment of the spatial skewness and 3PCF (Buchalter & Kamionkowski 1999), such as a leading-order correction to the standard result for $s_3$ in the case of nonlinear bias (as defined for unsmoothed density fields), and the sensitivity of the configuration dependence of $q$ to both cosmological and biasing models. We show that since angular CFs are sensitive to clustering over a range of redshifts, the various evolutionary dependences included in our predictions imply that measurements of $q$ in a deep survey might better discriminate between models with different histories, such as evolving vs. non-evolving bias, that can have similar spatial CFs at low redshift. Our calculations employ a derived equation---valid for open, closed, and flat models---for obtaining the angular bispectrum from the spatial bispectrum in the small-angle approximation.Comment: 45 pages, including 11 Figures, submitted to the Astrophysical Journa

Perturbative Analysis of Adaptive Smoothing Methods in Quantifying Large-Scale Structure

Smoothing operation to make continuous density field from observed point-like distribution of galaxies is crucially important for topological or morphological analysis of the large-scale structure, such as, the genus statistics or the area statistics (equivalently the level crossing statistics). It has been pointed out that the adaptive smoothing filters are more efficient tools to resolve cosmic structures than the traditional spatially fixed filters. We study weakly nonlinear effects caused by two representative adaptive methods often used in smoothed hydrodynamical particle (SPH) simulations. Using framework of second-order perturbation theory, we calculate the generalized skewness parameters for the adaptive methods in the case of initially power-law fluctuations. Then we apply the multidimensional Edgeworth expansion method and investigate weakly nonlinear evolution of the genus statistics and the area statistics. Isodensity contour surfaces are often parameterized by the volume fraction of the regions above a given density threshold. We also discuss this parameterization method in perturbative manner.Comment: 42 pages including 9 figure, ApJ 537 in pres

The phase-space structure of a dark-matter halo: Implications for dark-matter direct detection experiments

We study the phase-space structure of a dark-matter halo formed in a high resolution simulation of a Lambda CDM cosmology. Our goal is to quantify how much substructure is left over from the inhomogeneous growth of the halo, and how it may affect the signal in experiments aimed at detecting the dark matter particles directly. If we focus on the equivalent of ``Solar vicinity'', we find that the dark-matter is smoothly distributed in space. The probability of detecting particles bound within dense lumps of individual mass less than 10^7 M_\sun h^{-1} is small, less than 10^{-2}. The velocity ellipsoid in the Solar neighbourhood deviates only slightly from a multivariate Gaussian, and can be thought of as a superposition of thousands of kinematically cold streams. The motions of the most energetic particles are, however, strongly clumped and highly anisotropic. We conclude that experiments may safely assume a smooth multivariate Gaussian distribution to represent the kinematics of dark-matter particles in the Solar neighbourhood. Experiments sensitive to the direction of motion of the incident particles could exploit the expected anisotropy to learn about the recent merging history of our Galaxy.Comment: 13 pages, 13 figures, Phys. Rev. D in press. Postscript version with high resolution figures available from http://www.mpa-garching.mpg.de/~ahelmi/research/lcdm_dm.html; some changes in the text; constraints on the effect of bound dark-matter lumps revised; remaining conclusions unchange