Structural analysis of the architecture and in situ localization of the main S-layer complex in Deinococcus radiodurans

Bacterial surface layers are paracrystalline assemblies of proteins that provide the first line of defense against environmental shocks. Here, we report the 3D structure, in situ localization, and orientation of the S-layer deinoxanthin-binding complex (SDBC), a hetero-oligomeric assembly of proteins that in Deinococcus radiodurans represents the main S-layer unit. The SDBC is resolved at 11-Å resolution by single-particle analysis, while its in situ localization is determined by cryo-electron crystallography on intact cell-wall fragments leading to a projection map at 4.5-Å resolution. The SDBC exhibits a triangular base with three comma-shaped pores, and a stalk departing orthogonally from the center of the base and oriented toward the intracellular space. Combining state-of-the-art techniques, results show the organization of this S-layer and its connection within the underlying membranes, demonstrating the potential for applications from nanotechnologies to medicine

Non-Photochemical Quenching in Cryptophyte Alga Rhodomonas salina Is Located in Chlorophyll a/c Antennae

Photosynthesis uses light as a source of energy but its excess can result in production of harmful oxygen radicals. To avoid any resulting damage, phototrophic organisms can employ a process known as non-photochemical quenching (NPQ), where excess light energy is safely dissipated as heat. The mechanism(s) of NPQ vary among different phototrophs. Here, we describe a new type of NPQ in the organism Rhodomonas salina, an alga belonging to the cryptophytes, part of the chromalveolate supergroup. Cryptophytes are exceptional among photosynthetic chromalveolates as they use both chlorophyll a/c proteins and phycobiliproteins for light harvesting. All our data demonstrates that NPQ in cryptophytes differs significantly from other chromalveolates – e.g. diatoms and it is also unique in comparison to NPQ in green algae and in higher plants: (1) there is no light induced xanthophyll cycle; (2) NPQ resembles the fast and flexible energetic quenching (qE) of higher plants, including its fast recovery; (3) a direct antennae protonation is involved in NPQ, similar to that found in higher plants. Further, fluorescence spectroscopy and biochemical characterization of isolated photosynthetic complexes suggest that NPQ in R. salina occurs in the chlorophyll a/c antennae but not in phycobiliproteins. All these results demonstrate that NPQ in cryptophytes represents a novel class of effective and flexible non-photochemical quenching

Functional architecture of higher plant photosystem II supercomplexes

Photosystem II (PSII) is a large multiprotein complex, which catalyses water splitting and plastoquinone reduction necessary to transform sunlight into chemical energy. Detailed functional and structural studies of the complex from higher plants have been hampered by the impossibility to purify it to homogeneity. In this work, homogeneous preparations ranging from a newly identified particle composed by a monomeric core and antenna proteins to the largest C2S2M2 supercomplex were isolated. Characterization by biochemical methods and single particle electron microscopy allowed to relate for the first time the supramolecular organization to the protein content. A projection map of C2S2M2 at 12 Å resolution was obtained, which allowed determining the location and the orientation of the antenna proteins. Comparison of the supercomplexes obtained from WT and Lhcb-deficient plants reveals the importance of the individual subunits for the supramolecular organization. The functional implications of these findings are discussed and allow redefining previous suggestions on PSII energy transfer, assembly, photoinhibition, state transition and non-photochemical quenching

Photosystem II Supercomplexes Of Higher Plants:Isolation And Determination Of The Structural And Functional Organization

Photosystem II is a supercomplex composed of 27-28 different subunits and it represents the most important machinery of the plants photosynthetic appara- tus, having the ability to split water into oxygen, protons and electrons. In the last few years the structures of most of the photosynthetic complexes have been resolved, allowing to organize in a ‘‘visual framework’’ the large body of information obtained by genetics, biochemical and spectroscopic methods about the function and organization of the complexes. Only the struc- ture of PSII-LHCII from higher plants is still lacking due to the impossibility to obtain a homogeneous and stable preparation of the supercomplex, which has also prevented functional and spectroscopic studies.In this work homogeneous and stable Photosystem II supercomplexes with dif- ferent antenna size were isolated. A full gallery of complexes, from the core to the largest C2S2M2, was characterized by electron microscopy and biochemi- cal and spectroscopic methods, allowing to relate for the first time the supramo- lecular organization to the protein and pigment content and the energy transfer processes. A new complex containing a monomeric core, a trimeric LHCII (S) and a monomeric CP26 was isolated, showing that the antenna proteins can bind to the monomeric core in contrast to the current belief. The comparison of the supercomplexes obtained from WT plants and knock out mutants of sev- eral Lhcb proteins allowed determining the hierarchy of the assembly and to suggest a role for the individual subunits. The data also provides information about the organization of the oxygen evolving complex. For the first time it was possible to study the energy transfer process in the supercomplexes with the use of picosecond fluorescence spectroscopy.The functional implication of these results on photoinhibition, state transition and energy transfer are discussed

Photosystem II Supercomplexes Of Higher Plants: Isolation And Determination Of The Structural And Functional Organization

Photosystem II is a supercomplex composed of 27-28 different subunits and it represents the most important machinery of the plants photosynthetic appara- tus, having the ability to split water into oxygen, protons and electrons. In the last few years the structures of most of the photosynthetic complexes have been resolved, allowing to organize in a ‘‘visual framework’’ the large body of information obtained by genetics, biochemical and spectroscopic methods about the function and organization of the complexes. Only the struc- ture of PSII-LHCII from higher plants is still lacking due to the impossibility to obtain a homogeneous and stable preparation of the supercomplex, which has also prevented functional and spectroscopic studies. In this work homogeneous and stable Photosystem II supercomplexes with dif- ferent antenna size were isolated. A full gallery of complexes, from the core to the largest C2S2M2, was characterized by electron microscopy and biochemi- cal and spectroscopic methods, allowing to relate for the first time the supramo- lecular organization to the protein and pigment content and the energy transfer processes. A new complex containing a monomeric core, a trimeric LHCII (S) and a monomeric CP26 was isolated, showing that the antenna proteins can bind to the monomeric core in contrast to the current belief. The comparison of the supercomplexes obtained from WT plants and knock out mutants of sev- eral Lhcb proteins allowed determining the hierarchy of the assembly and to suggest a role for the individual subunits. The data also provides information about the organization of the oxygen evolving complex. For the first time it was possible to study the energy transfer process in the supercomplexes with the use of picosecond fluorescence spectroscopy. The functional implication of these results on photoinhibition, state transition and energy transfer are discussed