Genetic Dissection of Root Angle of Brassica napus in Response to Low Phosphorus

Plant root angle determines the vertical and horizontal distribution of roots in the soil layer, which further influences the acquisition of phosphorus (P) in topsoil. Large genetic variability for the lateral root angle (root angle) was observed in a linkage mapping population (BnaTNDH population) and an association panel of Brassica napus whether at a low P (LP) or at an optimal P (OP). At LP, the average root angle of both populations became smaller. Nine quantitative trait loci (QTLs) at LP and three QTLs at OP for the root angle and five QTLs for the relative root angle (RRA) were identified by the linkage mapping analysis in the BnaTNDH population. Genome-wide association studies (GWASs) revealed 11 single-nucleotide polymorphisms (SNPs) significantly associated with the root angle at LP (LPRA). The interval of a QTL for LPRA on A06 (qLPRA-A06c) overlapped with the confidence region of the leading SNP (Bn-A06-p14439400) significantly associated with LPRA. In addition, a QTL cluster on chromosome C01 associated with the root angle and the primary root length (PRL) in the “pouch and wick” high-throughput phenotyping (HTP) system, the root P concentration in the agar system, and the seed yield in the field was identified in the BnaTNDH population at LP. A total of 87 genes on A06 and 192 genes on C01 were identified within the confidence interval, and 14 genes related to auxin asymmetric redistribution and root developmental process were predicted to be candidate genes. The identification and functional analyses of these genes affecting LPRA are of benefit to the cultivar selection with optimal root system architecture (RSA) under P deficiency in Brassica napus

Genetic variants associated with the root system architecture of oilseed rape (Brassica napus L.) under contrasting phosphate supply

Breeding crops with ideal root system architecture for efficient absorption of phosphorus is an important strategy to reduce the use of phosphate fertilizers. To investigate genetic variants leading to changes in root system architecture, 405 oilseed rape cultivars were genotyped with a 60K Brassica Infinium SNP array in low and high P environments. A total of 285 single-nucleotide polymorphisms were associated with root system architecture traits at varying phosphorus levels. Nine single-nucleotide polymorphisms corroborate a previous linkage analysis of root system architecture quantitative trait loci in the BnaTNDH population. One peak single-nucleotide polymorphism region on A3 was associated with all root system architecture traits and co-localized with a quantitative trait locus for primary root length at low phosphorus. Two more single-nucleotide polymorphism peaks on A5 for root dry weight at low phosphorus were detected in both growth systems and co-localized with a quantitative trait locus for the same trait. The candidate genes identified on A3 form a haplotype ‘BnA3Hap’, that will be important for understanding the phosphorus/root system interaction and for the incorporation into Brassica napus breeding programs

Plasma lipid profiles and homocysteine levels in anti-N-methyl-D-aspartate receptor encephalitis

IntroductionWe aimed to investigate whether lipid profiles and homocysteine levels in patients with anti-N-methyl-D-aspartate receptor encephalitis are related to clinical presentation and prognosis, which may contribute to further research on the pathogenesis and treatment of this disease.MethodsThis study included a total of 43 patients with anti-N-methyl-D-aspartate receptor encephalitis and 43 sex–age-matched healthy controls. Baseline demography, clinical data, patient outcomes, and ancillary examination results were recorded. Patients were followed up every 2–3 months during the first year. The modified Rankin Scale score was used to evaluate the therapeutic effect and clinical outcome.ResultsAmong the 43 patients included in this study, 55.81% were male, the mean age of onset was 27 years old, and the median modified Rankin Scale score on admission was 3.0. Apolipoprotein A-1 was significantly lower in patients with anti-N-methyl-D-aspartate receptor encephalitis compared with healthy controls (p = 0.004). Compared with healthy controls, homocysteine (p = 0.002), apolipoprotein B (p = 0.004), Lpa (p = 0.045), and apolipoprotein B/apolipoprotein A-1 (p = 0.001) were significantly increased in patients with anti-N-methyl-D-aspartate receptor encephalitis. According to the modified Rankin Scale scores, 6 months after discharge, 72.09% of patients had a good prognosis and 27.91% had a poor prognosis. In the good prognosis group, age (p = 0.031), lipoprotein a (p = 0.023), apolipoprotein A-1 (p = 0.027) at baseline, and the modified Rankin Scale score on admission (p = 0.019) were significantly higher than those in the poor prognosis group.ConclusionThis study suggests the possibility that serum lipid profile and homocysteine play an important role in the pathogenesis of anti-N-methyl-D-aspartate receptor encephalitis, providing support for lipid-lowering treatment of anti-N-methyl-D-aspartate receptor encephalitis patients

Identification of QTLs for relative root traits associated with phosphorus efficiency in two culture systems in Brassica napus

Modifications of root system morphology and architecture are considered important strategies of plant tolerance to phosphorus (P) deficiency. However, the effect of culture system on the responses of root traits to P deficiency is not well documented. In this study, the responses of root traits to P deficiency were recorded in a Brassica napus double haploid (DH) population consisting of 182 lines derived from a cross between cultivar ‘Tapidor’ and ‘Ningyou 7’ using an ‘agar’ system and a ‘pouch and wick’ system. Under P deficient conditions, more DH lines had greater total root length, primary root length, total lateral root length, mean lateral root length and less lateral root density in the ‘pouch and wick’ system than the ‘agar’ system. Ten and two quantitative trait loci (QTLs) were detected for the relative root traits in the ‘agar’ system and the ‘pouch and wick’ system, respectively. The QTL for the same trait in the ‘agar’ system did not overlap with that in the ‘pouch and wick’ system. Two and one QTL clusters identified in the ‘agar’ system were located on chromosome A09 (Cluster1 and Cluster2) and C04 (Cluster3), respectively. RLRN_A04b, RSDW_A09a and Cluster1 were found to affect the seed yield and/or yield-related traits in two field trials. Overall, this study demonstrated a significant impact of different culture systems on the responses of root traits to P deficiency and on the detection of QTLs for the relative root traits, and identified three major QTLs that could be employed for marker assisted selection of P efficient cultivars

Model Test of Micro-Pile Group Reinforcing High Steep Landslide

High steep landslides are a major concern for infrastructure construction in the mountainous areas of Western China. The micro-pile technique has been gradually used to prevent landslides, due to convenient construction and good performance. However, the application of the micro-pile technique on landslide prevention was generally implemented on the front edge of landslides, which is not applicable for the high steep landslides due to the limited operation space. In this study, a large-scale model test on the performance of a micro steep pile group on the prevention of high steep landsides was conducted in order to implement the micro-pile on the top of landslides. The force-deformation characteristics and failure modes of the steel pipe micro-pile group reinforcing high steep landslides were investigated. The test results showed that the landslide thrusts acting on the micro-pile group showed a triangle distribution. The maximum soil earth pressure was observed near the slip surface during landsides. The resistance of the micro pole group was distributed in an inverted triangle, mainly in the upper half of the loaded section. The sliding bed resistance is unevenly distributed along the height direction, and is larger near the slip surface. Once the landslide occurred, the force distribution of each row of steel pipe micro-piles was basically the same. The bending moment of the loaded section of the steel pipe micro-pile was mostly negative, with a larger bending moment in the range of eight times the pile diameter above the slip surface. The largest bending moment value is located at two times the pile diameter on the slip surface. On the other hand, the bending moment of the embedded section of the steel pipe micro-pile is mostly positive, showing a tension state with a maximum value at four times the pile diameter under the slip surface. This implies that the role of loaded and embedded sections of the micro-pile group on the landsides is different. The failure mode of the micro-pile group was mainly attributable to the bending failure within eight times the pile diameter above and below the slip surface

Preface

International audienc

How do roots elongate in a structured soil?

In this review, we examine how roots penetrate a structured soil. We first examine the relationship between soil water status and its mechanical strength, as well as the ability of the soil to supply water to the root. We identify these as critical soil factors, because it is primarily in drying soil that mechanical constraints limit root elongation. Water supply to the root is important because root water status affects growth pressures and root stiffness. To simplify the bewildering complexity of soilroot interactions, the discussion is focused around the special cases of root elongation in soil with pores much smaller than the root diameter and the penetration of roots at interfaces within the soil. While it is often assumed that the former case is well understood, many unanswered questions remain. While low soilroot friction is often viewed as a trait conferring better penetration of strong soils, it may also increase the axial pressure on the root tip and in so doing reduce the rate of cell division and/or expansion. The precise trade-off between various root traits involved in root elongation in homogeneous soil remains to be determined. There is consensus that the most important factors determining root penetration at an interface are the angle at which the root attempts to penetrate the soil, root stiffness, and the strength of the soil to be penetrated. The effect of growth angle on root penetration implicates gravitropic responses in improved root penetration ability. Although there is no work that has explored the effect of the strength of the gravitropic responses on penetration of hard layers, we attempt to outline possible interactions. Impacts of soil drying and strength on phytohormone concentrations in roots, and consequent root-to-shoot signalling, are also considered

Rhizosphere bacteria containing ACC deaminase decrease root ethylene emission and improve maize root growth with localized nutrient supply

Localized nutrient supply can enhance maize root proliferation, but also increase root ethylene production. Whether engineering ethylene signalling in the rhizosphere can further enhance root growth and nutrient uptake remains unknown. Here, field and column experiments for maize (Zea mays. L) were designed as different nutrient treatments (broadcast or localized nutrient supply containing ammonium and phosphorus) with or without inoculation with rhizobacterium Variovorax paradoxus 5C-2 containing the 1-aminocyclopropane-1-carboxylate (ACC) deaminase. Rhizobacterial inoculation increased shoot biomass by 12% and root length density by 50% with localized nutrient supply. Meanwhile, localized nutrient supply increased root ethylene production by 54% compared with broadcast, and rhizobacterial inoculation prevented the increase in root ethylene. Reduced root ethylene production following V. paradoxus 5C-2 inoculation was highly associated with a greater proportion of fine root proliferation under localized nutrient supply, which may account for the increased nitrogen and phosphorus uptake. Our work sheds light on the understanding of the interactions between root and microbe through taking hormone into consideration to dissect the relationship between below ground and above ground. It is useful to explore the strategy of soil–crop management by introducing rhizosphere microorganisms to regulate plant ethylene signal and then benefit sustainable agriculture

Wheat root growth responses to horizontal stratification of fertiliser in a water-limited environment

Background and aims: We were interested to determine the effects of horizontal stratification of nutrient-rich zones within different layers of the soil profile in water-limited environments on root growth and crop yield. This is practically relevant to large areas of China, many of which have been over-fertilized. Methods: We used soil-filled rhizotrons 1.4 m deep to grow wheat. Three different nutrient-rich horizontal stratifications were used at depths of 0–40, 60–100 and 0–140 cm. The soil was packed to a density of 1.5 g cm−3, at a matric potential of −10 kPa. The wheat was grown until it was at terminal drought. Low soil hydraulic conductance preserved the horizontal nutrient stratification. Results: Plants grown in rhizotrons with a surface layer (0–40 cm) of nutrients had the greatest root growth, water uptake and yield. When nutrients were uniformly distributed throughout the rhizotron (0–140 cm), root growth was restricted to the surface layer. Measurements of soil moisture indicate this was because the roots became impeded. Conclusions: Nutrient enrichment of the surface layer was the most effective at promoting deep roots, higher water uptake and yield under water-limited conditions. Heterogeneous nutrient distribution can modify root growth and water uptake