1,881 research outputs found
GiMMiK - Generating Bespoke Matrix Multiplication Kernels for Accelerators: Application to High-Order Computational Fluid Dynamics
Neuromuscular, endocrine, and perceptual fatigue responses during different length between-match microcycles in professional rugby league players
The purpose of this study was to examine the changes in neuromuscular, perceptual and hormonal measures following professional rugby league matches during different length between-match microcycles. Methods: Twelve professional rugby league players from the same team were assessed for changes in countermovement jump (CMJ) performance (flight time and relative power), perceptual responses (fatigue, well-being and muscle soreness) and salivary hormone (testosterone [T] and cortisol [C]) levels during 5, 7 and 9 d between-match training microcycles. All training was prescribed by the club coaches and was monitored using the session-RPE method. Results: Lower mean daily training load was completed on the 5 d compared with the 7 and 9 d microcycles. CMJ flight time and relative power, perception of fatigue, overall well-being and muscle soreness were significantly reduced in the 48 h following the match in each microcycle (P < .05). Most CMJ variables returned to near baseline values following 4 d in each microcycle. Countermovement jump relative power was lower in the 7 d microcycle in comparison with the 9 d microcycle (P < .05). There was increased fatigue at 48 h in the 7 and 9 d microcycles (P < .05) but had returned to baseline in the 5 d microcycle. Salivary T and C did not change in response to the match. Discussion: Neuromuscular performance and perception of fatigue are reduced for at least 48 h following a rugby league match but can be recovered to baseline levels within 4 d. These findings show that with appropriate training, it is possible to recover neuromuscular and perceptual measures within 4 d after a rugby league match. © Human Kinetics, Inc
Bayesian astrostatistics: a backward look to the future
This perspective chapter briefly surveys: (1) past growth in the use of
Bayesian methods in astrophysics; (2) current misconceptions about both
frequentist and Bayesian statistical inference that hinder wider adoption of
Bayesian methods by astronomers; and (3) multilevel (hierarchical) Bayesian
modeling as a major future direction for research in Bayesian astrostatistics,
exemplified in part by presentations at the first ISI invited session on
astrostatistics, commemorated in this volume. It closes with an intentionally
provocative recommendation for astronomical survey data reporting, motivated by
the multilevel Bayesian perspective on modeling cosmic populations: that
astronomers cease producing catalogs of estimated fluxes and other source
properties from surveys. Instead, summaries of likelihood functions (or
marginal likelihood functions) for source properties should be reported (not
posterior probability density functions), including nontrivial summaries (not
simply upper limits) for candidate objects that do not pass traditional
detection thresholds.Comment: 27 pp, 4 figures. A lightly revised version of a chapter in
"Astrostatistical Challenges for the New Astronomy" (Joseph M. Hilbe, ed.,
Springer, New York, forthcoming in 2012), the inaugural volume for the
Springer Series in Astrostatistics. Version 2 has minor clarifications and an
additional referenc
Medicines management at home during the COVID-19 pandemic: a qualitative study exploring the UK patient/carer perspective
OBJECTIVES: To explore home medicine practices and safety for people shielding and/or over the age of 70 during the COVID-19 pandemic and to create guidance, from the patient/carer perspective, for enabling safe medicine practices for this population. METHODS: Semi-structured interviews were carried out with 50 UK participants who were shielding and/or over the age of 70 and who used medicines for a long-term condition, using telephone or video conferencing. Participants were recruited through personal/professional networks and through patient/carer organisations. Participants were asked about their experiences of managing medicines during the pandemic and how this differed from previous practices. Data were analysed using inductive thematic analysis. KEY FINDINGS: Patients' and their families' experiences of managing medicines safely during the pandemic varied greatly. Analysis suggests that this was based on the patient's own agency, the functioning of their medicines system pre-pandemic and their relationships with family, friends, community networks and pharmacy staff. Medicine safety issues reported included omitted doses and less-effective formulations being used. Participants also described experiencing high levels of anxiety related to obtaining medicines, monitoring medicines and feeling at risk of contracting COVID-19 while accessing healthcare services for medicine-related issues. Effects of the pandemic on medicines adherence were reported to be positive by some and negative by others. CONCLUSIONS: Pharmacy staff have a key role to play by establishing good relationships with patients and their families, working with prescribers to ensure medicines systems are as joined up as possible, and signposting to community networks that can help with medicines collection
Functional limit theorems for random regular graphs
Consider d uniformly random permutation matrices on n labels. Consider the
sum of these matrices along with their transposes. The total can be interpreted
as the adjacency matrix of a random regular graph of degree 2d on n vertices.
We consider limit theorems for various combinatorial and analytical properties
of this graph (or the matrix) as n grows to infinity, either when d is kept
fixed or grows slowly with n. In a suitable weak convergence framework, we
prove that the (finite but growing in length) sequences of the number of short
cycles and of cyclically non-backtracking walks converge to distributional
limits. We estimate the total variation distance from the limit using Stein's
method. As an application of these results we derive limits of linear
functionals of the eigenvalues of the adjacency matrix. A key step in this
latter derivation is an extension of the Kahn-Szemer\'edi argument for
estimating the second largest eigenvalue for all values of d and n.Comment: Added Remark 27. 39 pages. To appear in Probability Theory and
Related Field
MicroRNA Controlled Adenovirus Mediates Anti-Cancer Efficacy without Affecting Endogenous MicroRNA Activity
MicroRNAs are small non-coding RNA molecules that regulate mRNA translation and stability by binding to complementary sequences usually within the 3′ un-translated region (UTR). We have previously shown that the hepatic toxicity caused by wild-type Adenovirus 5 (Ad5WT) in mice can be prevented by incorporating 4 binding sites for the liver-specific microRNA, mir122, into the 3′ UTR of E1A mRNA. This virus, termed Ad5mir122, is a promising virotherapy candidate and causes no obvious liver pathology. Herein we show that Ad5mir122 maintains wild-type lytic activity in cancer cells not expressing mir122 and assess any effects of possible mir122 depletion in host cells. Repeat administration of 2×1010 viral particles of Admir122 to HepG2 tumour bearing mice showed significant anti-cancer efficacy. RT-QPCR showed that E1A mRNA was down-regulated 29-fold in liver when compared to Ad5WT. Western blot for E1A confirmed that all protein variants were knocked down. RT-QPCR for mature mir122 in infected livers showed that quantity of mir122 remained unaffected. Genome wide mRNA microarray profiling of infected livers showed that although the transcript level of >3900 different mRNAs changed more than 2-fold following Ad5WT infection, less than 600 were changed by Ad5mir122. These were then filtered to select mRNAs that were only altered by Ad5mir122 and the remaining 21 mRNAs were compared to predicted mir122 targets. No mir122 target mRNAs were affected by Ad5 mir122. These results demonstrate that the exploitation of microRNA regulation to control virus replication does not necessarily affect the level of the microRNA or the endogenous mRNA targets
Morphological features in a Xhosa schizophrenia population
BACKGROUND: Demonstrating an association between physical malformation and schizophrenia could be considered supportive of a neurodevelopmental origin of schizophrenia and may offer insights into a critical period for the development of this illness. The aim of our study was to investigate whether differences in the presence of minor physical anomalies could be demonstrated between schizophrenia sufferers and normal controls in a Xhosa population with a view to identifying a means of subtyping schizophrenia for use in future genetic studies. METHODS: Sixty-three subjects with schizophrenia (21 sibling pairs, 1 sibship of four and a group of probands with an affected non-participating sibling (n = 17)), 81 normal controls (37 singletons and 22 sibling pairs) of Xhosa ethnicity were recruited. Each participant was then examined for minor physical anomalies using the Modified Waldrop scale. The relationship between each of the morphological features and the presence of an affected sib was examined using the Chi-squared test, followed by an intra-pair concordance analysis in the sibling pairs. RESULTS: Gap between first and second toes was significantly more common in the affected sib pair group when compared to the non-affected sib pair group (p = 0.019) and non-affected singleton control group (p = 0.013). Concordance analysis also revealed increased concordance for this item in the affected sib pair group. CONCLUSION: These findings offer an intriguing possibility that in the Xhosa population, affected sib pair status may be linked to a neurodevelopmental insult during a specific period of the fetal developmental
From empowering the shameful to shaming the empowered: Shifting depictions of the poor in 'reality TV'
Use of Tissue-Specific MicroRNA to Control Pathology of Wild-Type Adenovirus without Attenuation of Its Ability to Kill Cancer Cells
Replicating viruses have broad applications in biomedicine, notably in cancer virotherapy and in the design of attenuated vaccines; however, uncontrolled virus replication in vulnerable tissues can give pathology and often restricts the use of potent strains. Increased knowledge of tissue-selective microRNA expression now affords the possibility of engineering replicating viruses that are attenuated at the RNA level in sites of potential pathology, but retain wild-type replication activity at sites not expressing the relevant microRNA. To assess the usefulness of this approach for the DNA virus adenovirus, we have engineered a hepatocyte-safe wild-type adenovirus 5 (Ad5), which normally mediates significant toxicity and is potentially lethal in mice. To do this, we have included binding sites for hepatocyte-selective microRNA mir-122 within the 39 UTR of the E1A transcription cassette. Imaging versions of these viruses, produced by fusing E1A with luciferase, showed that inclusion of mir-122 binding sites caused up to 80-fold decreased hepatic expression of E1A following intravenous delivery to mice. Animals administered a ten-times lethal dose of wild-type Ad5 (5610 10 viral particles/mouse) showed substantial hepatic genome replication and extensive liver pathology, while inclusion of 4 microRNA binding sites decreased replication 50-fold and virtually abrogated liver toxicity. This modified wild-type virus retained full activity within cancer cells and provided a potent, liver-safe oncolytic virus. In addition to providing many potent new viruses for cancer virotherapy, microRNA control of virus replication should provide a new strategy for designing safe attenuated vaccines applied across a broad range of viral disease
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