Fluid and gas fluxes from the Logatchev hydrothermal vent area

The Logatchev hydrothermal field at 14°45′N on the MAR is characterized by gas plumes that are enriched in methane and helium compared to the oceanic background. We investigated CH4 concentration and δ13C together with δ3He in the water column of that region. These data and turbidity measurements indicate that apart from the known vent fields, another vent site exists northeast of the vent field Logatchev 1. The distribution of methane and 3He concentrations along two sections were used in combination with current measurements from lowered acoustic Doppler current profilers (LADCP) to calculate the horizontal plume fluxes of these gases. According to these examinations 0.02 μmol s−1 of 3He and 0.21 mol s−1 of methane are transported in a plume that flows into a southward direction in the central part of the valley. Based on 3He measurements of vent fluid (22 ± 6 pM), we estimate a total vent flux in this region of about 900 L s−1 and a total flux of CH4 of 3.2 mol s−1

The metabolomic detection of lung cancer biomarkers in sputum

Developing screening and diagnosis methodologies based on novel biomarkers should allow for the detection of the lung cancer (LC) and possibly at an earlier stage and thereby increase the effectiveness of clinical interventions. Here, our primary objective was to evaluate the potential of spontaneous sputum as a source of non-invasive metabolomic biomarkers for LC status.Spontaneous sputum was collected and processed from 34 patients with suspected LC, alongside 33 healthy controls. Of the 34 patients, 23 were subsequently diagnosed with LC (LC(+), 16 NSCLC, six SCLC, and one radiological diagnosis), at various stages of disease progression. The 67 samples were analysed using flow infusion electrospray ion mass spectrometry (FIE-MS) and gas-chromatography mass spectrometry (GC-MS).Principal component analysis identified negative mode FIE-MS as having the main separating power between samples from healthy and LC. Discriminatory metabolites were identified using ANOVA and Random Forest. Indications of potential diagnostic accuracy involved the use of receiver operating characteristic/area under the curve (ROC/AUC) analyses. This approach identified metabolites changes that were only observed with LC. Metabolites with AUC values of greater than 0.8 which distinguished between LC(+)/LC(-) binary classifications where identified and included Ganglioside GM1 which has previously been linked to LC.This study indicates that metabolomics based on sputum can yield metabolites that can be used as a diagnostic and/or discriminator tool. These could aid clinical intervention and targeted diagnosis of LC within an at risk LC(-) population group. The use of sputum as a non-invasive source of metabolite biomarkers may aid in the development of an at-risk population screening programme for lung cancer or enhanced clinical diagnostic pathways

Flux and dispersion of gases from the "Drachenschlund" hydrothermal vent at 8°18' S, 13°30'W on the Mid-Atlantic Ridge

Hydrothermal emission of mantle helium appears to be directly related to magma production rate, but other processes can generate methane and hydrogen on mid-ocean ridges. In an on-going effort to characterize these processes in the South Atlantic, the flux and distribution of these gases were investigated in the vicinity of a powerful black smoker recently discovered at 8°17.9' S, 13°30.4' W. The vent lies on the shoulder of an oblique offset in the Mid-Atlantic Ridge and discharges high concentrations of methane and hydrogen. Measurements during expeditions in 2004 and 2006 show that the ratio of CH4 to 3He in the neutrally buoyant plume is quite high, 4 × 108. The CTD stations were accompanied by velocity measurements with lowered acoustic Doppler current profilers (LADCP), and from these data we estimate the methane transport to have been 0.5 mol s− 1 in a WSW-trending plume that seems to develop during the ebb tidal phase. This transport is an order of magnitude greater than the source of CH4 calculated from its concentration in the vent fluid and the rise height of the plume. From this range of methane fluxes, the source of 3He is estimated to be between 0.14 and 1.2 nmol s− 1. In either case, the 3He source is significantly lower than expected from the spreading rate of the Mid-Atlantic Ridge. From the inventory of methane in the rift valley adjacent to the vent, it appears that the average specific rate of oxidation is 2.6 to 23 yr− 1, corresponding to a turnover time between 140 and 16 days. Vertical profiles of methane in the surrounding region often exhibited Gaussian-like distributions, and the variances appear to increase with distance from the vent. Using a Gaussian plume model, we obtained a range of vertical eddy diffusivities between 0.009 and 0.08 m2m2 s− 1. These high values may be due to tidally driven internal waves across the promontory on which the vent is located

Isotope fractionation and mixing in methane plumes from the Logatchev hydrothermal field

As methane is consumed in the deep sea, its 13C/12C ratio progressively increases because of kinetic isotope fractionation. Many submarine hydrothermal vents emit methane with carbon isotope ratios that are higher than those of background methane in the surrounding ocean. Since the latter exists at low concentrations, mixing of background methane with vent fluid tends to decrease the 13C/12C ratio as concentration decreases, opposite to the trend produced by consumption. We investigated CH4 concentration and δ13C together with δ3He in plumes from the Logatchev hydrothermal field (LHF) located at 14°45′N, 45°W, which generates relatively heavy methane (δ13C ≈ −13‰) by serpentinization of ultramafic rock. The measured methane and δ3He were well correlated at high concentrations, indicating a CH4/3He ratio of 1 × 108 in the vent fluids. These tracer distributions were also simulated with an advection-diffusion model in which methane consumption only occurs above a certain threshold concentration. We utilized δ3He to calculate the methane remaining in solution after oxidation, f, and the deviation of δ13C from the value expected from mixing alone, Δδ13C. Both in the model and in the data, the entire set of Δδ13C values are not correlated with log f, which is due to continuous oxidation within the plume while mixing with background seawater. A linear relationship, however, is found in the model for methane at concentrations sufficiently above background, and many of the samples with elevated CH4 north of LHF exhibit a linear trend of Δδ13C versus log f as well. From this trend, the kinetic isotope fractionation factor in the LHF plumes appears to be about 1.015. This value is somewhat higher than found in some other deep-sea studies, but it is lower than found in laboratory incubation experiments

Evaluation of FTIR Spectroscopy as a diagnostic tool for lung cancer using sputum

BACKGROUND: Survival time for lung cancer is poor with over 90% of patients dying within five years of diagnosis primarily due to detection at late stage. The main objective of this study was to evaluate Fourier transform infrared spectroscopy (FTIR) as a high throughput and cost effective method for identifying biochemical changes in sputum as biomarkers for detection of lung cancer. METHODS: Sputum was collected from 25 lung cancer patients in the Medlung observational study and 25 healthy controls. FTIR spectra were generated from sputum cell pellets using infrared wavenumbers within the 1800 to 950 cm(-1 )"fingerprint" region. RESULTS: A panel of 92 infrared wavenumbers had absorbances significantly different between cancer and normal sputum spectra and were associated with putative changes in protein, nucleic acid and glycogen levels in tumours. Five prominent significant wavenumbers at 964 cm(-1), 1024 cm(-1), 1411 cm(-1), 1577 cm(-1 )and 1656 cm(-1 )separated cancer spectra from normal spectra into two distinct groups using multivariate analysis (group 1: 100% cancer cases; group 2: 92% normal cases). Principal components analysis revealed that these wavenumbers were also able to distinguish lung cancer patients who had previously been diagnosed with breast cancer. No patterns of spectra groupings were associated with inflammation or other diseases of the airways. CONCLUSIONS: Our results suggest that FTIR applied to sputum might have high sensitivity and specificity in diagnosing lung cancer with potential as a non-invasive, cost-effective and high-throughput method for screening. TRIAL REGISTRATION: ClinicalTrials.gov: NCT0089926

The d13C anomaly in the northeastern Atlantic

The δ13C of dissolved inorganic carbon was measured on samples collected at 49°N in the northeast Atlantic in January 1994. Deeper than 2000 m, δ13C exhibits the same negative correlation versus dissolved phosphate that is observed elsewhere in the deep Atlantic. Upward from 2000 m to about 600 m, δ13C shifts to values more negative than expected from the correlation with nutrients at depth, which is likely due to penetration of anthropogenic CO2. From these data, the profile of the anthropogenic δ13C decrease is calculated by using either dissolved phosphate or apparent oxygen utilization as a proxy for the preanthropogenic δ13C distribution. The shape of the anthropogenic anomaly profile derived from phosphate is similar to that of the increase in dissolved inorganic carbon derived by others in the same area. The reconstruction from oxygen utilization results in a lower estimate of the anthropogenic δ13C decrease in the upper water column, and the vertical anomaly profile is less similar to that of the dissolved inorganic carbon increase. A 13C budget for the atmosphere, ocean, and terrestrial biosphere indicates that within the range of probable ocean CO2 uptake the ratio of δ13C to inorganic carbon change should be mostly influenced by the 13C inventory change of the biosphere. However, the uncertainty in the ratio we derive prevents a strong contraint on the size of the exchangeable biosphere

Methane in the northern Atlantic controlled by microbial oxidation and atmospheric history

During May - August, 1997, the distributions of dissolved methane and CCl3F (CFC11) were measured in the Atlantic between 50° and 60°N. In surface waters throughout the region, methane was observed to be close to equilibrium with the atmospheric mixing ratio, implying that surface ocean methane is tracking its atmospheric history in regions of North Atlantic Deep Water formation. Despite the different atmospheric history and ocean chemistry of CH4 and CFC11, their spatial distribution patterns in the water column are remarkably similar. One-dimensional distributions have been simulated with an advection-diffusion model forced by the atmospheric histories. The results suggest that the similar patterns result from the increasing input of CH4 and CFC11 to newly formed deep waters over time, combined with the effect of horizontal mixing and the oxidation of methane on a 50 year time scale