34 research outputs found

    Improvement of Phylogenetic Method to Analyze Compositional Heterogeneity

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    Background: Phylogenetic analysis is a key way to understand current research in the biological processes and detect theory in evolution of natural selection. The evolutionary relationship between species is generally reflected in the form of phylogenetic trees. Many methods for constructing phylogenetic trees, are based on the optimization criteria. We extract the biological data via modeling features, and then compare these characteristics to study the biological evolution between species. Results: Here, we use maximum likelihood and Bayesian inference method to establish phylogenetic trees; multi-chain Markov chain Monte Carlo sampling method can be used to select optimal phylogenetic tree, resolving local optimum problem. The correlation model of phylogenetic analysis assumes that phylogenetic trees are built on homogeneous data, however there exists a large deviation in the presence of heterogeneous data. We use conscious detection to solve compositional heterogeneity. Our method is evaluated on two sets of experimental data, a group of bacterial 16S ribosomal RNA gene data, and a group of genetic data with five homologous species. Conclusions: Our method can obtain accurate phylogenetic trees on the homologous data, and also detect the compositional heterogeneity of experimental data. We provide an efficient method to enhance the accuracy of generated phylogenetic tre

    Solar-Driven H_2O_2 Generation From H_2O and O_2 Using Earth-Abundant Mixed-Metal Oxide@Carbon Nitride Photocatalysts

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    Light-driven generation of H_2O_2 only from water and molecular oxygen could be an ideal pathway for clean production of solar fuels. In this work, a mixed metal oxide/graphitic-C_3N_4 (MMO@C_3N_4) composite was synthesized as a dual-functional photocatalyst for both water oxidation and oxygen reduction to generate H_2O_2. The MMO was derived from a NiFe-layered double hydroxide (LDH) precursor for obtaining a high dispersion of metal oxides on the surface of the C_3N_4 matrix. The C_3N_4 is in the graphitic phase and the main crystalline phase in MMO is cubic NiO. The XPS analyses revealed the doping of Fe^(3+) in the dominant NiO phase and the existence of surface defects in the C3N4 matrix. The formation and decomposition kinetics of H_2O_2 on the MMO@C_3N_4 and the control samples, including bare MMO, C_3N_4 matrix, Ni- or Fe-loaded C_3N_4 and a simple mixture of MMO and C_3N_4, were investigated. The MMO@C_3N_4 composite produced 63 μmol L^(−1) of H_2O_2 in 90 min in acidic solution (pH 3) and exhibited a significantly higher rate of production for H_2O_2 relative to the control samples. The positive shift of the valence band in the composite and the enhanced water oxidation catalysis by incorporating the MMO improved the light-induced hole collection relative to the bare C_3N_4 and resulted in the enhanced H_2O_2 formation. The positively shifted conduction band in the composite also improved the selectivity of the two-electron reduction of molecular oxygen to H_2O_2

    The effect of 5 cycles of biparental mass selection on a narrow base maize population based on phenotype, combining ability, and SSR analyses

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    Five cycles of biparental mass selection (MS) were carried out to improve the narrow-base maize population P4C0. In different ecological environments, the phenotypes of the developed populations were analyzed, the combining abilities were tested according to an incomplete diallel model to study the effects of selection, and the effects of MS on genetic diversity of the populations were also analyzed by using 51 pairs of SSR markers. It was found that MS was effective in improving the main traits and general combing ability (GCA), and it was effective on maintain¬ing the genetic diversity of the population. At the same time, the genetic structure was changed with advance of selection
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