IN VITRO ANTIBACTERIAL AND ANTIFUNGAL ACTIVITIES OF AQUEOUS AND ETHANOLIC LEAF EXTRACTS OF ACACIA AURICULIFORMIS

Objective: The present study focuses on in vitro antimicrobial properties of aqueous and ethanol leaf extract of Acacia auriculiformis tested on Gram-positive cocci, Gram-negative bacilli, multidrug-resistant (MDR) Gram-negative bacilli, and fungus.Methods: Ethanol and aqueous extracts of the leaves of A. auriculiformis were prepared. Agar well diffusion was the method for antimicrobial susceptibility. Freshly grown standard strains of Staphylococcus aureus, Enterococcus faecalis, Klebsiella pneumoniae (K. pneumoniae) , Escherchia coli (E.coli) and Pseudomonas aeruginosa, clinical strains of Streptococcus pneumoniae, Candida albicans (C. ailbicans), and MDR E. coli, and MDR Klebsiella pnuemoniae were used. Ampicillin disc (10 μg) was used as control.Results: The zone of inhibition was measured to determine the antimicrobial activity. Ethanolic extract of A. auriculiformis exhibited antibacterial activity against all the strains including MDR strains of K. pneumoniae and E. coli. Antifungal activity was exhibited by both aqueous and ethanol leaf extracts of A. auriculiformis.Conclusion: Ethanol extract could be used against MDR K. pneumoniae and MDR E. coli. Similarly, aqueous and ethanol extract can be the drug of choice for C. albicans infection. Further study is necessary to evaluate the accurate compound responsible for antibacterial and antifungal activity for pharmaceutical applications

Silencing Early Viral Replication in Macrophages and Dendritic Cells Effectively Suppresses Flavivirus Encephalitis

West Nile (WN) and St. Louis encephalitis (SLE) viruses can cause fatal neurological infection and currently there is neither a specific treatment nor an approved vaccine for these infections. In our earlier studies, we have reported that siRNAs can be developed as broad-spectrum antivirals for the treatment of infection caused by related viruses and that a small peptide called RVG-9R can deliver siRNA to neuronal cells as well as macrophages. To increase the repertoire of broad-spectrum antiflaviviral siRNAs, we screened 25 siRNAs targeting conserved regions in the viral genome. Five siRNAs were found to inhibit both WNV and SLE replication in vitro reflecting broad-spectrum antiviral activity and one of these was also validated in vivo. In addition, we also show that RVG-9R delivers siRNA to macrophages and dendritic cells, resulting in effective suppression of virus replication. Mice were challenged intraperitoneally (i.p.) with West Nile virus (WNV) and treated i.v. with siRNA/peptide complex. The peritoneal macrophages isolated on day 3 post infection were isolated and transferred to new hosts. Mice receiving macrophages from the anti-viral siRNA treated mice failed to develop any disease while the control mice transferred with irrelevant siRNA treated mice all died of encephalitis. These studies suggest that early suppression of viral replication in macrophages and dendritic cells by RVG-9R-mediated siRNA delivery is key to preventing the development of a fatal neurological disease

Fire detection from social media images by means of instance-based learning

Social media can provide valuable information to support decision making in crisis management, such as in accidents, explosions, and fires. However, much of the data from social media are images, which are uploaded at a rate that makes it impossible for human beings to analyze them. To cope with that problem, we design and implement a database-driven architecture for fast and accurate fire detection named FFireDt. The design of FFireDt uses the instance-based learning through indexed similarity queries expressed as an extension of the relational Structured Query Language. Our contributions are: (i) the design of the Fast-Fire Detection (FFireDt), which achieves efficiency and efficacy rates that rival to the state-of-the-art techniques; (ii) the sound evaluation of 36 image descriptors, for the task of image classification in social media; (iii) the evaluation of content-based indexing with respect to the construction of instance-based classification systems; and (iv) the curation of a ground-truth annotated dataset of fire images from social media. Using real data from Flickr, the experiments showed that system FFireDt was able to achieve a precision for fire detection comparable to that of human annotators. Our results are promising for the engineering of systems to monitor images uploaded to social media services.FAPESPCNPqCAPESSTIC-AmSudRESCUER project, funded by the European Commission (Grant: 614154) and by the CNPq/MCTI (Grant: 490084/2013-3)International Conference on Enterprise Information Systems - ICEIS (17. 2015 Barcelona

Fire detection from social media images by means of instance-based learning

Social media can provide valuable information to support decision making in crisis management, such as in accidents, explosions, and fires. However, much of the data from social media are images, which are uploaded at a rate that makes it impossible for human beings to analyze them. To cope with that problem, we design and implement a database-driven architecture for fast and accurate fire detection named FFireDt. The design of FFireDt uses the instance-based learning through indexed similarity queries expressed as an extension of the relational Structured Query Language. Our contributions are: (i) the design of the Fast-Fire Detection (FFireDt), which achieves efficiency and efficacy rates that rival to the state-of-the-art techniques; (ii) the sound evaluation of 36 image descriptors, for the task of image classification in social media; (iii) the evaluation of content-based indexing with respect to the construction of instance-based classification systems; and (iv) the curation of a ground-truth annotated dataset of fire images from social media. Using real data from Flickr, the experiments showed that system FFireDt was able to achieve a precision for fire detection comparable to that of human annotators. Our results are promising for the engineering of systems to monitor images uploaded to social media services.FAPESPCNPqCAPESSTIC-AmSudRESCUER project, funded by the European Commission (Grant: 614154) and by the CNPq/MCTI (Grant: 490084/2013-3)International Conference on Enterprise Information Systems - ICEIS (17. 2015 Barcelona

Sexual Transmission of a Plant Pathogenic Bacterium, Candidatus Liberibacter asiaticus, between Conspecific Insect Vectors during Mating

Candidatus Liberibacter asiaticus is a fastidious, phloem-inhabiting, gram-negative bacterium transmitted by Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Psyllidae). The bacterium is the presumed causal agent of huanglongbing (HLB), one of the most destructive and economically important diseases of citrus. We investigated whether Las is transmitted between infected and uninfected D. citri adults during courtship. Our results indicate that Las was sexually transmitted from Las-infected male D. citri to uninfected females at a low rate (<4%) during mating. Sexual transmission was not observed following mating of infected females and uninfected males or among adult pairs of the same sex. Las was detected in genitalia of both sexes and also in eggs of infected females. A latent period of 7 days or more was required to detect the bacterium in recipient females. Rod shaped as well as spherical structures resembling Las were observed in ovaries of Las-infected females with transmission electron microscopy, but were absent in ovaries from uninfected D. citri females. The size of the rod shaped structures varied from 0.39 to 0.67 µm in length and 0.19 to 0.39 µm in width. The spherical structures measured from 0.61 to 0.80 µm in diameter. This investigation provides convincing evidence that a plant pathogenic bacterium is sexually transmitted from male to female insects during courtship and established evidence that bacteria persist in reproductive organs. Moreover, these findings provide an alternative sexually horizontal mechanism for the spread of Las within populations of D. citri, even in the absence of infected host trees

Hippocampal CA3 Transcriptome Signature Correlates with Initial Precipitating Injury in Refractory Mesial Temporal Lobe Epilepsy

Background: Prolonged febrile seizures constitute an initial precipitating injury (IPI) commonly associated with refractory mesial temporal lobe epilepsy (RMTLE). in order to investigate IPI influence on the transcriptional phenotype underlying RMTLE we comparatively analyzed the transcriptomic signatures of CA3 explants surgically obtained from RMTLE patients with (FS) or without (NFS) febrile seizure history. Texture analyses on MRI images of dentate gyrus were conducted in a subset of surgically removed sclerotic hippocampi for identifying IPI-associated histo-radiological alterations.Methodology/Principal Findings: DNA microarray analysis revealed that CA3 global gene expression differed significantly between FS and NFS subgroups. An integrative functional genomics methodology was used for characterizing the relations between GO biological processes themes and constructing transcriptional interaction networks defining the FS and NFS transcriptomic signatures and its major gene-gene links (hubs). Co-expression network analysis showed that: i) CA3 transcriptomic profiles differ according to the IPI; ii) FS distinctive hubs are mostly linked to glutamatergic signalization while NFS hubs predominantly involve GABAergic pathways and neurotransmission modulation. Both networks have relevant hubs related to nervous system development, what is consistent with cell genesis activity in the hippocampus of RMTLE patients. Moreover, two candidate genes for therapeutic targeting came out from this analysis: SSTR1, a relevant common hub in febrile and afebrile transcriptomes, and CHRM3, due to its putative role in epilepsy susceptibility development. MRI texture analysis allowed an overall accuracy of 90% for pixels correctly classified as belonging to FS or NFS groups. Histological examination revealed that granule cell loss was significantly higher in FS hippocampi.Conclusions/Significance: CA3 transcriptional signatures and dentate gyrus morphology fairly correlate with IPI in RMTLE, indicating that FS-RMTLE represents a distinct phenotype. These findings may shed light on the molecular mechanisms underlying refractory epilepsy phenotypes and contribute to the discovery of novel specific drug targets for therapeutic interventions

A method of determining where to target surveillance efforts in heterogeneous epidemiological systems

The spread of pathogens into new environments poses a considerable threat to human, animal, and plant health, and by extension, human and animal wellbeing, ecosystem function, and agricultural productivity, worldwide. Early detection through effective surveillance is a key strategy to reduce the risk of their establishment. Whilst it is well established that statistical and economic considerations are of vital importance when planning surveillance efforts, it is also important to consider epidemiological characteristics of the pathogen in question—including heterogeneities within the epidemiological system itself. One of the most pronounced realisations of this heterogeneity is seen in the case of vector-borne pathogens, which spread between ‘hosts’ and ‘vectors’—with each group possessing distinct epidemiological characteristics. As a result, an important question when planning surveillance for emerging vector-borne pathogens is where to place sampling resources in order to detect the pathogen as early as possible. We answer this question by developing a statistical function which describes the probability distributions of the prevalences of infection at first detection in both hosts and vectors. We also show how this method can be adapted in order to maximise the probability of early detection of an emerging pathogen within imposed sample size and/or cost constraints, and demonstrate its application using two simple models of vector-borne citrus pathogens. Under the assumption of a linear cost function, we find that sampling costs are generally minimised when either hosts or vectors, but not both, are sampled

Selective gene silencing by viral delivery of short hairpin RNA

RNA interference (RNAi) technology has not only become a powerful tool for functional genomics, but also allows rapid drug target discovery and in vitro validation of these targets in cell culture. Furthermore, RNAi represents a promising novel therapeutic option for treating human diseases, in particular cancer. Selective gene silencing by RNAi can be achieved essentially by two nucleic acid based methods: i) cytoplasmic delivery of short double-stranded (ds) interfering RNA oligonucleotides (siRNA), where the gene silencing effect is only transient in nature, and possibly not suitable for all applications; or ii) nuclear delivery of gene expression cassettes that express short hairpin RNA (shRNA), which are processed like endogenous interfering RNA and lead to stable gene down-regulation. Both processes involve the use of nucleic acid based drugs, which are highly charged and do not cross cell membranes by free diffusion. Therefore, in vivo delivery of RNAi therapeutics must use technology that enables the RNAi therapeutic to traverse biological membrane barriers in vivo. Viruses and the vectors derived from them carry out precisely this task and have become a major delivery system for shRNA. Here, we summarize and compare different currently used viral delivery systems, give examples of in vivo applications, and indicate trends for new developments, such as replicating viruses for shRNA delivery to cancer cells