Retrospective study on the incidence of Salmonella isolations in animals in South Africa, 1996 to 2006

A retrospective study that involves the analysis of laboratory diagnostic data collected during the period 1996-2006 was conducted. A total of 3417 Salmonella isolations involving 183 different serotypes was recorded from 1999-2006, inclusive, at the Onderstepoort Veterinary Institute, Agricultural Research Council, South Africa. The most common serotypes were Salmonella enterica subspecies enterica serovar Typhimurium (917 incidents), Salmonella enterica subspecies enterica serovar Dublin (248 incidents), Salmonella enterica subspecies enterica serovar Enteritidis (232 incidents), Salmonella enterica subspecies enterica serovar Muenchen (164 incidents), Salmonella enterica subspecies enterica serovar Heidelberg (118 incidents) and Salmonella enterica subspecies enterica serovar Chester (113 incidents). The number of recorded Salmonella isolations over the period 1996 to 2006 varies considerably from year to year. The peak of 693 isolations was recorded in 1997, and the lowest, 108 incidents, in 2001. Of the total incidents recorded during the period of survey, 2410 (70.5 %) occurred in poultry and other birds, 641 (18.75 %) occurred in cattle, 255 (7.46) in pigs and 111 (3.24 %) in sheep. Despite the large number of serotypes isolated (183), 52% of incidents were due to only 6 serotypes in decreasing order of prevalence : S. Typhimurium, S. Dublin, S. Enteritidis, S. Muenchen, S. Heidelberg and S. Chester. Serovar Typhimurium was the most common serotype and was detected in all animal species sampled, with, 65 % (598) of the incidents occurring in poultry and 20 % (187) occurring in cattle. Of the total of 248 incidents of S. Dublin serotype, 95.6 % (237) of incidents occurred in cattle and of the 232 isolates of S. Enteritidis, 223 (96 %) originated from poultry. Serovar Choleraesuis was identified in 16 isolates from pigs. The following 4 serotypes were each recorded in more than 50 incidents : S. Hadar (102), S. Schwarzengrund (99), S. Mbandaka (94) and S. Sandiego (73). The trends of annual incidence of Salmonella infection in cattle, sheep, pigs, poultry and other birds during the 11-year period and the distribution of the main serotypes in individual species of animals from 1996-2006 are discussed

On the role of turbulent large-scale streaks in generating sediment ridges

The role of turbulent large-scale streaks or large-scale motions in forming subaqueous sediment ridges on an initially flat sediment bed is investigated with the aid of particle resolved direct numerical simulations of open channel flow at bulk Reynolds numbers up to 9500. The regular arrangement of quasi-streamwise ridges and troughs at a characteristic spanwise spacing between 1 and 1.5 times the mean fluid height is found to be a consequence of the spanwise organisation of turbulence in large-scale streamwise velocity streaks. Ridges predominantly appear in regions of weaker erosion below large-scale low-speed streaks and vice versa for troughs. The interaction between the dynamics of the large-scale streaks in the bulk flow and the evolution of sediment ridges on the sediment bed is best described as ‘top-down’ process, as the arrangement of the sediment bedforms is seen to adapt to changes in the outer flow with a time delay of several bulk time units. The observed ‘top-down’ interaction between the outer flow and the bed agrees fairly well with the conceptual model on causality in canonical channel flows proposed by Jiménez (J. Fluid Mech., vol. 842, 2018, P1, § 5.6). Mean secondary currents of Prandtl\u27s second kind of comparable intensity and lateral spacing are found over developed sediment ridges and in single-phase smooth-wall channels alike in averages over O(10) bulk time units. This indicates that the secondary flow commonly observed together with sediment ridges is the statistical footprint of the regularly organised large-scale streaks

Evolution of salinity and water table level of the phreatic coastal aquifer of the Emilia Romagna region (Italy)

The coastal aquifers of the Mediterranean region are highly susceptible to seawater intrusion due to a combination of challenges such as land subsidence, high aquifer permeability, urbanization, drainage, and an unsustainable use of water during the dry summer months. The present study is focused on a statistical analysis of groundwater data to evaluate the spatial changes of water level and electrical conductivity in the coastal phreatic aquifer of the Emilia-Romagna (Northeast Italy) for the period from 2009 to 2018. Data from 35 wells distributed across the entire regional coastal area are used to establish a temporal trend, as well as correlations between salinity, water table level, and rainfall. Water table and salinity distribution maps for the entire study area are discussed regarding surface geology and water management. Most of the wells are in the beach wedge sand unit, which allows for easy connectivity between groundwater and surface water. Surface water and groundwater salinization are enhanced along the surface water bodies connected to the sea. The lowest water table level occurs in the western and northern parts of the study area, because of the semiconfined behavior of the aquifer. Only in the northernmost, close to the Po River, and in the southernmost parts of the study area does the groundwater remain fresh for the whole period considered due to river aquifer recharge. In the rest of the region, the thickness of freshwater lenses, where present, is less than 4.5 m. The existence of a water table level below sea level and high saline water at the bottom of the aquifer in most of the study area suggest that the aquifer is in unstable hydrodynamic conditions and groundwater quality is not fit for human consumption or for irrigation. This study is the first to provide a regional overview of the state of groundwater level and salinization within the coastal aquifer of the Emilia-Romagna Region; it also suggests that, overall, the salinization trend has slightly decreased from 2009 to 2018

Contingent valuation analysis of rural households’ willingness to pay for frankincense forest conservation

Frankincense from Boswellia papyrifera forest (BPF) is a traded non timber forest product (NTFP) used in pharmaceutical, food, cosmetic and chemical industries. However, the resource in northeastern Africa is under continuous degradation and requires conservation measures. Data from a discrete choice contingent valuation study are used to assess the factors influencing rural households’ willingness to pay (WTP) and willingness to contribute labor (WTCL) for BPF conservation in Ethiopia. The standard probit, bivariate probit and interval data models were used for modeling respondents’ WTP and WTCL. We found household income as the most important factor affecting WTP whereas number of household labor is the most important factor affecting WTCL. Mean lower bound annual WTP of US$ 4.68 and WTCL of 7.03 days per household were estimated. This study indicated that despite Ethiopia is a low income country, people are willing to contribute for conservation of the resource.Willingness to pay, Boswellia papyrifera, Conservation, Contingent valuation, Resource /Energy Economics and Policy,

Trader-supplier Coordination in the Agrifood Supply Chains in Northern Ethiopia

There exists a huge agrifood potential in Ethiopia. However, the country's agrifood supply chains are underdeveloped to deliver quality supply to traders and supplement household livelihoods from the sector. The key factors that determine the proper functioning of supplier-trader chains were not rigorously investigated, at least in the case study area. This paper aims at examining the key determinants in choosing vertical coordination for agrifood products in Tigray, Northern Ethiopia. Structured questionnaires were administered to 247 traders in 10 towns in Tigray. Probit model was employed to identify the key determinants of vertical coordination. Model results show that market information, product characteristics, firm characteristics, and product quality were found significant factors in determining the adoption of vertical coordination. An interesting finding is that traders tend to vertically coordinate so as to get credit from suppliers. Based on our findings we suggest that strengthening quality assurance and contract enforcement institutions appears to be an important intervention area to improve the agrifood chain in the study area. Moreover, providing financial support to encourage the private sector to operate in agro-processing is among the efforts that need to be focused so that it facilitates the rural development process in the region.vertical coordination, trader, supplier, agrifood, supply chain, Probit Model, Agribusiness,

The first report of onion yellow dwarf virus infecting onion (Allium cepa) in Ethiopia

DATA AVAILABILITY : The sequence data generated in this study is available as the GenBank accession number OP882302 – OP882306.No abstract available.https://link.springer.com/journal/421612024-03-13hj2024Forestry and Agricultural Biotechnology Institute (FABI)Plant Production and Soil ScienceNon

Patient-clinician collaboration in making care fit:A qualitative analysis of clinical consultations in diabetes care

Objective: To confirm described dimensions of making care fit and explore how patients and clinicians collaborate to make care fit in clinical practice. Methods: As part of an ongoing study, we audiotaped and transcribed patient-clinician consultations in diabetes care. We purposively selected consultations based on participants’ demographical, biomedical and biographical characteristics. We analysed transcripts using reflexive thematic analysis. We combined a deductive and inductive approach, using the pre-described dimensions of making care fit and adding new (sub-)dimensions when pertinent. Results: We analysed 24 clinical consultations. Our data confirmed eight previously described dimensions and provided new sub-dimensions of making care fit with examples from clinical practice (problematic situation, influence of devices, sense of options, shared agenda setting, clinician context, adapting to changing organization of care, and possibility to reconsider). Conclusion: Our study confirmed, specified and enriched the conceptualization of making care fit through practice examples. We observed patient-clinician collaboration in exploration of patients’ context, and by responsively changing, adapting or maintaining care plans. Practice implications: Our findings support clinicians and researchers with insights in important aspects of patient-clinician collaboration. Ultimately, this would lead to optimal design of care plans that fit well in each patient life.</p

Patient-clinician collaboration in making care fit:A qualitative analysis of clinical consultations in diabetes care

Objective: To confirm described dimensions of making care fit and explore how patients and clinicians collaborate to make care fit in clinical practice. Methods: As part of an ongoing study, we audiotaped and transcribed patient-clinician consultations in diabetes care. We purposively selected consultations based on participants’ demographical, biomedical and biographical characteristics. We analysed transcripts using reflexive thematic analysis. We combined a deductive and inductive approach, using the pre-described dimensions of making care fit and adding new (sub-)dimensions when pertinent. Results: We analysed 24 clinical consultations. Our data confirmed eight previously described dimensions and provided new sub-dimensions of making care fit with examples from clinical practice (problematic situation, influence of devices, sense of options, shared agenda setting, clinician context, adapting to changing organization of care, and possibility to reconsider). Conclusion: Our study confirmed, specified and enriched the conceptualization of making care fit through practice examples. We observed patient-clinician collaboration in exploration of patients’ context, and by responsively changing, adapting or maintaining care plans. Practice implications: Our findings support clinicians and researchers with insights in important aspects of patient-clinician collaboration. Ultimately, this would lead to optimal design of care plans that fit well in each patient life.</p