Measurements of Penetration and Detoxification of PS II Herbicides in Whole Leaves by a Fluorometric Method

The effect of herbicides that inhibit the photosynthetic electron transport at the photosystem II acceptor side has been analyzed in whole plants by using a fluorometric method. The data reported indicate that the apparent variable fluorescence of the induction curve normalized to the control value provides reliable information about the penetration rate and metabolic detoxification of PS II herbicides in whole plants

Margins of International Banking: Is there a Productivity Pecking Order in Banking, too?

Modern trade theory emphasizes firm-level productivity differentials to explain the cross-border activities of non-financial firms. This study tests whether a productivity pecking order also determines international banking activities. Using a novel dataset that contains all German banks’ international activities, we estimate the ordered probability of a presence abroad (extensive margin) and the volume of international assets (intensive margin). Methodologically, we enrich the conventional Heckman selection model to account for the self-selection of banks into different modes of foreign activities using an ordered probit. Four main findings emerge. First, similar to results for non-financial firms, a productivity pecking order drives bank internationalization. Second, only a few non-financial firms engage in international trade, but many banks hold international assets, and only a few large banks engage in foreign direct investment. Third, in addition to productivity, risk factors matter for international banking. Fourth, gravity-type variables have an important impact on international banking activities.

Motion of four-dimensional rigid body around a fixed point: an elementary approach. I

The goal of this note is to give the explicit solution of Euler-Frahm equations for the Manakov four-dimensional case by elementary means. For this, we use some results from the original papers by Schottky [Sch 1891], Koetter [Koe 1892], Weber [We 1878], and Caspary [Ca 1893]. We hope that such approach will be useful for the solution of the problem of $n$-dimensional top.Comment: LaTeX, 9 page

From Functional Genomics to Functional Immunomics: New Challenges, Old Problems, Big Rewards

The development of DNA microarray technology a decade ago led to the establishment of functional genomics as one of the most active and successful scientific disciplines today. With the ongoing development of immunomic microarray technology—a spatially addressable, large-scale technology for measurement of specific immunological response—the new challenge of functional immunomics is emerging, which bears similarities to but is also significantly different from functional genomics. Immunonic data has been successfully used to identify biological markers involved in autoimmune diseases, allergies, viral infections such as human immunodeficiency virus (HIV), influenza, diabetes, and responses to cancer vaccines. This review intends to provide a coherent vision of this nascent scientific field, and speculate on future research directions. We discuss at some length issues such as epitope prediction, immunomic microarray technology and its applications, and computation and statistical challenges related to functional immunomics. Based on the recent discovery of regulation mechanisms in T cell responses, we envision the use of immunomic microarrays as a tool for advances in systems biology of cellular immune responses, by means of immunomic regulatory network models

On integration of the Kowalevski gyrostat and the Clebsch problems

For the Kowalevski gyrostat change of variables similar to that of the Kowalevski top is done. We establish one to one correspondence between the Kowalevski gyrostat and the Clebsch system and demonstrate that Kowalevski variables for the gyrostat practically coincide with elliptic coordinates on sphere for the Clebsch case. Equivalence of considered integrable systems allows to construct two Lax matrices for the gyrostat using known rational and elliptic Lax matrices for the Clebsch model. Associated with these matrices solutions of the Clebsch system and, therefore, of the Kowalevski gyrostat problem are discussed. The Kotter solution of the Clebsch system in modern notation is presented in detail.Comment: LaTeX, 24 page

Robust vetoes for gravitational-wave burst triggers using known instrumental couplings

The search for signatures of transient, unmodelled gravitational-wave (GW) bursts in the data of ground-based interferometric detectors typically uses `excess-power' search methods. One of the most challenging problems in the burst-data-analysis is to distinguish between actual GW bursts and spurious noise transients that trigger the detection algorithms. In this paper, we present a unique and robust strategy to `veto' the instrumental glitches. This method makes use of the phenomenological understanding of the coupling of different detector sub-systems to the main detector output. The main idea behind this method is that the noise at the detector output (channel H) can be projected into two orthogonal directions in the Fourier space -- along, and orthogonal to, the direction in which the noise in an instrumental channel X would couple into H. If a noise transient in the detector output originates from channel X, it leaves the statistics of the noise-component of H orthogonal to X unchanged, which can be verified by a statistical hypothesis testing. This strategy is demonstrated by doing software injections in simulated Gaussian noise. We also formulate a less-rigorous, but computationally inexpensive alternative to the above method. Here, the parameters of the triggers in channel X are compared to the parameters of the triggers in channel H to see whether a trigger in channel H can be `explained' by a trigger in channel X and the measured transfer function.Comment: 14 Pages, 8 Figures, To appear in Class. Quantum Gra

Discovery of Novel Term Associations in a Document Collection

Non peer reviewe

Whole Exome Sequencing Identifies Rare Protein-Coding Variants in Behçet's Disease

Behçet's disease (BD) is a systemic inflammatory disease with an incompletely understood etiology. Despite the identification of multiple common genetic variants associated with BD, rare genetic variants have been less explored. We undertook this study to investigate the role of rare variants in BD by performing whole exome sequencing in BD patients of European descent. METHODS: Whole exome sequencing was performed in a discovery set comprising 14 German BD patients of European descent. For replication and validation, Sanger sequencing and Sequenom genotyping were performed in the discovery set and in 2 additional independent sets of 49 German BD patients and 129 Italian BD patients of European descent. Genetic association analysis was then performed in BD patients and 503 controls of European descent. Functional effects of associated genetic variants were assessed using bioinformatic approaches. RESULTS: Using whole exome sequencing, we identified 77 rare variants (in 74 genes) with predicted protein-damaging effects in BD. These variants were genotyped in 2 additional patient sets and then analyzed to reveal significant associations with BD at 2 genetic variants detected in all 3 patient sets that remained significant after Bonferroni correction. We detected genetic association between BD and LIMK2 (rs149034313), involved in regulating cytoskeletal reorganization, and between BD and NEIL1 (rs5745908), involved in base excision DNA repair (P = 3.22 × 10(-4) and P = 5.16 × 10(-4) , respectively). The LIMK2 association is a missense variant with predicted protein damage that may influence functional interactions with proteins involved in cytoskeletal regulation by Rho GTPase, inflammation mediated by chemokine and cytokine signaling pathways, T cell activation, and angiogenesis (Bonferroni-corrected P = 5.63 × 10(-14) , P = 7.29 × 10(-6) , P = 1.15 × 10(-5) , and P = 6.40 × 10(-3) , respectively). The genetic association in NEIL1 is a predicted splice donor variant that may introduce a deleterious intron retention and result in a noncoding transcript variant. CONCLUSION: We used whole exome sequencing in BD for the first time and identified 2 rare putative protein-damaging genetic variants associated with this disease. These genetic variants might influence cytoskeletal regulation and DNA repair mechanisms in BD and might provide further insight into increased leukocyte tissue infiltration and the role of oxidative stress in BD