85 research outputs found

    A microporous metal-organic framework constructed from a 1D column made of linear trinuclear manganese secondary building units

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    A metal-organic framework (MOF) was prepared based on a 1D column made of a linear trinuclear manganese cluster as a secondary building unit (SBU), where the SBU is connected to two adjacent SBUs by carboxylates to form a 1D column and the column is further connected to four adjacent 1D columns via the SBUs to form a microporous MOF of pcu network topology.close7

    Automatic Network Adaptation for Ultra-Low Uniform-Precision Quantization

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    Uniform-precision neural network quantization has gained popularity since it simplifies densely packed arithmetic unit for high computing capability. However, it ignores heterogeneous sensitivity to the impact of quantization errors across the layers, resulting in sub-optimal inference accuracy. This work proposes a novel neural architecture search called neural channel expansion that adjusts the network structure to alleviate accuracy degradation from ultra-low uniform-precision quantization. The proposed method selectively expands channels for the quantization sensitive layers while satisfying hardware constraints (e.g., FLOPs, PARAMs). Based on in-depth analysis and experiments, we demonstrate that the proposed method can adapt several popular networks channels to achieve superior 2-bit quantization accuracy on CIFAR10 and ImageNet. In particular, we achieve the best-to-date Top-1/Top-5 accuracy for 2-bit ResNet50 with smaller FLOPs and the parameter size.Comment: Accepted as a full paper by the TinyML Research Symposium 202

    An Analytical Model-based Capacity Planning Approach for Building CSD-based Storage Systems

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    The data movement in large-scale computing facilities (from compute nodes to data nodes) is categorized as one of the major contributors to high cost and energy utilization. To tackle it, in-storage processing (ISP) within storage devices, such as Solid-State Drives (SSDs), has been explored actively. The introduction of computational storage drives (CSDs) enabled ISP within the same form factor as regular SSDs and made it easy to replace SSDs within traditional compute nodes. With CSDs, host systems can offload various operations such as search, filter, and count. However, commercialized CSDs have different hardware resources and performance characteristics. Thus, it requires careful consideration of hardware, performance, and workload characteristics for building a CSD-based storage system within a compute node. Therefore, storage architects are hesitant to build a storage system based on CSDs as there are no tools to determine the benefits of CSD-based compute nodes to meet the performance requirements compared to traditional nodes based on SSDs. In this work, we proposed an analytical model-based storage capacity planner called CSDPlan for system architects to build performance-effective CSD-based compute nodes. Our model takes into account the performance characteristics of the host system, targeted workloads, and hardware and performance characteristics of CSDs to be deployed and provides optimal configuration based on the number of CSDs for a compute node. Furthermore, CSDPlan estimates and reduces the total cost of ownership (TCO) for building a CSD-based compute node. To evaluate the efficacy of CSDPlan, we selected two commercially available CSDs and 4 representative big data analysis workloads

    Associations between Household Latrines and the Prevalence of Diarrhea in Idiofa, Democratic Republic of the Congo: A Cross-Sectional Study.

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    Despite the importance of sanitation, few studies have assessed the effects of latrines on the health outcomes of children under 5 years of age. We assessed the relations between latrine coverage and the prevalence of diarrhea in children under 4 years of age. In this cross-sectional study, we analyzed the baseline data obtained as part of a longitudinal survey targeting 720 households in Idiofa, Bandundu, Democratic Republic of the Congo. We categorized latrines according to the presence of each major component and investigated whether diarrhea prevalence of children under 4 years of age is associated with latrine availability and improvement. Latrines have health benefits regardless of whether they are improved. Also worth noting is that comparatively well-equipped and more appropriately managed latrines could prevent child diarrhea more effectively than less equipped or inappropriately managed latrines. Households who have a latrine with a superstructure, roof, and no flies (a partly improved latrine) were found to be 52% less likely to report cases of diarrhea than households with unimproved latrines (adjusted odds ratio [OR] = 0.48, confidence interval [CI] = 0.31-0.76), which are all the other latrines not included in the partly improved latrine category. We have observed the profound protective effect of latrines with a superstructure. This study demonstrates that latrines are associated with significant improvements in health even when they do not fully meet the conditions of improved latrines. This study adds value to the limited evidence on the effect of latrines on health parameters by demonstrating that latrines have correlations with health benefits regardless of whether they are improved, as well as by elucidating the most essential components of improved latrines

    Application of a new microcantilever biosensor resonating at the air–liquid interface for direct insulin detection and continuous monitoring of enzymatic reactions

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    Here we describe the application of a recently developed high-resolution microcantilever biosensor resonating at the air–liquid interface for the continuous detection of antigen–antibody and enzyme–substrate interactions. The cantilever at the air–liquid interface demonstrated 50% higher quality factor and a 5.7-fold increase in signal-to-noise-ratio (SNR) compared with one immersed in the purified water. First, a label-free detection of a low molecular weight protein (insulin, 5.8 kDa) in physiological concentration was demonstrated. The liquid facing side of the cantilever was functionalized by coating its surface with insulin antibodies, while the opposite side was exposed to air. The meniscus membrane at the micro-slit around the cantilever sustained the liquid in the microchannel. After optimizing the process of surface functionalization, the resonance frequency shift was successfully measured for insulin solutions of 0.4, 2.0, and 6.3 ng ml^(−1). To demonstrate additional application of the device for monitoring enzymatic protein degradation, the liquid facing microcantilever surface was coated with human recombinant SOD1 (superoxide dismutase 1) and exposed to various concentrations of proteinase K solution, and the kinetics of the SOD1 digestion was continuously monitored. The results showed that it is a suitable tool for sensitive protein detection and analysis

    Reduced radiation exposure to circulating blood cells in proton therapy compared with X-ray therapy in locally advanced lung cancer: Computational simulation based on circulating blood cells

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    BackgroundWe estimated the dose of circulating blood cells (CBCs) in patients with locally advanced non-small cell lung cancer for predicting severe radiation-induced lymphopenia (SRIL) and compared pencil-beam scanning proton therapy (PBSPT) and intensity-modulated (photon) radiotherapy (IMRT).Materials and methodsAfter reviewing 325 patients who received definitive chemoradiotherapy with PBSPT (n = 37) or IMRT (n = 164). SRIL was diagnosed when two or more events of an absolute lymphocyte count < 200 µL occurred during the treatment course. Dose information for the heart and lungs was utilized for the time-dependent computational dose calculation of CBCs.ResultsThe dose distribution of CBCs was significantly lesser in the PBSPT group than that in the IMRT group. Overall, 75 (37.3%) patients experienced SRIL during the treatment course; 72 and 3 patients were treated with IMRT and PBSPT, respectively. SRIL was associated with poor progression-free and overall survival outcomes. Upon incorporating the dose information of CBCs for predicting SRIL, CBC D90% > 2.6 GyE was associated with the development of SRIL with the baseline lymphocyte count and target volume. Furthermore, PBSPT significantly reduced the dose of CBC D90% (odds ratio = 0.11; p = 0.004) compared with IMRT.ConclusionThe results of this study demonstrate the significance of the dose distribution of CBCs in predicting SRIL. Furthermore, reducing the dose of CBCs after PBSPT minimized the risk of SRIL. Lymphocyte-sparing radiotherapy in PBSPT could improve outcomes, particularly in the setting of maintenance immunotherapy

    Comparative genome analysis of rice-pathogenic Burkholderia provides insight into capacity to adapt to different environments and hosts

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    This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited.Background In addition to human and animal diseases, bacteria of the genus Burkholderia can cause plant diseases. The representative species of rice-pathogenic Burkholderia are Burkholderia glumae, B. gladioli, and B. plantarii, which primarily cause grain rot, sheath rot, and seedling blight, respectively, resulting in severe reductions in rice production. Though Burkholderia rice pathogens cause problems in rice-growing countries, comprehensive studies of these rice-pathogenic species aiming to control Burkholderia-mediated diseases are only in the early stages. Results We first sequenced the complete genome of B. plantarii ATCC 43733T. Second, we conducted comparative analysis of the newly sequenced B. plantarii ATCC 43733T genome with eleven complete or draft genomes of B. glumae and B. gladioli strains. Furthermore, we compared the genome of three rice Burkholderia pathogens with those of other Burkholderia species such as those found in environmental habitats and those known as animal/human pathogens. These B. glumae, B. gladioli, and B. plantarii strains have unique genes involved in toxoflavin or tropolone toxin production and the clustered regularly interspaced short palindromic repeats (CRISPR)-mediated bacterial immune system. Although the genome of B. plantarii ATCC 43733T has many common features with those of B. glumae and B. gladioli, this B. plantarii strain has several unique features, including quorum sensing and CRISPR/CRISPR-associated protein (Cas) systems. Conclusions The complete genome sequence of B. plantarii ATCC 43733T and publicly available genomes of B. glumae BGR1 and B. gladioli BSR3 enabled comprehensive comparative genome analyses among three rice-pathogenic Burkholderia species responsible for tissue rotting and seedling blight. Our results suggest that B. glumae has evolved rapidly, or has undergone rapid genome rearrangements or deletions, in response to the hosts. It also, clarifies the unique features of rice pathogenic Burkholderia species relative to other animal and human Burkholderia species
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