A theoretical quantitative genetic study of negative ecological interactions and extinction times in changing environments

<p>Abstract</p> <p>Background</p> <p>Rapid human-induced changes in the environment at local, regional and global scales appear to be contributing to population declines and extinctions, resulting in an unprecedented biodiversity crisis. Although in the short term populations can respond ecologically to environmental alterations, in the face of persistent change populations must evolve or become extinct. Existing models of evolution and extinction in changing environments focus only on single species, even though the dynamics of extinction almost certainly depend upon the nature of species interactions.</p> <p>Results</p> <p>Here, I use a model of quantitative trait evolution in a two-species community to show that negative ecological interactions, such as predation and competition, can produce unexpected results regarding time to extinction. Under some circumstances, negative interactions can be expected to hasten the extinction of species declining in numbers. However, under other circumstances, negative interactions can actually increase times to extinction. This effect occurs across a wide range of parameter values and can be substantial, in some cases allowing a population to persist for 40 percent longer than it would in the absence of the species interaction.</p> <p>Conclusion</p> <p>This theoretical study indicates that negative species interactions can have unexpected positive effects on times to extinction. Consequently, detailed studies of selection and demographics will be necessary to predict the consequences of species interactions in changing environments for any particular ecological community.</p

Nematic cells with defect-patterned alignment layers

Using Monte Carlo simulations of the Lebwohl--Lasher model we study the director ordering in a nematic cell where the top and bottom surfaces are patterned with a lattice of $\pm 1$ point topological defects of lattice spacing $a$. We find that the nematic order depends crucially on the ratio of the height of the cell $H$ to $a$. When $H/a \gtrsim 0.9$ the system is very well--ordered and the frustration induced by the lattice of defects is relieved by a network of half--integer defect lines which emerge from the point defects and hug the top and bottom surfaces of the cell. When $H/a \lesssim 0.9$ the system is disordered and the half--integer defect lines thread through the cell joining point defects on the top and bottom surfaces. We present a simple physical argument in terms of the length of the defect lines to explain these results. To facilitate eventual comparison with experimental systems we also simulate optical textures and study the switching behavior in the presence of an electric field

The 2MASS Wide-Field T Dwarf Search. IV Unting out T dwarfs with Methane Imaging

We present first results from a major program of methane filter photometry for low-mass stars and brown dwarfs. The definition of a new methane filter photometric system is described. A recipe is provided for the differential calibration of methane imaging data using existing 2MASS photometry. We show that these filters are effective in discriminating T dwarfs from other types of stars, and demonstrate this with Anglo-Australian Telescope observations using the IRIS2 imager. Methane imaging data and proper motions are presented for ten T dwarfs identified as part of the 2MASS "Wide Field T Dwarf Search" -- seven of them initially identified as T dwarfs using methane imaging. We also present near-infrared moderate resolution spectra for five T dwarfs, newly discovered by this technique. Spectral types obtained from these spectra are compared to those derived from both our methane filter observations, and spectral types derived by other observers. Finally, we suggest a range of future programs to which these filters are clearly well suited: the winnowing of T dwarf and Y dwarf candidate objects coming from the next generation of near-infrared sky surveys; the robust detection of candidate planetary-mass brown dwarfs in clusters; the detection of T dwarf companions to known L and T dwarfs via deep methane imaging; and the search for rotationally-modulated time-variable surface features on cool brown dwarfs.Comment: 20 pages. To appear in The Astronomical Journal, Nov. 200

The Measurement of Sexual Selection Using Bateman's Principles: An Experimental Test in the Sex-Role-Reversed Pipefish Syngnathus typhle.

Angus J. Bateman's classic study of sexual selection in Drosophila melanogaster has had a major influence on the development of sexual selection theory. In some ways, Bateman's study has served a catalytic role by stimulating debate on sex roles, sexual conflict and other topics in sexual selection. However, there is still considerable disagreement regarding whether or not "Bateman's principles" are helpful in the study of sexual selection. Here, we test the idea that Bateman's principles provide the basis for a useful method to quantify and compare mating systems. In this study, we focus on the sex-role-reversed pipefish Syngnathus typhle as a model system to study the measurement of sexual selection. We set up artificial breeding assemblages of pipefish in the laboratory and used microsatellite markers to resolve parentage. Three different sex-ratio treatments (female-biased, even and male-biased) were used to manipulate the expected intensity of sexual selection. Measures of the mating system based on Bateman's principles were calculated and compared to the expected changes in the intensity of sexual selection. We also compare the results of this study to the results of a similar study of Bateman's principles in the rough-skinned newt, a species with conventional sex roles. The results of this experiment show that measures of the mating system based on Bateman's principles do accurately capture the relative intensities of sexual selection in the different treatments and species. Thus, widespread use of Bateman's principles to quantify mating systems in nature would facilitate comparative studies of sexual selection and mating system evolution

A microarray analysis of sex- and gonad-biased gene expression in the zebrafish: Evidence for masculinization of the transcriptome

<p>Abstract</p> <p>Background</p> <p>In many taxa, males and females are very distinct phenotypically, and these differences often reflect divergent selective pressures acting on the sexes. Phenotypic sexual dimorphism almost certainly reflects differing patterns of gene expression between the sexes, and microarray studies have documented widespread sexually dimorphic gene expression. Although the evolutionary significance of sexual dimorphism in gene expression remains unresolved, these studies have led to the formulation of a hypothesis that male-driven evolution has resulted in the masculinization of animal transcriptomes. Here we use a microarray assessment of sex- and gonad-biased gene expression to test this hypothesis in zebrafish.</p> <p>Results</p> <p>By using zebrafish Affymetrix microarrays to compare gene expression patterns in male and female somatic and gonadal tissues, we identified a large number of genes (5899) demonstrating differences in transcript abundance between male and female <it>Danio rerio</it>. Under conservative statistical significance criteria, all sex-biases in gene expression were due to differences between testes and ovaries. Male-enriched genes were more abundant than female-enriched genes, and expression bias for male-enriched genes was greater in magnitude than that for female-enriched genes. We also identified a large number of genes demonstrating elevated transcript abundance in testes and ovaries relative to male body and female body, respectively.</p> <p>Conclusion</p> <p>Overall our results support the hypothesis that male-biased evolutionary pressures have resulted in male-biased patterns of gene expression. Interestingly, our results seem to be at odds with a handful of other microarray-based studies of sex-specific gene expression patterns in zebrafish. However, ours was the only study designed to address this specific hypothesis, and major methodological differences among studies could explain the discrepancies. Regardless, all of these studies agree that transcriptomic sex differences in <it>D. rerio </it>are widespread despite the apparent absence of heterogamety. These differences likely make important contributions to phenotypic sexual dimorphism in adult zebrafish; thus, from an evolutionary standpoint, the precise roles of sex-specific selection and sexual conflict in the evolution of sexually dimorphic gene expression are very important. The results of our study and others like it set the stage for further work aimed at directly addressing this exciting issue in comparative genomics.</p

Multiple mating and a low incidence of cuckoldry for nest-holding males in the two-spotted goby, Gobiusculus flavescens

Background: A major question in behavioural ecology concerns the relationship between genetic mating systems and the strength of sexual selection. In this study, we investigated the genetic mating system of the two-spotted goby (Gobiusculus flavescens), a useful fish model for the study of sexual selection whose genetic mating system remains uncharacterized. We developed four polymorphic microsatellite markers and used them to conduct parentage analyses on 21 nests collected during the breeding season to examine the rates of multiple mating by males and to test for evidence of alternative mating strategies.Results: Results of this study indicate that male G. flavescens mate with multiple females and enjoy confidence of paternity. We detected only one instance of sneaking, so cuckoldry contributed a very small percentage (~0.1%) of the total fertilizations in this population. Nests were nearly full and males that maintain larger nests have higher mating and reproductive success, irrespective of body size.Conclusion: Overall, our investigation shows that G. flavescens is similar to other, related gobies in that the nests of care-giving males often contain eggs from multiple females. However, G. flavescens differs from other gobies in displaying an extremely low rate of cuckoldry. The study of ecological factors responsible for this important<br /

The MHD Kelvin-Helmholtz Instability III: The Role of Sheared Magnetic Field in Planar Flows

We have carried out simulations of the nonlinear evolution of the magnetohydrodynamic (MHD) Kelvin-Helmholtz (KH) instability for compressible fluids in $2\frac{1}{2}$-dimensions, extending our previous work by Frank et al (1996) and Jones \etal (1997). In the present work we have simulated flows in the x-y plane in which a ``sheared'' magnetic field of uniform strength ``smoothly'' rotates across a thin velocity shear layer from the z direction to the x direction, aligned with the flow field. We focus on dynamical evolution of fluid features, kinetic energy dissipation, and mixing of the fluid between the two layers, considering their dependence on magnetic field strength for this geometry. The introduction of magnetic shear can allow a Cat's Eye-like vortex to form, even when the field is stronger than the nominal linear instability limit given above. For strong fields that vortex is asymmetric with respect to the preliminary shear layer, however, so the subsequent dissipation is enhanced over the uniform field cases of comparable field strength. In fact, so long as the magnetic field achieves some level of dynamical importance during an eddy turnover time, the asymmetries introduced through the magnetic shear will increase flow complexity, and, with that, dissipation and mixing. The degree of the fluid mixing between the two layers is strongly influenced by the magnetic field strength. Mixing of the fluid is most effective when the vortex is disrupted by magnetic tension during transient reconnection, through local chaotic behavior that follows.Comment: 14 pages including 9 figures (4 figures in degraded jpg format), full paper with original quality figures available via anonymous ftp at ftp://canopus.chungnam.ac.kr/ryu/mhdkh2d.uu, to appear in The Astrophysical Journa