472 research outputs found

    Prevalence, Co-Occurring Difficulties, and Risk Factors of Developmental Language Disorder: First Evidence for Mandarin-Speaking Children in a Population-Based Study

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    Developmental language disorder (DLD) is a condition that significantly affects children\u27s achievement but has been understudied. We aim to estimate the prevalence of DLD in Shanghai, compare the co-occurrence of difficulties between children with DLD and those with typical development (TD), and investigate the early risk factors for DLD

    Endogenous retrovirus RNA expression differences between race, stage and HPV status offer improved prognostication among women with cervical cancer

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    Endogenous human retroviruses (ERVs) are remnants of exogenous retroviruses that have integrated into the human genome. Using publicly available RNA-seq data from 63 cervical cancer patients, we investigated the expression of ERVs in cervical cancers. Four aspects of cervical cancer were investigated: patient ancestral background, tumor HPV type, tumor stage and patient survival. Between the racial subgroups, 74 ERVs were significantly differentially expressed, with Black Americans having 30 upregulated and 44 downregulated (including MER21C, HERV9-int, and HERVH-int) ERVs when compared to White Americans. We found that 3313 ERVs were differentially expressed between HPV subgroups, including MER41A, HERVH-int and HERVK9. There were 28 downregulated (including MLT1D and HERVH-int) and 61 upregulated (including MER41A) ERVs in locally advanced-stage compared to early-stage samples. Tissue microarrays of cervical cancer patients were used to investigate the protein expression of ERVs with protein coding potential (i.e., HERVK and ERV3). Significant differences in protein expression of ERV3

    Rapid 5 lb Weight Gain Is Not Associated with Readmission in Patients with Heart Failure

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    Aims Heart failure (HF) patients are taught to identify a rapid 5 lb body‐weight gain for early detection of cardiac decompensation. Few data support this common advice. The study aim was to determine whether a 5 lb weight gain in 1 week and signs and symptoms of HF increased risk for unplanned physician or emergency department (ED) visits or hospital admission in rural HF patients. Methods and results This was a secondary analysis of a randomized trial. Patients tracked body weight and HF symptoms using diaries. We included patients adherent to daily diaries \u3e 50% over 24 months (N = 119). Mean age was 69 ± 11 years; 77% (65) were male, and 67% completed diaries. A weight gain of 5 lb over 7 days was associated with a greater risk for ED visits but not hospital admission [hazard ratio (HR) 1.06, 95% confidence interval (CI) 1.04, 1.08; P \u3c 0.0001 vs. HR 1.01, 95% CI 0.88, 1.16; P = 0.79]. Increased dyspnoea over 7 days was associated with a greater risk of ED visits and hospital admissions (HR 9.64, 95% CI 3.68, 25.22; P \u3c 0.0001 vs. HR 5.89, 95% CI 1.73, 20.04; P = 0.01). Higher diary adherence was associated with older age, non‐sedentary behaviour, lower depression, and HF knowledge. Conclusions Heart failure patients are counselled to observe for body‐weight gain. Our data do not support that a 5 lb weight gain was associated with hospital admission. Dyspnoea was a better predictor of ED visits and hospital admissions. Daily tracking of dyspnoea symptoms may be an important adjunct to daily weight to prevent hospitalization

    Selenium level and depressive symptoms in a rural elderly Chinese cohort

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    BACKGROUND: Selenium is considered a protective agent against free radicals through the maintenance of better enzyme activity. The few studies examining the relationship between selenium and depression have yielded inconsistent results and none of these studies considered the role of cognitive function in this context. METHODS: A cross-sectional evaluation of 1737 rural Chinese age 65 and over from two provinces in China was conducted. Depressive symptoms were assessed using the Geriatric Depression Scale (GDS). Cognitive function was assessed using various cognitive instruments. Selenium measures were obtained from nail samples. Other information collected included demographic characteristics and medical history. Analysis of covariance models were used to identify factors associated with GDS score. RESULTS: Higher selenium levels were associated with lower GDS scores adjusting for demographic and medical conditions (p = 0.0321). However, the association between selenium and depressive symptoms was no longer significant when cognitive function score was adjusted in the model (p = 0.2143). CONCLUSIONS: Higher selenium level was associated with lower depressive symptoms without adjusting for cognition in this cohort. However, after cognition was adjusted in the model the association between selenium and depressive symptoms was no longer significant, suggesting that selenium’s association with depressive symptoms may be primarily through its association with cognitive function

    Flow pathways and nutrient transport mechanisms drive hydrochemical sensitivity to climate change across catchments with different geology and topography

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    Hydrological processes determine the transport of nutrients and passage of diffuse pollution. Consequently, catchments are likely to exhibit individual hydrochemical responses (sensitivities) to climate change, which are expected to alter the timing and amount of runoff, and to impact in-stream water quality. In developing robust catchment management strategies and quantifying plausible future hydrochemical conditions it is therefore equally important to consider the potential for spatial variability in, and causal factors of, catchment sensitivity, as it is to explore future changes in climatic pressures. This study seeks to identify those factors which influence hydrochemical sensitivity to climate change. A perturbed physics ensemble (PPE), derived from a series of global climate model (GCM) variants with specific climate sensitivities was used to project future climate change and uncertainty. Using the INtegrated CAtchment model of Phosphorus dynamics (INCA-P), we quantified potential hydrochemical responses in four neighbouring catchments (with similar land use but varying topographic and geological characteristics) in southern Ontario, Canada. Responses were assessed by comparing a 30 year baseline (1968-1997) to two future periods: 2020-2049 and 2060-2089. Although projected climate change and uncertainties were similar across these catchments, hydrochemical responses (sensitivities) were highly varied. Sensitivity was governed by quaternary geology (influencing flow pathways) and nutrient transport mechanisms. Clay-rich catchments were most sensitive, with total phosphorus (TP) being rapidly transported to rivers via overland flow. In these catchments large annual reductions in TP loads were projected. Sensitivity in the other two catchments, dominated by sandy loams, was lower due to a larger proportion of soil matrix flow, longer soil water residence times and seasonal variability in soil-P saturation. Here smaller changes in TP loads, predominantly increases, were projected. These results suggest that the clay content of soils could be a good indicator of the sensitivity of catchments to climatic input, and reinforces calls for catchment-specific management plans

    From cheek swabs to consensus sequences : an A to Z protocol for high-throughput DNA sequencing of complete human mitochondrial genomes

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    Background: Next-generation DNA sequencing (NGS) technologies have made huge impacts in many fields of biological research, but especially in evolutionary biology. One area where NGS has shown potential is for high-throughput sequencing of complete mtDNA genomes (of humans and other animals). Despite the increasing use of NGS technologies and a better appreciation of their importance in answering biological questions, there remain significant obstacles to the successful implementation of NGS-based projects, especially for new users. Results: Here we present an ‘A to Z’ protocol for obtaining complete human mitochondrial (mtDNA) genomes – from DNA extraction to consensus sequence. Although designed for use on humans, this protocol could also be used to sequence small, organellar genomes from other species, and also nuclear loci. This protocol includes DNA extraction, PCR amplification, fragmentation of PCR products, barcoding of fragments, sequencing using the 454 GS FLX platform, and a complete bioinformatics pipeline (primer removal, reference-based mapping, output of coverage plots and SNP calling). Conclusions: All steps in this protocol are designed to be straightforward to implement, especially for researchers who are undertaking next-generation sequencing for the first time. The molecular steps are scalable to large numbers (hundreds) of individuals and all steps post-DNA extraction can be carried out in 96-well plate format. Also, the protocol has been assembled so that individual ‘modules’ can be swapped out to suit available resources
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