The hornwort genome and early land plant evolution

Hornworts, liverworts and mosses are three early diverging clades of land plants, and together comprise the bryophytes. Here, we report the draft genome sequence of the hornwort Anthoceros angustus. Phylogenomic inferences confirm the monophyly of bryophytes, with hornworts sister to liverworts and mosses. The simple morphology of hornworts correlates with low genetic redundancy in plant body plan, while the basic transcriptional regulation toolkit for plant development has already been established in this early land plant lineage. Although the Anthoceros genome is small and characterized by minimal redundancy, expansions are observed in gene families related to RNA editing, UV protection and desiccation tolerance. The genome of A. angustus bears the signatures of horizontally transferred genes from bacteria and fungi, in particular of genes operating in stress-response and metabolic pathways. Our study provides insight into the unique features of hornworts and their molecular adaptations to live on land

SPATIOTEMPORAL DISTUIBUTION OF BACTERIAL ABUNDANCE,BIOMASS,PRODUCTIVITY AND TOTAL COLIFORMS IN XIAMEN WESTERN SEA AREA

This work was supported by NSFC(No.30070175),NSF of Fujian Province(No.D0020001) and Ministry of Education foundation for Univ

Climate change and anthropogenic impacts on marine ecosystems and countermeasures in China

The ecosystems of China seas and coasts are undergoing rapid changes under the strong influences of both global climate change and anthropogenic activities. To understand the scope of these changes and the mechanisms behind them is of paramount importance for the sustainable development of China, and for the establishment of national policies on environment protection and climate change mitigation. Here we provide a brief review of the impacts of global climate change and human activities on the oceans in general, and on the ecosystems of China seas and coasts in particular. More importantly, we discuss the challenges we are facing and propose several research foci for China seas/coasts ecosystem studies, including long-term time series observations on multiple scales, facilities for simulation study, blue carbon, coastal ecological security, prediction of ecosystem evolution and ecosystem-based management. We also establish a link to the Future Earth program from the perspectives of two newly formed national alliances, the China Future Ocean Alliance and the Pan-China Ocean Carbon Alliance

Climate change and anthropogenic impacts on marine ecosystems and countermeasures in China

The ecosystems of China seas and coasts are undergoing rapid changes under the strong influences of both global climate change and anthropogenic activities. To understand the scope of these changes and the mechanisms behind them is of paramount importance for the sustainable development of China, and for the establishment of national policies on environment protection and climate change mitigation. Here we provide a brief review of the impacts of global climate change and human activities on the oceans in general, and on the ecosystems of China seas and coasts in particular. More importantly, we discuss the challenges we are facing and propose several research foci for China seas/coasts ecosystem studies, including long-term time series observations on multiple scales, facilities for simulation study, blue carbon, coastal ecological security, prediction of ecosystem evolution and ecosystem-based management. We also establish a link to the Future Earth program from the perspectives of two newly formed national alliances, the China Future Ocean Alliance and the Pan-China Ocean Carbon Alliance

Isolation and characterization of a marine algicidal bacterium against the toxic dinoflagellate Alexandrium tamarense

Interactions between bacteria and harmful algal bloom (HAB) species have been acknowledged as an important factor regulating both the population dynamics and toxin production of these algae. A marine bacterium SP48 with algicidal activity to the toxic dinoflagellate, Alexandrium tamarense, was isolated from the Donghai Sea area, China. Genetic identification was achieved by polymerase chain reaction amplification and sequence analysis of 16S rDNA. Sequence analysis showed that the most probable affiliation of SP48 was to the gamma-proteobacteria subclass and the genus Pseudoalteromonas. Bacterial isolate SP48 showed algicidal activity through an indirect attack. Additional organic nutrients but not algal-derived DOM was necessary for the synthesis of unidentified algicidal compounds but P-glucosidase was not responsible for the algicidal activity. The algicidal compounds produced by bacterium SP48 were heat tolerant, unstable in acidic condition and could be easily synthesized regardless of variation in temperature, salinity or initial pH for bacterial growth. This is the first report of a bacterium algicidal to the toxic dinoflagellate A. tamarense and the findings increase our knowledge of bacterial-algal interactions and the role of bacteria during the population dynamics of HABs. (C) 2007 Published by Elsevier B.V

Effects of CO2 Enrichment on Growth and Development of Impatiens hawkeri

The effects of CO2 enrichment on growth and development of Impatiens hawkeri, an important greenhouse flower, were investigated for the purpose of providing scientific basis for CO2 enrichment to this species in greenhouse. The plants were grown in CO2-controlled growth chambers with 380 (the control) and 760 (CO2 enrichment) μmol⋅mol-1, respectively. The changes in morphology, physiology, biochemistry, and leaf ultrastructure of Impatiens were examined. Results showed that CO2 enrichment increased flower number and relative leaf area compared with the control. In addition, CO2 enrichment significantly enhanced photosynthetic rate, contents of soluble sugars and starch, activities of peroxidase (POD), superoxide dismutase (SOD), and ascorbate peroxidase (APX), but reduced chlorophyll content and malondialdehyde (MDA) content. Furthermore, significant changes in chloroplast ultrastructure were observed at CO2 enrichment: an increased number of starch grains with an expanded size, and an increased ratio of stroma thylakoid to grana thylakoid. These results suggest that CO2 enrichment had positive effects on Impatiens, that is, it can improve the visual value, promote growth and development, and enhance antioxidant capacity

MiR-212-5p Suppresses the Epithelial-Mesenchymal Transition in Triple-Negative Breast Cancer by Targeting Prrx2

Background/Aims: Triple-negative breast cancer (TNBC) is the most aggressive breast cancer subtype. Our study investigated the functional role of miR-212-5p in TNBC. Methods: Realtime PCR was used to quantify miR-212-5p expression levels in 30 paired TNBC samples and adjacent normal tissues. Wound healing and Transwell assays were used to evaluate the effects of miR-212-5p expression on the invasiveness of TNBC cells. Luciferase reporter and Western blot assays were used to verify whether the mRNA encoding Prrx2 is a major target of miR-212-5p. Results: MiR-212-5p was downregulated in TNBC, and its expression levels were related to tumor size, lymph node status and vascular invasion in breast cancer. We also observed that the miR-212-5p expression level was significantly correlated with a better prognosis in TNBC. Ectopic expression of miR-212-5p induced upregulation of E-cadherin expression and downregulation of vimentin expression. The expression of miR212-5p also suppressed the migration and invasion capacity of mesenchymal-like cancer cells accompanied by a morphological shift towards the epithelial phenotype. Moreover, our study observed that miR-212-5p overexpression significantly suppressed Prrx2 by targeting its 3’-untranslated region (3’-UTR) region, and Prrx2 overexpression partially abrogated miR-212-5p-mediated suppression. Conclusions: Our study demonstrated that miR-212-5p inhibits TNBC from acquiring the EMT phenotype by downregulating Prrx2, thereby inhibiting cell migration and invasion during cancer progression

Mamefiella alba gen nov, sp nov, a marine bacterium of the Roseobacter clade in the order Rhodobacterales

MOST [2007CB815900]; NSFC [40632013]; SOA [200805068]; National Infrastructure of Natural Resources for Science and Technology Program of China [2005DKA21209]; COMRA [DYXM-115-02-4-3]; Technical Innovation Project of the Ministry of Education of China [70A Gram-negative, non-motile, rod-shaped bacterial strain, JLT354-W(T), that accumulates poly-beta-hydroxybutyrate granules was isolated from the South China Sea. Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain was related to members of the genera Antarctobacter, Sagittula, Oceanicola and Loktanella; levels of similarity between strain JLT354-W(T) and members of the above genera were less than 92.0%. The predominant fatty acid of strain JLT354-W(T) was C(18:1)omega 7c (83.1 %); significant amounts of C(18:0) (7.9%) and C(12:1) 3-OH (3.7%) were also present. The predominant respiratory ubiquinone was Q-10. The DNA G+C content of strain JLT354-WT was 63.7 mol%. The isolate was distinguishable from members of the order Rhodobacterales based on phenotypic and biochemical characteristics. On the basis of the taxonomic data presented, strain JLT354-W(T) is considered to represent a novel species of a new genus, for which the name Mamefiella alba gen. nov., sp. nov. is proposed. The type strain of Mameliella alba is JLT354-W(T) (=LMG 24665(T)=CGMCC 1.7290(T))

miR-422a inhibits cell proliferation in colorectal cancer by targeting AKT1 and MAPK1

Abstract Background miRNAs are regarded as molecular biomarkers and therapeutic targets for colorectal cancer (CRC), a series of miRNAs have been proven to involve into CRC carcinogenesis, invasion and metastasis. Aberrant miR-422a expression and its roles have been reported in some cancers. However, the function and underlying mechanism of miR-422a in the progression of CRC remain largely unknown. Methods Real-time PCR were used to quantify miR-422a expression in CRC tissues. Both vivo and vitro functional assays showed miR-422a inhibits CRC cell proliferation. Target prediction program (miRBase) and luciferase reporter assays were conducted to confirm the target genes AKT1 and MAPK1 of miR-422a. Specimens from 50 patients with CRC were analyzed for the correlation between the expression of miR-422a and the expression of the target genes AKT1 and MAPK1 by real-time PCR. Results MiR-422a was down‑regulated in CRC tissues and cell lines. Ectopic expression of miR-422a inhibited cell proliferation and tumor growth ability; inhibition of endogenous miR-422a, by contrast, promoted cell proliferation and tumor growth ability of CRC cells. MiR-422a directly targets 3′-UTR of the AKT1 and MAPK1, down-regulation of miR-422a led to the activation of Raf/MEK/ERK and PI3K/AKT signaling pathways to promote cell proliferation in CRC. In addition, miR-422a expression was negatively correlated with the expressions of AKT1 and MAPK1 in CRC tissues. Conclusion miR-422a inhibits cell proliferation in colorectal cancer by targeting AKT1 and MAPK1