The Role of Chaos in One-Dimensional Heat Conductivity

We investigate the heat conduction in a quasi 1-D gas model with various degree of chaos. Our calculations indicate that the heat conductivity $\kappa$ is independent of system size when the chaos of the channel is strong enough. The different diffusion behaviors for the cases of chaotic and non-chaotic channels are also studied. The numerical results of divergent exponent $\alpha$ of heat conduction and diffusion exponent $\beta$ are in consistent with the formula $\alpha=2-2/\beta$. We explore the temperature profiles numerically and analytically, which show that the temperature jump is primarily attributed to superdiffusion for both non-chaotic and chaotic cases, and for the latter case of superdiffusion the finite-size affects the value of $\beta$ remarkably.Comment: 6 pages, 7 figure

Medium effects on the selection of sequences folding into stable proteins in a simple model

We study the medium effects on the selection of sequences in protein folding by taking account of the surface potential in HP-model. Our analysis on the proportion of H and P monomers in the sequences gives a direct interpretation that the lowly designable structures possess small average gap. The numerical calculation by means of our model exhibits that the surface potential enhances the average gap of highly designable structures. It also shows that a most stable structure may be no longer the most stable one if the medium parameters changed.Comment: 4 pages, 4 figure

Epidemiological Assessment of Risk Factors Associated with Bovine Ephemeral Fever Virus Exposure among Sheep and Goats in South Korea

Background: Bovine ephemeral fever virus (BEFV) is an arthropod-borne virus classified as a type species of the genus Ephemerovirus, family Rhabdoviridae. BEFV is the causative agent of bovine ephemeral fever (BEF), a non-contagious disease of acute febrile clinical signs in cattle and water buffalo. Some species might act as reservoir hosts, and antibodies to BEFV have also been found in asymptomatic sheep, goats, pigs, and many wild animals. This study aimed to conduct a retrospective cross-sectional serological screening in South Korea to address BEFV seroprevalence and identify risk factors for becoming seropositive for the virus in sheep and goats. Materials, Methods & Results: The apparent prevalence rates were considered to be the animal-level prevalence, defined as the proportion of serum neutralization test (SNT)-positive animals out of the total number of animals tested in the study area, and flock prevalence was defined as the proportion of SNT-positive flocks out of the total number of tested flocks in the area. A flock was classified as positive if at least one animal was SNT-positive. At the national level in 2011, 28 of 177 flocks (15.8%; 95% CI, 11.2−21.9%) and 71 of 498 heads (14.3%, 95% CI: 11.5-17.6%) that were analyzed showed serum neutralizing antibodies against BEFV. Our results revealed that age class, vector control, and geographic location affected seroprevalence to differing extents. In the univariate analysis, older age was a significant risk factor (OR, 2.327; 95% CI, 1.147-4.721; P = 0.017 in adults). The management risk factor attributes showed that preventive measures, such as routine application of insecticides in farms, decreased the odds of seropositivity for BEFV (OR, 0.514; 95% CI, 0.267-0.991; P = 0.044). Vector control was a significant protective factor, while animal species, flock size, and flock structure were not significantly associated. Differences in seroprevalence between variations in the presence of ruminant farms, lakes, or rice paddies within a 1-km radius or type of land use were not statistically significant (P > 0.05). We observed a significant difference in the individual likelihood of being positive in the southern provinces with respect to that in the northern provinces (OR, 2.166; 95% CI, 1.228-3.824; P = 0.007). Differences in seroprevalence between variations in the eastern and western regions were not statistically significant (P > 0.05). The retrospective study results showed that the virus was widely distributed in sheep and goats in South Korea, with seropositive rates ranging from 7.8% to 19.7% between 2003 and 2008.Discussion: This is the first report of circulating antibodies against BEFV in sheep and goats in South Korea. The serological prevalence of BEFV infection in sheep and goats was significantly different between different age cohorts, vector control, and geographical locations: it was higher in the older group and the southern and western regions of South Korea. Determination of seropositivity rates often leads to an understanding of virus circulation dynamics and is useful in the formulation of disease control measures. Our results demonstrated that vector control was a significant protective factor; therefore, the summer control of vectors could be better implemented in provinces with elevated seropositivity rates. The results of this seroprevalence study may serve as a basis for future epidemiological studies on BEFV infection in South Korea

The role of secondary structure in protein structure selection

Abstract. The presence of highly regular secondary structure motifs in protein structure is a fascinating area of study. The secondary structures play important roles in protein structure and protein folding. We investigate the folding properties of protein by introducing the effect of secondary structure elements. We observed the emergence of several structures with both large average energy gap and high designability. The dynamic study indicates that these structures are more foldable than those without the effect of secondary structures

Electron Parallel Transport for Arbitrary Collisionality

Integral (nonlocal) closures [J.-Y. Ji and E. D. Held, Phys. Plasmas 21, 122116 (2014)] are combined with the momentum balance equation to derive electron parallel transport relations. For a single harmonic fluctuation, the relations take the same form as the classical Spitzer theory (with possible additional terms): the electric current and heat flux densities are connected to the modified electric field and temperature gradient by transport coefficients. In contrast to the classical theory, the dimensionless coefficients depend on the collisionality quantified by a Knudsen number, the ratio of the collision length to the angular wavelength. The key difference comes from the proper treatment of the viscosity and friction terms in the momentum balance equation, accurately reflecting the free streaming and collision terms in the kinetic equation. For an arbitrary fluctuation, the transport relations may be expressed by a Fourier series or transform. For low collisionality, the electric resistivity can be significantly larger than that of classical theory and may predict the correct timescale for fast magnetic reconnection