Bús düledékeiden. Hozzászólás Halmai Tamás ,Műveltség nélküli nemzedékek?’ című írásához

Expanded data presented in Supporting Information F is available here in text file format: “SIF2.Data.txt” (Supporting Information F2)

Weis PLOS ONE 2016 Data

These data were collected from a microcosm experiment conducted at Yale University in April 2013. The data are presented in a Microsoft Excel format with four worksheets; one metadata worksheet and three data worksheets. The main data worksheet includes count data across sampling dates for phytoplankton and zooplankton and the final biovolume and biomass density estimates used in the published report. The other two data worksheets contain the raw data on individual phytoplankter and zooplankter linear measurements used to calculate average biovolume and biomass

ANOVA results of linear mixed effect models of total phytoplankton biomass as fixed effects of time and phytoplankton species richness at the regional scale and within the no- and with-<i>Daphnia</i> patches.

<p>ANOVA results of linear mixed effect models of total phytoplankton biomass as fixed effects of time and phytoplankton species richness at the regional scale and within the no- and with-<i>Daphnia</i> patches.</p

I used five freshwater phytoplankton species common in North American lakes in this experiment.

<p>Species represented two major phylogenetic divisions, several common growth forms, and varied in their ability to remain in the water column. Under the experimental conditions species varied in average cell biomass and edibility to the zooplankton herbivore (<i>Daphnia pulicaria</i>).</p

Phytoplankton Average Biomass and Yield Response Through Time.

<p>Top panels show average phytoplankton biomass density (± standard error) by phytoplankton species richness and monoculture treatments at the regional scale where biomass is summed across patches (A), in no-<i>Daphnia</i> patches (B), and in with-<i>Daphnia</i> patches (C). Colored shapes show phytoplankton monocultures; yellow diamonds—Asterionella (Ast), blue circles—Chlamydomonas (Chl), orange hexagons—Cyclotella (Cyc), green upside-down triangles—Mougeotia (Mou), red triangles—Navicula (Nav). Squares show species-rich polycultures; white squares– 3-species polycultures (3-Spp), black squares– 5-species polycultures (5-Spp). Middle panels show average yield response metric (D ± standard error) in the 3-species (white squares) and 5-species polycultures (black squares) at the regional scale (D), in no-<i>Daphnia</i> patches (E), and in with-<i>Daphnia</i> patches (F). Bottom panels show average percent composition by biomass of each phytoplankton species in the 5-species polycultures across sampling dates at the regional scale (G), in no-<i>Daphnia</i> patches (H), and in with-<i>Daphnia</i> patches (I).</p

Final <i>Daphnia</i> Biomass.

<p>Average <i>Daphnia</i> biomass on the final day of the experiment (DOE 22) by phytoplankton treatment. Colored shapes show phytoplankton monocultures; yellow diamonds–<i>Asterionella</i> (Ast), blue circles–<i>Chlamydomonas</i> (Chl), orange hexagons–<i>Cyclotella</i> (Cyc), green upside-down triangles–<i>Mougeotia</i> (Mou), red triangles–<i>Navicula</i> (Nav). Squares show species-rich polycultures; white squares– 3-species polycultures (3-Spp), black squares– 5-species polycultures (5-Spp).</p

ANOVA results of the linear mixed effect model of the polyculture yield metric (<i>D</i>) as a function of time, phytoplankton species richness, and the presence of <i>Daphnia</i>.

<p>ANOVA results of the linear mixed effect model of the polyculture yield metric (<i>D</i>) as a function of time, phytoplankton species richness, and the presence of <i>Daphnia</i>.</p

Flow Cytometry Data

Files containing all raw flow cytometry data for individual adult C. rubecula are in .fcs format. For individual fcs files the middle value of each file name references an individual reported in “Weis et al. Evolution Cotesia.xlsx” above. For instance, “samples_C25_001.fcs” contains the data for individual C25 on the field pupae worksheet, “samples_N4a3_020.fcs” contains data for individual N4.a.3 on the cross pupae worksheet

Figures 2 and 3 Simulation Data

Simulated data presented in Figures 2, and 3 is available here in Microsoft Excel format, “Weis et al. Evolution Fig2 Fig3.xlsx”, and is accompanied with a metadata description on the first worksheet

Figure 3 Simulation Code

Note that this code is set for the expanded parameter space explored in Supplementary Information F. Also note dependencies in the R code available through the R CRAN; doParallel, foreach, and doRNG