12,644 research outputs found

    Application of processed organic municipal solid waste on agricultural land - a scenario analysis

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    Source separation, composting and anaerobic digestion, with associated land application, are increasingly being considered as alternative waste management strategies to landfilling and incineration of municipal solid waste (MSW). Environmental life cycle assessments are a useful tool in political decision-making about waste management strategies. However, due to the diversity of processed organic MSW and the situations in which it can be applied, the environmental impacts of land application are very hard to determine by experimental means. In the current study, we used the agroecosystem model Daisy to simulate a range of different scenarios representing different geographical areas, farm and soil types under Danish conditions and legislation. Generally, the application of processed organic MSW resulted in increased emissions compared with the corresponding standard scenarios, but with large differences between scenarios. Emission coefficients for nitrogen leaching to the groundwater ranged from 0.03 to 0.87, while those for nitrogen lost to surface waters through tile drains ranged from 0 to 0.30. Emission coefficients for N2O formation ranged from 0.013 to 0.022 and for ammonia volatilization from 0.016 to 0.11. These estimates are within reasonable range of observed values under similar conditions. Furthermore, a sensitivity analysis showed that the estimates were not very sensitive to the mineralization dynamics of the processed organic MSW. The results show that agroecosystem models can be powerful tools to estimate the environmental impacts of land application of processed MSW under different conditions. Despite this, agroecosystem models have only been used to a very limited degree for this purpose

    Polygons on a Rotating Fluid Surface

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    We report a novel and spectacular instability of a fluid surface in a rotating system. In a flow driven by rotating the bottom plate of a partially filled, stationary cylindrical container, the shape of the free surface can spontaneously break the axial symmetry and assume the form of a polygon rotating rigidly with a speed different from that of the plate. With water we have observed polygons with up to 6 corners. It has been known for many years that such flows are prone to symmetry breaking, but apparently the polygonal surface shapes have never been observed. The creation of rotating internal waves in a similar setup was observed for much lower rotation rates, where the free surface remains essentially flat. We speculate that the instability is caused by the strong azimuthal shear due to the stationary walls and that it is triggered by minute wobbling of the rotating plate. The slight asymmetry induces a tendency for mode-locking between the plate and the polygon, where the polygon rotates by one corner for each complete rotation of the plate

    Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics

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    We present the ProCS method for the rapid and accurate prediction of protein backbone amide proton chemical shifts - sensitive probes of the geometry of key hydrogen bonds that determine protein structure. ProCS is parameterized against quantum mechanical (QM) calculations and reproduces high level QM results obtained for a small protein with an RMSD of 0.25 ppm (r = 0.94). ProCS is interfaced with the PHAISTOS protein simulation program and is used to infer statistical protein ensembles that reflect experimentally measured amide proton chemical shift values. Such chemical shift-based structural refinements, starting from high-resolution X-ray structures of Protein G, ubiquitin, and SMN Tudor Domain, result in average chemical shifts, hydrogen bond geometries, and trans-hydrogen bond (h3JNC') spin-spin coupling constants that are in excellent agreement with experiment. We show that the structural sensitivity of the QM-based amide proton chemical shift predictions is needed to refine protein structures to this agreement. The ProCS method thus offers a powerful new tool for refining the structures of hydrogen bonding networks to high accuracy with many potential applications such as protein flexibility in ligand binding.Comment: PLOS ONE accepted, Nov 201

    General Purpose Segmentation for Microorganisms in Microscopy Images

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    Age-related differences in adaptation during childhood: The influences of muscular power production and segmental energy flow caused by muscles

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    Acquisition of skillfulness is not only characterized by a task-appropriate application of muscular forces but also by the ability to adapt performance to changing task demands. Previous research suggests that there is a different developmental schedule for adaptation at the kinematic compared to the neuro-muscular level. The purpose of this study was to determine how age-related differences in neuro-muscular organization affect the mechanical construction of pedaling at different levels of the task. By quantifying the flow of segmental energy caused by muscles, we determined the muscular synergies that construct the movement outcome across movement speeds. Younger children (5-7 years; n = 11), older children (8-10 years; n = 8), and adults (22-31 years; n = 8) rode a stationary ergometer at five discrete cadences (60, 75, 90, 105, and 120 rpm) at 10% of their individually predicted peak power output. Using a forward dynamics simulation, we determined the muscular contributions to crank power, as well as muscular power delivered to the crank directly and indirectly (through energy absorption and transfer) during the downstroke and the upstroke of the crank cycle. We found significant age × cadence interactions for (1) peak muscular power at the hip joint [Wilks' Lambda = 0.441, F(8,42) = 2.65, p = 0.019] indicating that at high movement speeds children produced less peak power at the hip than adults, (2) muscular power delivered to the crank during the downstroke and the upstroke of the crank cycle [Wilks' Lambda = 0.399, F(8,42) = 3.07, p = 0.009] indicating that children delivered a greater proportion of the power to the crank during the upstroke when compared to adults, (3) hip power contribution to limb power [Wilks' Lambda = 0.454, F(8,42) = 2.54, p = 0.023] indicating a cadence-dependence of age-related differences in the muscular synergy between hip extensors and plantarflexors. The results demonstrate that in spite of a successful performance, children construct the task of pedaling differently when compared to adults, especially when they are pushed to their performance limits. The weaker synergy between hip extensors and plantarflexors suggests that a lack of inter-muscular coordination, rather than muscular power production per se, is a factor that limits children's performance ranges

    Editorial: Ecology and behaviour of free-ranging animals studied by advanced data-logging and tracking techniques

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    © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Wassmer, T., Jensen, F. H., Fahlman, A., & Murray, D. L. Editorial: Ecology and behaviour of free-ranging animals studied by advanced data-logging and tracking techniques. Frontiers in Ecology and Evolution, 8, (2020): 113, doi:10.3389/fevo.2020.00113.Many details of the behavior, life history and eco-physiology of animals, even among intensively-studied species, remain unknown. Direct observation is a laborious process only amenable for accessible and non-cryptic species, whereas traditional radio telemetry does not directly provide information on the diversity and complexity of animal physiology and behavior. Further, both methods are laborious and/or expensive, and may lead to biased data when physiology and/or behaviors are altered by marking or tracking (Boyer-Ontl and Pruetz, 2014; Nowak et al., 2014; Welch et al., 2018; see also Le Grand et al.). Ultimately, these methods provide only a fragmentary overview of animal behavior patterns during periods when individuals can be readily detected and surveyed while leaving activities during other times obscured. However, the ongoing miniaturization, sensor development, and increased affordability of data logging and advanced telemetric devices offers the potential for continuous and intensive data collection, thereby potentially allowing researchers to more rigorously investigate both physiology and behavior of animals that are difficult to study using traditional observational methods. Owing to these new technologies, we are at the cusp of a truly revolutionary opportunity to address important and longstanding knowledge gaps in animal eco-physiology. To that end, the special section entitled Ecology and Behaviour of Free-Ranging Animals Studied by Advanced Data-Logging and Tracking Techniques includes 22 papers that report on and quantify otherwise hidden aspects of the biology of a variety of mammals, birds, and even invertebrates, across diverse environments including land, water, and air. The highlighted studies focus on fields ranging from basic animal behavior and ecology to eco-physiology; several papers adopt an integrative approach, providing a rather comprehensive understanding of individual time budgets and their implications. Ultimately and collectively, these contributions serve as testament to the drastic improvement in the level of ecological inference that can be derived from research studies involving the use of data-logging and tracking devices that are currently available

    Contributions to HiLiftPW-3 Using Structured, Overset Grid Methods

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    The High-Lift Common Research Model (HL-CRM) and the JAXA Standard Model (JSM) were analyzed computationally using both the OVERFLOW and LAVA codes for the third AIAA High-Lift Prediction Workshop. Geometry descriptions and the test cases simulated are described. With the HL-CRM, the effects of surface smoothness during grid projection and the effect of partially sealing a flap gap were studied. Grid refinement studies were performed at two angles of attack using both codes. For the JSM, simulations were performed with and without the nacelle/pylon. Without the nacelle/pylon, evidence of multiple solutions was observed when a quadratic constitutive relation is used in the turbulence modeling; however, using time-accurate simulation seemed to alleviate this issue. With the nacelle/pylon, no evidence of multiple solutions was observed. Laminar-turbulent transition modeling was applied to both JSM configuration, and had an overall favorable impact on the lift predictions

    Contamination from magnetic starting materials in flux-grown single crystals of RFeAsO superconductors

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    While the flux growth often provides the best method for obtaining single crystals of new-novel materials, the process is prone to producing crystals with trapped second-phase inclusions. In the case of NdFeAsO single crystals grown out of NaAs flux under ambient pressure, some crystals show a lambda anomaly in the specific heat curve at ~12 K. This anomaly is missing in other crystals from the same batch. We show that the lambda anomaly at 12 K is from residual NdAs starting material which is mainly on the edges of the crystals. The isothermal magnetization of LaFeAsO at 300 K clearly illustrates the effect of ferromagnetic impurities on the magnetic properties of LaFeAsO crystals
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