Vascular injury from an arterial closure device

onographic examinations are commonly used to assess groin access sites for complications after endovascular procedures. Along with a rise in the number of endovascular procedures, there has also been increased use of percutaneous arterial closure devices, which facilitate immediate hemostasis and earlier patient mobilization.1,2 Here we report the sonographic appearance of an injury related to the deployment of an arterial closure device

Mineral Resource Assessment. Big Bend RanchState Natural Area, Presidio and Brewster Counties, Texas - Final Report

The Big Bend Ranch State Natural Area has a diverse geology reflecting nearly 600 million years of geologic evolution. Major geologic events include (1) deposition of elastic sedimentary rocks during the Paleozoic and their deformation (folding and faulting) at the end of the Paleozoic; (2) deposition of limestone and elastic rocks during the Cretaceous and their deformation during the early Tertiary; (3) intense extrusive and intrusive igneous activity during the middle Tertiary; and (4) major normal faulting during the late Tertiary. Almost all mineral potential of the area is associated with mid-Tertiary igneous activity. The only significant mineral production within the Ranch area was from the Fresno Mine in the western part of the Terlingua mercury district, one of the largest mining districts in Texas. This mine produced approximately 3500 flasks of mercury, mostly during World War II. Other production was minor and included some additional mercury from localities near the Fresno Mine, as well as silver-lead ore containing minor gold from a small mine in the Solitario.Bureau of Economic Geolog

Discerning Emotions in Texts

We present an empirically verified model of discernable emotions, Watson and Tellegen’s Circumplex Theory of Affect from social and personality psychology, and suggest its usefulness in NLP as a potential model for an automation of an eight-fold categorization of emotions in written English texts. We developed a data collection tool based on the model, collected 287 responses from 110 non-expert informants based on 50 emotional excerpts (min=12, max=348, average=86 words), and analyzed the inter-coder agreement per category and per strength of ratings per sub-category. The respondents achieved an average 70.7% agreement in the most commonly identified emotion categories per text. The categories of high positive affect and pleasantness were most common in our data. Within those categories, the affective terms “enthusiastic”, “active”, “excited”, “pleased”, and “satisfied” had the most consistent ratings of strength of presence in the texts. The textual clues the respondents chose had comparable length and similar key words. Watson and Tellegen’s model appears to be usable as a guide for development of an NLP algorithm for automated identification of emotion in English texts, and the non-expert informants (with college degree and higher) provided sufficient information for future creation of a gold standard of clues per category

The solution structure of the N-terminal domain of hepatocyte growth factor reveals a potential heparin-binding site

AbstractBackground: Hepatocyte growth factor (HGF) is a multipotent growth factor that transduces a wide range of biological signals, including mitogenesis, motogenesis, and morphogenesis. The N-terminal (N) domain of HGF, containing a hairpin-loop region, is important for receptor binding and the potent biological activities of HGF. The N domain is also the primary binding site for heparin or heparan sulfate, which enhances receptor/ligand oligomerization and modulates receptor-dependent mitogenesis. The rational design of artificial modulators of HGF signaling requires a detailed understanding of the structures of HGF and its receptor, as well as the role of heparin proteoglycan; this study represents the first step towards that goal.Results: We report here a high-resolution solution structure of the N domain of HGF. This first structure of HGF reveals a novel folding topology with a distinct pattern of charge distribution and indicates a possible heparin-binding site.Conclusions: The hairpin-loop region of the N domain plays a major role in stabilizing the structure and contributes to a putative heparin-binding site, which explains why it is required for biological functions. These results suggest several basic and/or polar residues that may be important for use in further mutational studies of heparin binding

Generating Entangled Two-Photon States with Coincident Frequencies

It is shown that parametric downconversion, with a short-duration pump pulse and a long nonlinear crystal that is appropriately phase matched, can produce a frequency-entangled biphoton state whose individual photons are coincident in frequency. Quantum interference experiments which distinguish this state from the familiar time-coincident biphoton state are described.Comment: Revised version (a typo was corrected) as published on PR

Medulloblastoma has a global impact on health related quality of life: Findings from an international cohort.

BackgroundUnderstanding the global impact of medulloblastoma on health related quality of life (HRQL) is critical to characterizing the broad impact of this disease and realizing the benefits of modern treatments. We evaluated HRQL in an international cohort of pediatric medulloblastoma patients.MethodsSeventy-six patients were selected from 10 sites across North America, Europe, and Asia, who participated in the Medulloblastoma Advanced Genomics International Consortium (MAGIC). The Health Utilities Index (HUI) was administered to patients and/or parents at each site. Responses were used to determine overall HRQL and attributes (ie specific subdomains). The impact of various demographic and medical variables on HRQL was considered-including molecular subgroup.ResultsThe majority of patients reported having moderate or severe overall burden of morbidity for both the HUI2 and HUI3 (HUI2 = 60%; HUI3 = 72.1%) when proxy-assessed. Self-care in the HUI2 was rated as higher (ie better outcome) for patients from Western versus Eastern sites, P = .02. Patients with nonmetastatic status had higher values (ie better outcomes) for the HUI3 hearing, HUI3 pain, and HUI2 pain, all P < .05. Patients treated with a gross total resection also had better outcomes for the HUI3 hearing (P = .04). However, those who underwent a gross total resection reported having worse outcomes on the HUI3 vision (P = .02). No differences in HRQL were evident as a function of subgroup.ConclusionsBy examining an international sample of survivors, we characterized the worldwide impact of medulloblastoma. This is a critical first step in developing global standards for evaluating long-term outcomes

Identification and Dynamics of a Heparin-Binding Site in Hepatocyte Growth Factor †

Hepatocyte growth factor (HGF) is a heparin-binding, multipotent growth factor that transduces a wide range of biological signals, including mitogenesis, motogenesis, and morphogenesis. Heparin or closely related heparan sulfate has profound effects on HGF signaling. A heparin-binding site in the N-terminal (N) domain of HGF was proposed on the basis of the clustering of surface positive charges [Zhou, H., Mazzulla, M. J., Kaufman, J. D., Stahl, S. J., Wingfield, P. T., Rubin, J. S., Bottaro, D. P., and Byrd, R. A. (1998) Structure 6, 109-116]. In the present study, we confirmed this binding site in a heparin titration experiment monitored by nuclear magnetic resonance spectroscopy, and we estimated the apparent dissociation constant (K(d)) of the heparin-protein complex by NMR and fluorescence techniques. The primary heparin-binding site is composed of Lys60, Lys62, and Arg73, with additional contributions from the adjacent Arg76, Lys78, and N-terminal basic residues. The K(d) of binding is in the micromolar range. A heparin disaccharide analogue, sucrose octasulfate, binds with similar affinity to the N domain and to a naturally occurring HGF isoform, NK1, at nearly the same region as in heparin binding. (15)N relaxation data indicate structural flexibility on a microsecond-to-millisecond time scale around the primary binding site in the N domain. This flexibility appears to be dramatically reduced by ligand binding. On the basis of the NK1 crystal structure, we propose a model in which heparin binds to the two primary binding sites and the N-terminal regions of the N domains and stabilizes an NK1 dimer

Transcript-indexed ATAC-seq for precision immune profiling.

T cells create vast amounts of diversity in the genes that encode their T cell receptors (TCRs), which enables individual clones to recognize specific peptide-major histocompatibility complex (MHC) ligands. Here we combined sequencing of the TCR-encoding genes with assay for transposase-accessible chromatin with sequencing (ATAC-seq) analysis at the single-cell level to provide information on the TCR specificity and epigenomic state of individual T cells. By using this approach, termed transcript-indexed ATAC-seq (T-ATAC-seq), we identified epigenomic signatures in immortalized leukemic T cells, primary human T cells from healthy volunteers and primary leukemic T cells from patient samples. In peripheral blood CD4+ T cells from healthy individuals, we identified cis and trans regulators of naive and memory T cell states and found substantial heterogeneity in surface-marker-defined T cell populations. In patients with a leukemic form of cutaneous T cell lymphoma, T-ATAC-seq enabled identification of leukemic and nonleukemic regulatory pathways in T cells from the same individual by allowing separation of the signals that arose from the malignant clone from the background T cell noise. Thus, T-ATAC-seq is a new tool that enables analysis of epigenomic landscapes in clonal T cells and should be valuable for studies of T cell malignancy, immunity and immunotherapy