336 research outputs found
Auditory processing in individuals with auditory neuropathy
BACKGROUND: Auditory neuropathy is a disorder characterized by no or severely impaired auditory brainstem responses in presence of normal otoacoustic emissions and/or cochlear microphonics. Speech perception abilities in these individuals are disproportionate to their hearing sensitivity and reported to be dependent on cortical evoked potentials and temporal processing abilities. The disproportionate loss of auditory percept in presence of normal cochlear function is suggestive of impairment of auditory neural synchrony. METHODS: We studied the auditory evoked potentials and psychophysical abilities in 14 adults with auditory neuropathy to characterize their perceptual capabilities. Psychophysical tests included measurement of open set speech identification scores, just noticeable difference for transition duration of syllable /da/ and temporal modulation transfer function. Auditory evoked potentials measures were, recording of P(1)/N(1), P(2)/N(2 )complex and mismatch negativity (MMN). RESULTS: Results revealed a significant correlation between temporal processing deficits and speech perception abilities. In majority of individuals with auditory neuropathy P(1)/N(1), P(2)/N(2 )complex and mismatch negativity could be elicited with normal amplitude and latency. None of the measured evoked potential parameters correlated with the speech perception scores. Many of the subjects with auditory neuropathy showed normal MMN even though they could not discriminate the stimulus contrast behaviorally. CONCLUSION: Conclusions drawn from the study are 1. Individuals with auditory neuropathy have severely affected temporal processing. 2. The presence of MMN may not be directly linked to presence of behavioral discrimination and to speech perception capabilities at least in adults with auditory neuropathy
Thermomechanical effect in cholesteric liquid crystals
We discuss some possible experimental geometries for studying Leslie's thermomechanical effect in cholesteric liquid crystals. The discussion includes the effect of a temperature gradient (i) along and (ii) perpendicular to the helical axis. The feasibility of observing the effect and of extracting the thermomechanical coefficients is examined
Evolving training sets for improved transfer learning in brain computer interfaces
A new proof-of-concept method for optimising the performance of Brain Computer Interfaces (BCI) while minimising the quantity of required training data is introduced. This is achieved by using an evolutionary approach to rearrange the distribution of training instances, prior to the construction of an Ensemble Learning Generic Information (ELGI) model. The training data from a population was optimised to emphasise generality of the models derived from it, prior to a re-combination with participant-specific data via the ELGI approach, and training of classifiers. Evidence is given to support the adoption of this approach in the more difficult BCI conditions: smaller training sets, and those suffering from temporal drift. This paper serves as a case study to lay the groundwork for further exploration of this approach
FIGGS: Faint Irregular Galaxies GMRT Survey - Overview, observations and first results
The Faint Irregular Galaxies GMRT Survey (FIGGS) is a Giant Metrewave Radio
Telescope (GMRT) based HI imaging survey of a systematically selected sample of
extremely faint nearby dwarf irregular galaxies. The primary goal of FIGGS is
to provide a comprehensive and statistically robust characterization of the
neutral inter-stellar medium properties of faint, gas rich dwarf galaxies. The
FIGGS galaxies represent the extremely low-mass end of the dwarf irregular
galaxies population, with a median M and median HI mass of
M, extending the baseline in mass and luminosity
space for a comparative study of galaxy properties. The HI data is supplemented
with observations at other wavelengths. In addition, distances accurate to ~
10% are available for most of the sample galaxies. This paper gives an
introduction to FIGGS, describe the GMRT observations and presents the first
results from the HI observations. From the FIGGS data we confirm the trend of
increasing HI to optical diameter ratio with decreasing optical luminosity; the
median ratio of D/D for the FIGGS sample is 2.4. Further,
on comparing our data with aperture synthesis surveys of bright spirals, we
find at best marginal evidence for a decrease in average surface density with
decreasing HI mass. To a good approximation the disks of gas rich galaxies,
ranging over 3 orders of magnitude in HI mass, can be described as being drawn
from a family with constant HI surface density.Comment: 17 pages, 14 figures. Accepted for publication in MNRA
Planar 17O NMR study of Pr_yY_{1-y}Ba_2Cu_3O_{6+x}
We report the planar ^{17}O NMR shift in Pr substituted YBa_{2}Cu_{3}O_{6+x},
which at x=1 exhibits a characteristic pseudogap temperature dependence,
confirming that Pr reduces the concentration of mobile holes in the CuO_{2}
planes. Our estimate of the rate of this counterdoping effect, obtained by
comparison with the shift in pure samples with reduced oxygen content, is found
insufficient to explain the observed reduction of T_c. From the temperature
dependent magnetic broadening of the ^{17}O NMR we conclude that the Pr moment
and the local magnetic defect induced in the CuO_2 planes produce a long range
spin polarization in the planes, which is likely associated with the extra
reduction of T_c. We find a qualitatively different behaviour in the oxygen
depleted Pr_yY_{1-y}Ba_2Cu_3O_{6.6}, i.e. the suppression of T is nearly
the same, but the magnetic broadening of the ^{17}O NMR appears weaker. This
difference may signal a weaker coupling of the Pr to the planes in the
underdoped compound, which might be linked with the larger Pr to CuO_2 plane
distance, and correspondingly weaker hybridization.Comment: 8 pages, 9 figures, accepted in Phys Rev
GMRT Observations of Interstellar Clouds in the 21cm line of Atomic Hydrogen
Nearby interstellar clouds with high (|v| >/= 10 km/s) random velocities
although easily detected in NaI and CaII lines have hitherto not been detected
(in emission or absorption) in the HI 21cm line. We describe here deep Giant
Metrewave Radio Telescope (GMRT) HI absorption observations toward radio
sources with small angular separation from bright O and B stars whose spectra
reveal the presence of intervening high random velocity CaII absorbing clouds.
In 5 out of the 14 directions searched we detect HI 21cm absorption features
from these clouds. The mean optical depth of these detections is ~ 0.09 and
FWHM is ~ 10 km/s, consistent with absorption arising from CNM clouds.Comment: 16 pages, 6 figures (included), Accepted for publication in Journal
of Astrophysics & Astronomy, uses jaa.st
Electroporation-Induced Electrosensitization
BACKGROUND: Electroporation is a method of disrupting the integrity of cell membrane by electric pulses (EPs). Electrical modeling is widely employed to explain and study electroporation, but even most advanced models show limited predictive power. No studies have accounted for the biological consequences of electroporation as a factor that alters the cell's susceptibility to forthcoming EPs. METHODOLOGY/PRINCIPAL FINDINGS: We focused first on the role of EP rate for membrane permeabilization and lethal effects in mammalian cells. The rate was varied from 0.001 to 2,000 Hz while keeping other parameters constant (2 to 3,750 pulses of 60-ns to 9-µs duration, 1.8 to 13.3 kV/cm). The efficiency of all EP treatments was minimal at high rates and started to increase gradually when the rate decreased below a certain value. Although this value ranged widely (0.1-500 Hz), it always corresponded to the overall treatment duration near 10 s. We further found that longer exposures were more efficient irrespective of the EP rate, and that splitting a high-rate EP train in two fractions with 1-5 min delay enhanced the effects severalfold. CONCLUSIONS/SIGNIFICANCE: For varied experimental conditions, EPs triggered a delayed and gradual sensitization to EPs. When a portion of a multi-pulse exposure was delivered to already sensitized cells, the overall effect markedly increased. Because of the sensitization, the lethality in EP-treated cells could be increased from 0 to 90% simply by increasing the exposure duration, or the exposure dose could be reduced twofold without reducing the effect. Many applications of electroporation can benefit from accounting for sensitization, by organizing the exposure either to maximize sensitization (e.g., for sterilization) or, for other applications, to completely or partially avoid it. In particular, harmful side effects of electroporation-based therapies (electrochemotherapy, gene therapies, tumor ablation) include convulsions, pain, heart fibrillation, and thermal damage. Sensitization can potentially be employed to reduce these side effects while preserving or increasing therapeutic efficiency
Mechanisms of Loss of Functions of Human Angiogenin Variants Implicated in Amyotrophic Lateral Sclerosis
Background: Mutations in the coding region of angiogenin (ANG) gene have been found in patients suffering from Amyotrophic Lateral Sclerosis (ALS). Neurodegeneration results from the loss of angiogenic ability of ANG (protein coded by ANG). In this work, we performed extensive molecular dynamics (MD) simulations of wild-type ANG and disease associated ANG variants to elucidate the mechanism behind the loss of ribonucleolytic activity and nuclear translocation activity, functions needed for angiogenesis. Methodology/Principal Findings: MD simulations were carried out to study the structural and dynamic differences in the catalytic site and nuclear localization signal residues between WT-ANG (Wild-type ANG) and six mutants. Variants K17I, S28N, P112L and V113I have confirmed association with ALS, while T195C and A238G single nucleotide polymorphisms (SNPs) encoding L35P and K60E mutants respectively, have not been associated with ALS. Our results show that loss of ribonucleolytic activity in K17I is caused by conformational switching of the catalytic residue His114 by 99u. The loss of nuclear translocation activity of S28N and P112L is caused by changes in the folding of the residues 31 RRR 33 that result in the reduction in solvent accessible surface area (SASA). Consequently, we predict that V113I will exhibit loss of angiogenic properties by loss of nuclear translocation activity and L35P by loss of both ribonucleolytic activity and nuclear translocation activity. No functional loss was inferred for K60E. The MD simulation results were supported by hydrogen bond interactio
Trafficking through COPII Stabilises Cell Polarity and Drives Secretion during Drosophila Epidermal Differentiation
BACKGROUND: The differentiation of an extracellular matrix (ECM) at the apical side of epithelial cells implies massive polarised secretion and membrane trafficking. An epithelial cell is hence engaged in coordinating secretion and cell polarity for a correct and efficient ECM formation. PRINCIPAL FINDINGS: We are studying the molecular mechanisms that Drosophila tracheal and epidermal cells deploy to form their specific apical ECM during differentiation. In this work we demonstrate that the two genetically identified factors haunted and ghost are essential for polarity maintenance, membrane topology as well as for secretion of the tracheal luminal matrix and the cuticle. We show that they code for the Drosophila COPII vesicle-coating components Sec23 and Sec24, respectively, that organise vesicle transport from the ER to the Golgi apparatus. CONCLUSION: Taken together, epithelial differentiation during Drosophila embryogenesis is a concerted action of ECM formation, plasma membrane remodelling and maintenance of cell polarity that all three rely mainly, if not absolutely, on the canonical secretory pathway from the ER over the Golgi apparatus to the plasma membrane. Our results indicate that COPII vesicles constitute a central hub for these processes
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