Variability in gene expression underlies incomplete penetrance

The phenotypic differences between individual organisms can often be ascribed to underlying genetic and environmental variation. However, even genetically identical organisms in homogeneous environments vary, indicating that randomness in developmental processes such as gene expression may also generate diversity. To examine the consequences of gene expression variability in multicellular organisms, we studied intestinal specification in the nematode Caenorhabditis elegans in which wild-type cell fate is invariant and controlled by a small transcriptional network. Mutations in elements of this network can have indeterminate effects: some mutant embryos fail to develop intestinal cells, whereas others produce intestinal precursors. By counting transcripts of the genes in this network in individual embryos, we show that the expression of an otherwise redundant gene becomes highly variable in the mutants and that this variation is subjected to a threshold, producing an ON/OFF expression pattern of the master regulatory gene of intestinal differentiation. Our results demonstrate that mutations in developmental networks can expose otherwise buffered stochastic variability in gene expression, leading to pronounced phenotypic variation.National Institutes of Health (U.S.). Pioneer AwardMathematical Sciences Postdoctoral Research Fellowships (DMS-0603392)National Institutes of Health (U.S.). Ruth L. Kirschstein National Research Service Award (5F32GM080966

Willingness to Engage in Collective Action After the Killing of an Unarmed Black Man: Differential Pathways for Black and White Individuals

This cross-sectional survey study examined the underlying psychosocial constructs of Black (n = 163) and White (n = 246) university students\u27 willingness to endorse racially motivated collective action. Consistent with the defensive motivation system model, we expected the police shooting of an unarmed Black American to activate concerns about personal safety, thereby eliciting negative affect, lack of forgiveness of the perpetrator, and motivation to engage in collective action. This path model was expected for both Black and White participants, with stronger associations among Black participants. In the full model, Black participants identified more with the victim and indicated greater personal threat, which led to (1) more negative affect and greater endorsement of collective action and (2) greater avoidance of the shooter and greater endorsement of collective action. In the Black participants model, collective action was explained by identifying with the victim and feeling personally threatened. In the White participants model, collective action was explained by three pathways stemming from identifying with the victim and personal threat, including negative affect, seeking avoidance, and seeking revenge. The results indicate different mechanisms to explain Black and White individuals\u27 motivation to endorse collective action to prevent police-involved shootings of unarmed Black Americans

Aplicação de Membranas Amnióticas na Reconstrução da Superfície Ocular Externa em Idade Pediátrica

Introdução: Vários estudos comprovam os benefícios da aplicação de membranas amnióticas na reconstrução da superfície ocular em idade adulta, pelos seus efeitos anti-inflamatorios, anti-adesivos e anti-apoptóticos. Em idade pediátrica, a reconstrução da superfície ocular carece de especial atenção e este procedimento encontra-se ainda pouco estudado. Não foi encontrado nenhum estudo especificamente dirigido à aplicação de membranas amnióticas na reconstrução da superfície ocular externa desta faixa etária, pelo que procurámos elucidá-lo. Material e métodos: Estudo retrospetivo englobando todos os doentes em idade pediátrica (7,1 anos +/- 4,17) submetidos a transplante de membrana amniótica no Centro Hospitalar de Lisboa Central entre 2008 e 2015, para reconstrução da superfície ocular externa. Entre os doentes (n=6 olhos de 6 crianças), quatro apresentavam patologia do foro neoformativo ou inflamatório e dois apresentavam queimaduras extensas da superfície ocular. Foi realizada divisão em dois grupos, com base na presença ou não de insuficiência de células limbares. Foram avaliadas características clínicas e demográficas, MAVC antes e após a cirurgia, tempo de reepitelização, amplitude de movimentos oculares antes e após a cirurgia, presença de recidiva ou complicações e resultado estético. O tempo de seguimento foi de 4 a 83 meses. Resultados: Verificaram-se sucessos completos em todos os doentes sem insuficiência limbar (50% do total de doentes), sucessos parciais em dois dos doentes com insuficiência limbar (33,3%) e um caso de falência terapêutica (16.7%). Nos doentes em que se observou recidiva, o tempo médio para esta ocorrência foi de 8,3 +/- 6,8 meses. Não se verificaram complicações em nenhum dos casos. Observou-se melhoria pós-operatória em um dos dois casos que tinham diminuição da acuidade visual pré-operatória (aumento da MAVC em 6 linhas). Verificou-se ainda uma melhoria da motilidade ocular e aspeto estético em todos os doentes com alterações prévias destes parâmetros. Conclusão: O transplante de membrana amniótica mostrou ser muito benéfico também em idade pediátrica. Pode ser realizado como tratamento isolado ou coadjuvante, sendo os resultados superiores nos casos de células limbares funcionantes. Não foi detetada maior incidência de complicações ou rejeições comparativamente ao descrito na literatura para a idade adulta.info:eu-repo/semantics/publishedVersio

Anéis de Ferrara: - 4 Anos Depois

Os anéis intraestromais, nomeadamente o anel de Ferrara, constitui uma importante opção terapêutica das doenças ectásicas da córnea, de origem não inflamatória como o Queratocone. Os autores analisaram os primeiros 30 casos operados no Serviço de Oftalmologia do CHLC relativamente à eficácia, estabilidade e segurança deste procedimento ao longo dos 4 anos. Verificaram estabilidade refractiva, diminuição queratométrica e do equivalente esférico e boa tolerância ao material implantado. Os autores concluem que esta opção terapêutica para o queratocone é segura, reversível, com resultados estáveis que permitem adiar ou evitar a queratoplastia

The Use of Stone Columns on Settlement and Liquefaction Susceptible Soils

The new Paradisus Coco Beach Resort in Rio Grande (PR) is located on an old swamp area, which has been filled with relatively clean to silty sands. The swampy deposits consists of organic silts, peat and loose fine to medium sand and silty sand. The project requires the placement of 1.0 to 1.5 meters of additional fill together with the construction of light structures. The need for the fill will trigger the development of settlements in the underlaying weak, and compressible stratum. Furthermore, the susceptibility of the loose sand to liquefaction during an earthquake was considered. This paper describes the soil improvement by means of vibro-replacement, the purpose of which was threefold: reduction in total and differential settlement, acceleration of settlements during the surcharge period and densification of the loose sand to reduce its liquefaction potential. The predesign is presented together with relevant construction details of the preliminary trial areas from which the final column diameter and grid spacing were derived. Instrumentation together with settlement observations during the surcharge period are presented as well and compared with the initial predictions

Feohifomicosis Producida por Alternaria Infectoria con Presentación Clínica de Múltiples Lesiones Vegetantes en un Paciente Sometido a un Trasplante Renal

The genus Alternaria is one of the most common black moulds and appears to be increasing as a causative agent of subcutaneous phaeohyphomycosis, particularly among immunosuppressed patients. A 53-year-old patient who had received a kidney transplant presented with multiple verrucous lesions on the distal extremities. Positive histopathology and cultures, in addition to rDNA ITS region sequencing, identified the fungal isolate as Alternaria infectoria. Oral itraconazole was administered for 10 months. A follow-up at 15 months demonstrated no signs of infection. Clinical manifestations of cutaneous alternariosis vary significantly and only a few cases have been described in the literature. Although optimal treatment options remain controversial, this case of phaeohyphomycosis was successfully treated with itraconazole monotherapy

Massively parallel clonal analysis using CRISPR/Cas9 induced genetic scars

A key goal of developmental biology is to understand how a single cell transforms into a full-grown organism consisting of many cells. Although impressive progress has been made in lineage tracing using imaging approaches, analysis of vertebrate lineage trees has mostly been limited to relatively small subsets of cells. Here we present scartrace, a strategy for massively parallel clonal analysis based on Cas9 induced genetic scars in the zebrafish

Deep learning prediction of proton and photon dose distributions for paediatric abdominal tumours

OBJECTIVE: Dose prediction using deep-learning networks prior to radiotherapy might lead to more efficient modality selections. The study goal was to predict proton and photon dose distributions based on the patient-specific anatomy and to assess their clinical usage for paediatric abdominal tumours. MATERIAL &METHODS: Data from 80 patients with neuroblastoma or Wilms' tumour was included. Pencil beam scanning (PBS) (5mm/3%) and volumetric-modulated arc therapy (VMAT) plans (5mm) were robustly optimized on the internal target volume (ITV). Separate 3-dimensional patch-based U-net networks were trained to predict PBS and VMAT dose distributions. Doses, planning-computed tomography images and relevant optimization masks (ITV, vertebra and organs-at-risk) of 60 patients were used for training with a 5-fold cross validation. The networks' performance was evaluated by computing the relative error between planned and predicted dose-volume histogram (DVH) parameters for 20 inference patients. In addition, the organs-at-risk mean dose difference between modalities was calculated using planned and predicted dose distributions (ΔDmean= DVMAT-DPBS). Two radiation oncologists performed a blind PBS/VMAT modality selection based on either planned or predicted ΔDmean. RESULTS: Average DVH differences between planned and predicted dose distributions were ≤|6%|for both modalities. The networks classified the organs-at-risk difference as a gain (ΔDmean>0) with 98% precision. An identical modality selection based on planned compared to predicted ΔDmean was made for 18/20 patients. CONCLUSION: Deep-learning networks for accurate prediction of proton and photon dose distributions for abdominal paediatric tumours were established. These networks allowing fast dose visualization might aid in identifying the optimal radiotherapy technique when experience and/or resources are unavailable

The Caenorhabditis elegans vulva: A post-embryonic gene regulatory network controlling organogenesis

The Caenorhabditis elegans vulva is an elegant model for dissecting a gene regulatory network (GRN) that directs postembryonic organogenesis. The mature vulva comprises seven cell types (vulA, vulB1, vulB2, vulC, vulD, vulE, and vulF), each with its own unique pattern of spatial and temporal gene expression. The mechanisms that specify these cell types in a precise spatial pattern are not well understood. Using reverse genetic screens, we identified novel components of the vulval GRN, including nhr-113 in vulA. Several transcription factors (lin-11, lin-29, cog-1, egl-38, and nhr-67) interact with each other and act in concert to regulate target gene expression in the diverse vulval cell types. For example, egl-38 (Pax2/5/8) stabilizes the vulF fate by positively regulating vulF characteristics and by inhibiting characteristics associated with the neighboring vulE cells. nhr-67 and egl-38 regulate cog-1, helping restrict its expression to vulE. Computational approaches have been successfully used to identify functional cis-regulatory motifs in the zmp-1 (zinc metalloproteinase) promoter. These results provide an overview of the regulatory network architecture for each vulval cell type