188 research outputs found
Microbial Consumption of Atmospheric Isoprene in a Temperate Forest Soil
Isoprene (2-methyl-1,3 butadiene) is a low-molecular-weight hydrocarbon emitted in large quantities to the atmosphere by vegetation and plays a large role in regulating atmospheric chemistry. Until now, the atmosphere has been considered the only significant sink for isoprene. However, in this study we performed both in situ and in vitro experiments with soil from a temperate forest near Ithaca, N.Y., that indicate that the soil provides a sink for atmospheric isoprene and that the consumption of isoprene is carried out by microorganisms. Consumption occurred rapidly in field chambers (672.60 +/- 30.12 to 2,718.36 +/- 86.40 pmol gdw day) (gdw is grams [dry weight] of soil; values are means +/- standard deviations). Subsequent laboratory experiments confirmed that isoprene loss was due to biological processes: consumption was stopped by autoclaving the soil; consumption rates increased with repeated exposure to isoprene; and consumption showed a temperature response consistent with biological activity (with an optimum temperature of 30 degrees C). Isoprene consumption was diminished under low oxygen conditions (120 +/- 7.44 versus 528.36 +/- 7.68 pmol gdw day under ambient O(2) concentrations) and showed a strong relationship with soil moisture. Isoprene-degrading microorganisms were isolated from the site, and abundance was calculated as 5.8 x 10 +/- 3.2 x 10 cells gdw. Our results indicate that soil may provide a significant biological sink for atmospheric isoprene
Mountain Pine Beetle Outbreaks in the Rocky Mountains: Regulators of Primary Productivity?
We consider the hypothesis that mountain pine beetles function as cybernetic regulators of primary productivity in ecosystems of lodgepole pine forest through their selective killing of dominant trees and the subsequent redistribution of resources. Following a recent major beetle outbreak in Yellowstone and Grand Teton national parks, surviving trees did grow significantly faster (P \u3c .1); wood production was redistributed among canopy, subcanopy, and understory trees; and annual wood production per hectare usually returned to pre-attack levels or exceeded them within 10-15 yr. However, reconstructions of annual wood production over the last 70-80 yr indicate that the beetle outbreak did not reduce the variation in productivity; rather, the beetles introduced more variation than would have existed in their absence. Hence, our results do not support the hypothesis that the beetles function as cybernetic regulators (in the strict sense). Nevertheless, the beetle-pine system that we studied shows great resilience, and the effects of beetles on primary productivity do not appear to be as severe as conventional wisdom maintains. Annual wood production per hectare returned quickly to previous levels in the stands we studied, and associated ecological changes can be considered generally benign or even beneficial
Fertilization influences the nutrient acquisition strategy of a nomadic vine in a lowland tropical forest understory
© 2018, Springer Nature Switzerland AG. Aims: Tropical tree and lianas in the understory are limited by soil nutrients despite growing in extremely low light. It is not known if nomadic vines are also limited by nutrients in low light conditions. Methods: We measured differences in root architecture and mycorrhizal colonization, and leaf nutrients of a nomadic vine, Philodendron fragrantissimum (Araceae), in nitrogen (N) and phosphorus (P) fertilization plots in a lowland tropical moist forest in central Panama to measure potential nutrient limitation. Results: Relative to plants in control plots, leaf P concentration was 54% higher and leaf N concentration was 10% higher for plants in the P- and N-addition treatments, respectively. The N:P of leaves suggested P-limitation in the N-addition treatment and the control but not in the P-addition treatment. Root branching was highest in the P-addition treatment, and P-addition reduced mycorrhizal colonization. Conclusions: The large effect of P fertilization suggests that, like many tropical plants, P. fragrantissimum has the potential to be P-limited. Although further study is needed, we suggest that nomadic vines be added to the growth forms that respond to nutrient addition in the forest understory and conclude that nutrient-limitation seems like the rule rather than the exception in the light-limited understory
Earthworm effects on the incorporation of litter C and N into soil organic matter in a sugar maple forest
To examine the mechanisms of earthworm effects on forest soil C and N, we double-labeled leaf litter with C-13 and N-15, applied it to sugar maple forest plots with and without earthworms, and traced isotopes into soil pools. The experimental design included forest plots with different earthworm community composition (dominated by Lumbricus terrestris or L. rubellus). Soil carbon pools were 37% lower in earthworm-invaded plots largely because of the elimination of the forest floor horizons, and mineral soil C:N was lower in earthworm plots despite the mixing of high C:N organic matter into soil by earthworms. Litter disappearance over the first winter-spring was highest in the L. terrestris (T) plots, but during the warm season, rapid loss of litter was observed in both L. rubellus (R) and T plots. After two years, 22.0% +/- 5.4% of C-13 released from litter was recovered in soil with no significant differences among plots. Total recovery of added C-13 (decaying litter plus soil) was much higher in no-worm (NW) plots (61-68%) than in R and T plots (20-29%) as much of the litter remained in the former whereas it had disappeared in the latter. Much higher percentage recovery of N-15 than C-13 was observed, with significantly lower values for T than R and NW plots. Higher overwinter earthworm activity in T plots contributed to lower soil N recovery. In earthworm-invaded plots isotope enrichment was highest in macroaggregates and microaggregates whereas in NW plots silt plus clay fractions were most enriched. The net effect of litter mixing and priming of recalcitrant soil organic matter (SOM), stabilization of SOM in soil aggregates, and alteration of the soil microbial community by earthworm activity results in loss of SOM and lowering of the C:N ratio. We suggest that earthworm stoichiometry plays a fundamental role in regulating C and N dynamics of forest SOM
Tracing carbon flow through a sugar maple forest and its soil components: role of invasive earthworms
This is the author accepted manuscript. The final version is available from Springer via the DOI in this recordAims: We conducted a suite of tracer studies using the stable isotope 13C to follow and quantify the flow of carbon from leaf litter and roots into soil components including aggregates and biota with and without invasive earthworms. Methods: Ten-year-old saplings of sugar maple growing in the understory of a thinned northern hardwood forest were labeled with 13CO2. The 13C labeled leaf litter was applied to forest plots with and without invasive earthworms (Lumbricidae) and traced for three years. We also traced the label from the trees through the roots and into soil components in the labeling chambers. Labeled fine roots and stem wood were incubated in a forest and the label was quantified over six years of decomposition. Results: We were able to detect the litter tracer to 10 cm soil depth in plots without earthworms and to 20 cm with earthworms present, and earthworms promoted C incorporation into soil aggregates. The soil food web was much more enriched in the label from roots than from aboveground plant litter. Rapid fine root decay was observed (k = 0.9 yr−1), and although labelled wood was almost completely decayed, little 13C was recovered in soil (0.33%). Conclusion: The approach was successful for quantifying transport and fate of tree carbon in forest soils and could be enhanced with careful quantification of gross assimilation.National Science Foundatio
Habitat filtering across tree life stages in tropical forest communities
Tropical tree communities are shaped by local-scale habitat heterogeneity in the form of topographic and edaphic variation, but the life-history stage at which habitat associations develop remains poorly understood. This is due, in part, to the fact that previous studies have not accounted for the widely disparate sample sizes number of stems that result when trees are divided into size classes. We demonstrate that the observed habitat structuring of a community is directly related to the number of individuals in the community. We then compare the relative importance of habitat heterogeneity to tree community structure for saplings, juveniles and adult trees within seven large 24-50 ha tropical forest dynamics plots while controlling for sample size. Changes in habitat structuring through tree life stages were small and inconsistent among life stages and study sites. Where found, these differences were an order of magnitude smaller than the findings of previous studies that did not control for sample size. Moreover, community structure and composition were very similar among tree sub-communities of different life stages. We conclude that the structure of these tropical tree communities is established by the time trees are large enough to be included in the census 1 cm diameter at breast height, which indicates that habitat filtering occurs during earlier life stages. © 2013 The Authors Published by the Royal Society. All rights reserved
Phylogenetic turnover along local environmental gradients in tropical forest communities
© 2016, Springer-Verlag Berlin Heidelberg. While the importance of local-scale habitat niches in shaping tree species turnover along environmental gradients in tropical forests is well appreciated, relatively little is known about the influence of phylogenetic signal in species’ habitat niches in shaping local community structure. We used detailed maps of the soil resource and topographic variation within eight 24–50 ha tropical forest plots combined with species phylogenies created from the APG III phylogeny to examine how phylogenetic beta diversity (indicating the degree of phylogenetic similarity of two communities) was related to environmental gradients within tropical tree communities. Using distance-based redundancy analysis we found that phylogenetic beta diversity, expressed as either nearest neighbor distance or mean pairwise distance, was significantly related to both soil and topographic variation in all study sites. In general, more phylogenetic beta diversity within a forest plot was explained by environmental variables this was expressed as nearest neighbor distance versus mean pairwise distance (3.0–10.3 % and 0.4–8.8 % of variation explained among plots, respectively), and more variation was explained by soil resource variables than topographic variables using either phylogenetic beta diversity metric. We also found that patterns of phylogenetic beta diversity expressed as nearest neighbor distance were consistent with previously observed patterns of niche similarity among congeneric species pairs in these plots. These results indicate the importance of phylogenetic signal in local habitat niches in shaping the phylogenetic structure of tropical tree communities, especially at the level of close phylogenetic neighbors, where similarity in habitat niches is most strongly preserved
Soil resources and topography shape local tree community structure in tropical forests
Both habitat filtering and dispersal limitation influence the compositional structure of forest communities, but previous studies examining the relative contributions of these processes with variation partitioning have primarily used topography to represent the influence of the environment. Here, we bring together data on both topography and soil resource variation within eight large (24-50 ha) tropical forest plots, and use variation partitioning to decompose community compositional variation into fractions explained by spatial, soil resource and topographic variables. Both soil resources and topography account for significant and approximately equal variation in tree community composition (9-34% and 5-29%, respectively), and all environmental variables together explain 13-39% of compositional variation within a plot. A large fraction of variation (19-37%) was spatially structured, yet unexplained by the environment, suggesting an important role for dispersal processes and unmeasured environmental variables. For the majority of sites, adding soil resource variables to topography nearly doubled the inferred role of habitat filtering, accounting for variation in compositional structure that would previously have been attributable to dispersal. Our results, illustrated using a new graphical depiction of community structure within these plots, demonstrate the importance of small-scale environmental variation in shaping local community structure in diverse tropical forests around the globe. © 2012 The Author(s) Published by the Royal Society. All rights reserved
Sensitivity of wetland methane emissions to model assumptions: application and model testing against site observations
Peer reviewe
MULTI-SCALE VARIATION IN FINE-ROOT BIOMASS IN A TROPICAL RAIN FOREST: A SEVEN-YEAR STUDY
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