Estimating Forest Age and Site Productivity using Time Series of 3D Remote Sensing Data

ABSTRACT Three-dimensional (3D) data about forest captured by airborne laser scanning (ALS) have revolutionized forest management planning. Accurate, updated large-scale maps of forest variables produced with low costs today support greatly improved decisions about silvicultural treatments compared to the past practice based on field surveyed data only. These maps usually lack important information about forest age and site productivity, as this cannot be accurately assessed from the available ALS data. In Sweden, ALS has recently been performed nation-wide, except the mountainous area, to produce a new and accurate digital terrain model (DTM). This DTM enables extremely costefficient extraction of 3D data about the forest from other sources than ALS, such as automatic stereo-matching of aerial images as well as from single-pass spaceborne interferometric synthetic aperture radar (InSAR). In contrast to ALS, these data sources can provide low-cost time-series of 3D data. Aerial images of Sweden are often available in archives back to approximately 1960, and the TanDEM-X SAR system has the potential to provide new data every second week over large areas. These data have a potentially high value for forest management planning, since they may provide missing and highly important information -forest site productivity, Site Index (SI) and forest age. This pilot study explores a least-squares minimization approach to estimate forest age and SI from time series of 3D data produced by 1) image matching of DMC aerial images, and 2) TanDEM-X SAR data

Operational prediction of forest attributes using standardised harvester data and airborne laser scanning data in Sweden

With cut-to-length harvesters, tree stems are measured and cut into different timber assortments at the time of felling. These measurement data collected from harvested trees can be used for decision-support at different levels of the forest industry chain and also for forest planning when combined with remote sensing data. The aim of this study was to examine the operational application for predicting merchantable stem volume, basal area, basal area-weighted mean tree height, basal area-weighted mean stem diameter and diameter distribution at stand level with airborne laser scanning data and harvester data from final felling operations. The area-based approach using k-MSN estimation was evaluated for six different variants of spatial partitioning. The results were stand level predictions with relative root mean square errors of 11-14%, 10-15%, 3-4% and 6-7% for merchantable stem volume, basal area, basal area-weighted mean tree height and basal area-weighted mean stem diameter, respectively. Predictions of stem diameter distributions resulted in error indices of 0.13-0.14. The results demonstrate that harvester data from cut forests may serve as ground truth to airborne laser scanning data and provide accurate forest estimates at stand level. The predicted diameter distributions could be useful for improving yield estimates and bucking simulations

Predictions of Biomass Change in a Hemi-Boreal Forest Based on Multi-Polarization L- and P-Band SAR Backscatter

Above-ground biomass change accumulated during four growth seasons in a hemi-boreal forest was predicted using airborne L- and P-band synthetic aperture radar (SAR) backscatter. The radar data were collected in the BioSAR 2007 and BioSAR 2010 campaigns over the Remningstorp test site in southern Sweden. Regression models for biomass change were developed from biomass maps created using airborne LiDAR data and field measurements. To facilitate training and prediction on image pairs acquired at different dates, a backscatter offset correction method for L-band data was developed and evaluated. The correction, based on the HV/VV backscatter ratio, facilitated predictions across image pairs almost identical to those obtained using data from the same image pair for both training and prediction. For P-band, previous positive results using an offset correction based on the HH/VV ratio were validated. The best L-band model achieved a root mean square error (RMSE) of 21 t/ha, and the best P-band model achieved an RMSE of 19 t/ha. Those accuracies are similar to that of the LiDAR-based biomass change of 18 t/ha. The limitation of using LiDAR-based data for training was considered. The findings demonstrate potential for improved biomass change predictions from L-band backscatter despite varying environmental conditions and calibration uncertainties

Predictions of Biomass Change in a Hemi-Boreal Forest Based on Multi-Polarization L- and P-Band SAR Backscatter

Above-ground biomass change accumulated during four growth seasons in a hemi-boreal forest was predicted using airborne L- and P-band synthetic aperture radar (SAR) backscatter. The radar data were collected in the BioSAR 2007 and BioSAR 2010 campaigns over the Remningstorp test site in southern Sweden. Regression models for biomass change were developed from biomass maps created using airborne LiDAR data and field measurements. To facilitate training and prediction on image pairs acquired at different dates, a backscatter offset correction method for L-band data was developed and evaluated. The correction, based on the HV/VV backscatter ratio, facilitated predictions across image pairs almost identical to those obtained using data from the same image pair for both training and prediction. For P-band, previous positive results using an offset correction based on the HH/VV ratio were validated. The best L-band model achieved a root mean square error (RMSE) of 21 t/ha, and the best P-band model achieved an RMSE of 19 t/ha. Those accuracies are similar to that of the LiDAR-based biomass change of 18 t/ha. The limitation of using LiDAR-based data for training was considered. The findings demonstrate potential for improved biomass change predictions from L-band backscatter despite varying environmental conditions and calibration uncertainties

BIOSAR 2010 - A SAR campaign in support to the BIOMASS mission

The ESA funded campaign BioSAR 2010 was carried out at the forestry test site Remningstorp in southern Sweden, in support to the BIOMASS satellite mission under study. Fully polarimetric SAR data were successfully acquired at L- and P-band using ONERA's multi-frequency system SETHI. In addition with other data types gathered, e.g. LiDAR and in-situ measurements, the compiled data set will be used for analyses and comparisons with biomass estimation results obtained at the same test site in the campaign BioSAR 2007, in which DLR's E-SAR made the SAR imaging. Detection of forest changes, robustness of biomass retrieval algorithms and long-term P-band coherence will be in focus as well as cross-validations between the two SAR sensors

Estimation of forest stem volume using ALOS-2 PALSAR-2 satellite images

A first evaluation of ALOS-2 PALSAR-2 data for forest stem volume estimation has been performed at a coniferous dominated test site in southern Sweden. Both the Fine Beam Dual (FBD) polarization and the Quad-polarimetric mode were investigated. Forest plots with stem volume reaching up to a maximum of about 620 m3 ha-1 (corresponding to 370 tons ha-1) were analyzed by relating backscatter intensity to field data using an exponential model derived from the Water Cloud Model. The estimation accuracy of stem volume at plot level (0.5 ha) was calculated in terms of Root Mean Square Error (RMSE). For the best case investigated an RMSE of 43.1% was obtained using one of the FBD HV-polarized images. The corresponding RMSE for the FBD HH-polarized images was 43.9%. In the Quadpolarimetric mode the lowest RMSE at HV- and HHpolarization was found to be 39.8% and 47.4%, respectively

Genetic barriers to historical gene flow between cryptic species of alpine bumblebees revealed by comparative population genomics

Evidence is accumulating that gene flow commonly occurs between recently diverged species, despite the existence of barriers to gene flow in their genomes. However, we still know little about what regions of the genome become barriers to gene flow and how such barriers form. Here, we compare genetic differentiation across the genomes of bumblebee species living in sympatry and allopatry to reveal the potential impact of gene flow during species divergence and uncover genetic barrier loci. We first compared the genomes of the alpine bumblebee Bombus sylvicola and a previously unidentified sister species living in sympatry in the Rocky Mountains, revealing prominent islands of elevated genetic divergence in the genome that colocalize with centromeres and regions of low recombination. This same pattern is observed between the genomes of another pair of closely related species living in allopatry (B. bifarius and B. vancouverensis). Strikingly however, the genomic islands exhibit significantly elevated absolute divergence (dXY) in the sympatric, but not the allopatric, comparison indicating that they contain loci that have acted as barriers to historical gene flow in sympatry. Our results suggest that intrinsic barriers to gene flow between species may often accumulate in regions of low recombination and near centromeres through processes such as genetic hitchhiking, and that divergence in these regions is accentuated in the presence of gene flow

ZBED6, a Novel Transcription Factor Derived from a Domesticated DNA Transposon Regulates IGF2 Expression and Muscle Growth

This study identifies a previously uncharacterized protein, encoded by a domesticated DNA transposon, called ZBED6 that regulates the expression of the insulin-like growth factor 2 (IGF2) gene, and possibly numerous others, in all placental mammals including human

The use of airborne laser scanning to develop a pixel-based stratification for a verified carbon offset project

Background The voluntary carbon market is a new and growing market that is increasingly important to consider in managing forestland. Monitoring, reporting, and verifying carbon stocks and fluxes at a project level is the single largest direct cost of a forest carbon offset project. There are now many methods for estimating forest stocks with high accuracy that use both Airborne Laser Scanning (ALS) and high-resolution optical remote sensing data. However, many of these methods are not appropriate for use under existing carbon offset standards and most have not been field tested. Results This paper presents a pixel-based forest stratification method that uses both ALS and optical remote sensing data to optimally partition the variability across an ~10,000 ha forest ownership in Mendocino County, CA, USA. This new stratification approach improved the accuracy of the forest inventory, reduced the cost of field-based inventory, and provides a powerful tool for future management planning. This approach also details a method of determining the optimum pixel size to best partition a forest. Conclusions The use of ALS and optical remote sensing data can help reduce the cost of field inventory and can help to locate areas that need the most intensive inventory effort. This pixel-based stratification method may provide a cost-effective approach to reducing inventory costs over larger areas when the remote sensing data acquisition costs can be kept low on a per acre basis