Microbial trimethylamine metabolism in marine environments

Trimethylamine (TMA) is common in marine environments. Although the presence of this compound in the oceans has been known for a long time, unlike the mammalian gastrointestinal tract, where TMA metabolism by microorganisms has been studied intensely, many questions remain unanswered about the microbial metabolism of marine TMA. This minireview summarizes what is currently known about the sources and fate of TMA in marine environments and the different pathways and enzymes involved in TMA metabolism in marine bacteria. This review also raises several questions about microbial TMA metabolism in the marine environments and proposes potential directions for future studies

A 40 Gbaud integratedsilicon coherent receiver

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New Revival Phenomena for Bidirectional Dispersive Hyperbolic Equations

In this paper, the dispersive revival and fractalization phenomena for bidirectional dispersive equations on a bounded interval subject to periodic boundary conditions and discontinuous initial profiles are investigated. Firstly, we study the periodic initial-boundary value problem of the linear beam equation with step function initial data, and analyze the manifestation of the revival phenomenon for the corresponding solution at rational times. Next, we extend the investigation to periodic initial-boundary value problems of more general bidirectional dispersive equations. We prove that, if the initial functions are of bounded variation, the dynamical evolution of such periodic problems depend essentially upon the large wave number asymptotics of the associated dispersion relations. Integral polynomial or asymptotically integral polynomial dispersion relations produce dispersive revival/fractalization rational/irrational dichotomies, whereas those with non-polynomial growth result in fractal profiles at all times. Finally, numerical experiments, in the concrete case of the nonlinear beam equation, are used to demonstrate how such effects persist into the nonlinear regime.Comment: 28 pages, 11 figure

Mediator MED23 Links Insulin Signaling to the Adipogenesis Transcription Cascade

SummaryAdipocyte differentiation is orchestrated by multiple signaling pathways and a temporally regulated transcriptional cascade. However, the mechanisms by which insulin signaling is linked to this cascade remain unclear. Here we show that the Med23 subunit of the Mediator Complex and its interacting transcription factor Elk1 are critical regulators of adipogenesis. Med23−/− embryonic fibroblast cells were refractory to hormone-induced adipogenesis. Knockdown of either Med23 or Elk1, or overexpression of dominant-negative Elk1, inhibited adipogenesis. In the absence of either Elk1 or Med23, Krox20, an immediate early gene stimulated by insulin during adipogenesis, was uninducible. Moreover, the adipogenic defect in Med23-deficient cells was rescued by ectopic expression of Krox20 or one of its downstream factors, C/EBPβ or PPARγ. Mechanistically, the insulin-stimulated, Med23-deficient preinitiation complex failed to initiate robust transcription of Krox20. Collectively, our results suggest that Med23 serves as a critical link transducing insulin signaling to the transcriptional cascade during adipocyte differentiation

Broadband Radio Spectral Observations of Solar Eclipse on 2008-08-01 and Implications on the Quiet Sun Atmospheric Model

Based on the joint-observations of the radio broadband spectral emissions of solar eclipse on August 1, 2008 at Jiuquan (total eclipse) and Huairou (partial eclipse) at the frequencies of 2.00 -- 5.60 GHz (Jiuquan), 2.60 -- 3.80 GHZ (Chinese solar broadband radiospectrometer, SBRS/Huairou), and 5.20 -- 7.60 GHz (SBRS/Huairou), the authors assemble a successive series of broadband spectrum with a frequency of 2.60 -- 7.60 GHz to observe the solar eclipse synchronously. This is the first attempt to analyze the solar eclipse radio emission under the two telescopes located at different places with broadband frequencies in the periods of total and partial eclipse. With these analyses, the authors made a new semiempirical model of the coronal plasma density of the quiet Sun and made a comparison with the classic models.Comment: 10 pages, 4 figures, published on Sci. China Ser. G, 2009, Vol.52, page 1765-177

Oocyte stage-specific effects of MTOR determine granulosa cell fate and oocyte quality in mice.

MTOR (mechanistic target of rapamycin) is a widely recognized integrator of signals and pathways key for cellular metabolism, proliferation, and differentiation. Here we show that conditional knockout (cKO) of Mtor in either primordial or growing oocytes caused infertility but differentially affected oocyte quality, granulosa cell fate, and follicular development. cKO of Mtor in nongrowing primordial oocytes caused defective follicular development leading to progressive degeneration of oocytes and loss of granulosa cell identity coincident with the acquisition of immature Sertoli cell-like characteristics. Although Mtor was deleted at the primordial oocyte stage, DNA damage accumulated in oocytes during their later growth, and there was a marked alteration of the transcriptome in the few oocytes that achieved the fully grown stage. Although oocyte quality and fertility were also compromised when Mtor was deleted after oocytes had begun to grow, these occurred without overtly affecting folliculogenesis or the oocyte transcriptome. Nevertheless, there was a significant change in a cohort of proteins in mature oocytes. In particular, down-regulation of PRC1 (protein regulator of cytokinesis 1) impaired completion of the first meiotic division. Therefore, MTOR-dependent pathways in primordial or growing oocytes differentially affected downstream processes including follicular development, sex-specific identity of early granulosa cells, maintenance of oocyte genome integrity, oocyte gene expression, meiosis, and preimplantation developmental competence. Proc Natl Acad Sci U S A 2018 Jun 5; 115(23):E5326-E5333

Combining Paleomagnetic and Re‐Os Isotope Data to Date Hydrocarbon Generation and Accumulation Processes

Unraveling the complex relationship between orogenesis and hydrocarbon formation and accumulation is challenging and is often hampered by physical and chemical overprints of younger events. The Permian reservoir in the Longmen Shan orogen, South China, is such an example, and its evolution has been hotly debated. In this study, we use a new combination of paleomagnetic dating analysis and Re–Os isotope dating to try to resolve this. Paleomagnetic dating of the hydrocarbon-host carbonate indicates two remagnetization events during: (a) the Late Triassic, and (b) the Middle Jurassic–Cretaceous. These two remagnetization events are shown to represent two distinct stages of hydrocarbon accumulation. The paleomagnetic estimates are supported by Re–Os dating of bitumen (∼264 Ma) and oil (∼94 Ma). The two different Re–Os ages are associated with two periods of oil generation. We interpret these data in terms of known geological processes: (a) the ∼260 Ma Dongwu large igneous province caused oil generation, and the Indosinian tectonic event caused the migration and accumulation; and (b) the Late Cretaceous Yanshan orogenic events promoted another generation and entrapment of oil in the same reservoir. This combined approach reliably tracks the sequence of oil generation and accumulation, even when the source rock is uncertain, and multi-phase accumulation and complex tectonism has occurred. Given that paleomagnetic and Re–Os dating are independent methods which can constrain multiple geological processes, when used together they have the potential to be universally applied