Additive Function of Vibrio vulnificus MARTXVv and VvhA Cytolysins Promotes Rapid Growth and Epithelial Tissue Necrosis During Intestinal Infection

Vibrio vulnificus is a pathogen that causes both severe necrotizing wound infections and life-threatening food-borne infections. Food-borne infection is particularly lethal as the infection can progress rapidly to primary septicemia resulting in death from septic shock and multiorgan failure. In this study, we use both bioluminescence whole animal imaging and V. vulnificus bacterial colonization of orally infected mice to demonstrate that the secreted multifunctional-autoprocessing RTX toxin (MARTXVv) and the cytolysin/hemolysin VvhA of clinical isolate CMCP6 have an important function in the gut to promote early in vivo growth and dissemination of this pathogen from the small intestine to other organs. Using histopathology, we find that both cytotoxins can cause villi disruption, epithelial necrosis, and inflammation in the mouse small intestine. A double mutant deleted of genes for both cytotoxins was essentially avirulent, did not cause intestinal epithelial tissue damage, and was cleared from infected mice by 36 hours by an effective immune response. Therefore, MARTXVv and VvhA seem to play an additive role for pathogenesis of CMCP6 causing intestinal tissue damage and inflammation that then promotes dissemination of the infecting bacteria to the bloodstream and other organs. In the absence of these two secreted factors, we propose that this bacterium is unable to cause intestinal infection in humans

N_pN_n dependence of empirical formula for the lowest excitation energy of the 2^+ states in even-even nuclei

We examine the effects of the additional term of the type $\sim e^{- \lambda' N_pN_n}$ on the recently proposed empirical formula for the lowest excitation energy of the $2^+$ states in even-even nuclei. This study is motivated by the fact that this term carries the favorable dependence of the valence nucleon numbers dictated by the $N_pN_n$ scheme. We show explicitly that there is not any improvement in reproducing $E_x(2_1^+)$ by including the extra $N_pN_n$ term. However, our study also reveals that the excitation energies $E_x(2_1^+)$, when calculated by the $N_pN_n$ term alone (with the mass number $A$ dependent term), are quite comparable to those calculated by the original empirical formula.Comment: 14 pages, 5 figure

Polarization-sensitive quantum-optical coherence tomography

We set forth a polarization-sensitive quantum-optical coherence tomography (PS-QOCT) technique that provides axial optical sectioning with polarization-sensitive capabilities. The technique provides a means for determining information about the optical path length between isotropic reflecting surfaces, the relative magnitude of the reflectance from each interface, the birefringence of the interstitial material, and the orientation of the optical axis of the sample. PS-QOCT is immune to sample dispersion and therefore permits measurements to be made at depths greater than those accessible via ordinary optical coherence tomography. We also provide a general Jones matrix theory for analyzing PS-QOCT systems and outline an experimental procedure for carrying out such measurements.Comment: 15 pages, 5 figures, to appear in Physical Review

Electronic structure of YbB6_{6}: Is it a Topological Insulator or not?

To resolve the controversial issue of the topological nature of the electronic structure of YbB$_{6}$, we have made a combined study using density functional theory (DFT) and angle resolved photoemission spectroscopy (ARPES). Accurate determination of the low energy band topology in DFT requires the use of modified Becke-Johnson exchange potential incorporating the spin-orbit coupling and the on-site Coulomb interaction $U$ of Yb $4f$ electrons as large as 7 eV. We have double-checked the DFT result with the more precise GW band calculation. ARPES is done with the non-polar (110) surface termination to avoid band bending and quantum well confinement that have confused ARPES spectra taken on the polar (001) surface termination. Thereby we show definitively that YbB$_{6}$ has a topologically trivial B 2$p$-Yb 5$d$ semiconductor band gap, and hence is a non-Kondo non-topological insulator (TI). In agreement with theory, ARPES shows pure divalency for Yb and a $p$-$d$ band gap of 0.3 eV, which clearly rules out both of the previous scenarios of $f$-$d$ band inversion Kondo TI and $p$-$d$ band inversion non-Kondo TI. We have also examined the pressure-dependent electronic structure of YbB$_{6}$, and found that the high pressure phase is not a Kondo TI but a \emph{p}-\emph{d} overlap semimetal.Comment: The main text is 6 pages with 4 figures, and the supplementary information contains 6 figures. 11 pages, 10 figures in total To be appeared in Phys. Rev. Lett. (Online publication is around March 16 if no delays.

Lyman alpha line formation in starbursting galaxies II. Extremely Thick, Dustless, and Static HI Media

The Lya line transfer in an extremely thick medium of neutral hydrogen is investigated by adopting an accelerating scheme in our Monte Carlo code to skip a large number of core or resonant scatterings. This scheme reduces computing time significantly with no sacrifice in the accuracy of the results. We applied this numerical method to the Lya transfer in a static, uniform, dustless, and plane-parallel medium. Two types of photon sources have been considered, the midplane source and the uniformly distributed sources. The emergent profiles show double peaks and absorption trough at the line-center. We compared our results with the analytic solutions derived by previous researchers, and confirmed that both solutions are in good agreement with each other. We investigated the directionality of the emergent Lya photons and found that limb brightening is observed in slightly thick media while limb darkening appears in extremely thick media. The behavior of the directionality is noted to follow that of the Thomson scattered radiation in electron clouds, because both Lya wing scattering and Thomson scattering share the same Rayleigh scattering phase function. The mean number of wing scatterings just before escape is in exact agreement with the prediction of the diffusion approximation. The Lya photons constituting the inner part of the emergent profiles follow the relationship derived from the diffusion approximation. We present a brief discussion on the application of our results to the formation of Lya broad absorption troughs and P-Cygni type Lya profiles seen in the UV spectra of starburst galaxies.Comment: 24 papges, 12 figures, The revised version submitted to Ap

Probing Dark Energy with Baryonic Acoustic Oscillations from Future Large Galaxy Redshift Surveys

We show that the measurement of the baryonic acoustic oscillations in large high redshift galaxy surveys offers a precision route to the measurement of dark energy. The cosmic microwave background provides the scale of the oscillations as a standard ruler that can be measured in the clustering of galaxies, thereby yielding the Hubble parameter and angular diameter distance as a function of redshift. This, in turn, enables one to probe dark energy. We use a Fisher matrix formalism to study the statistical errors for redshift surveys up to z=3 and report errors on cosmography while marginalizing over a large number of cosmological parameters including a time-dependent equation of state. With redshifts surveys combined with cosmic microwave background satellite data, we achieve errors of 0.037 on Omega_x, 0.10 on w(z=0.8), and 0.28 on dw(z)/dz for cosmological constant model. Models with less negative w(z) permit tighter constraints. We test and discuss the dependence of performance on redshift, survey conditions, and fiducial model. We find results that are competitive with the performance of future supernovae Ia surveys. We conclude that redshift surveys offer a promising independent route to the measurement of dark energy.Comment: submitted to ApJ, 24 pages, LaTe

TiO2/Ferroelectric Heterostructures as Dynamic Polarization-Promoted Catalysts for Photochemical and Electrochemical Oxidation of Water

Using first-principles density functional theory calculations, we explore the chemical activity of epitaxial heterostructures of TiO2 anatase on strained polar SrTiO3 films focusing on the oxygen evolution reaction (OER), the bottleneck of water splitting. Our results show that the reactivity of the TiO2 surface is tuned by electric dipoles dynamically induced by the adsorbed species during the intermediate steps of the reaction while the initial and final steps remain unaffected. Compared to the OER on unsupported TiO2, the combined effects of the dynamically induced dipoles and epitaxial strain strongly reduce rate-limiting thermodynamic barriers and significantly improve the efficiency of the reaction.open5

Singularity Structures in Coulomb-Type Potentials in Two Body Dirac Equations of Constraint Dynamics

Two Body Dirac Equations (TBDE) of Dirac's relativistic constraint dynamics have been successfully applied to obtain a covariant nonperturbative description of QED and QCD bound states. Coulomb-type potentials in these applications lead naively in other approaches to singular relativistic corrections at short distances that require the introduction of either perturbative treatments or smoothing parameters. We examine the corresponding singular structures in the effective potentials of the relativistic Schroedinger equation obtained from the Pauli reduction of the TBDE. We find that the relativistic Schroedinger equation lead in fact to well-behaved wave function solutions when the full potential and couplings of the system are taken into account. The most unusual case is the coupled triplet system with S=1 and L={(J-1),(J+1)}. Without the inclusion of the tensor coupling, the effective S-state potential would become attractively singular. We show how including the tensor coupling is essential in order that the wave functions be well-behaved at short distances. For example, the S-state wave function becomes simply proportional to the D-state wave function and dips sharply to zero at the origin, unlike the usual S-state wave functions. Furthermore, this behavior is similar in both QED and QCD, independent of the asymptotic freedom behavior of the assumed QCD vector potential. Light- and heavy-quark meson states can be described well by using a simplified linear-plus-Coulomb-type QCD potential apportioned appropriately between world scalar and vector potentials. We use this potential to exhibit explicitly the origin of the large pi-rho splitting and effective chiral symmetry breaking. The TBDE formalism developed here may be used to study quarkonia in quark-gluon plasma environments.Comment: 23 pages, 4 figure

Fluctuation-driven capacity distribution in complex networks

Maximizing robustness and minimizing cost are common objectives in the design of infrastructure networks. However, most infrastructure networks evolve and operate in a highly decentralized fashion, which may significantly impact the allocation of resources across the system. Here, we investigate this question by focusing on the relation between capacity and load in different types of real-world communication and transportation networks. We find strong empirical evidence that the actual capacity of the network elements tends to be similar to the maximum available capacity, if the cost is not strongly constraining. As more weight is given to the cost, however, the capacity approaches the load nonlinearly. In particular, all systems analyzed show larger unoccupied portions of the capacities on network elements subjected to smaller loads, which is in sharp contrast with the assumptions involved in (linear) models proposed in previous theoretical studies. We describe the observed behavior of the capacity-load relation as a function of the relative importance of the cost by using a model that optimizes capacities to cope with network traffic fluctuations. These results suggest that infrastructure systems have evolved under pressure to minimize local failures, but not necessarily global failures that can be caused by the spread of local damage through cascading processes