New insights into the supression of plant pathogenic fungus (Phytophthora cinnamomi) by compost leachates

Use of compost as a soil conditioner and low-grade fertiliser is gaining popularity worldwide (Epstein, 1997). Compost not only adds plant nutrients to the soil, but also improves physical properties of soil such as buffering capacity, cation exchange capacity and water holding capacity. In addition to these benefits, compost can also suppress plant diseases caused by Phytophthora cinnamomi (Hoitink et al., 1977), Pythium aphanidermatum (Mandelbaum and Hadar, 1990), Rhizoctonia solani and Sclerotium rolfoii (Gorodecki and Hadar, 1990). Irwin et al., (1995) reported that the diseases caused by P. cinnamomi are directly responsible for considerable economic losses in many horticultural, ornamental and forestry industries throughout Australia. Phytophthora spp. continue to be the focus of attention of many researchers due to the diversity of P. cinnamomi-host interactions and their potential economic impact on a wide range of industries. The practise of using methyl bromide and other chemicals for disinfection of soil is widespread (Trill as et al., 2002). However, the use of methyl bromide and other chemicals is phased out in the USA and Europe. The suppression of soil-borne plant fungus by composts produced from tree barks (Spencer et al., 1982) and municipal solid wastes is well documented (Trill as et al., 2002). Composts that suppress plant disease have been extensively described and are used in greenhouse production systems (Lazarovitis et aI, 2001). However, most studies have focused on compo sting different types of materials and their effect on fungal pathogens inhibition rather than compo sting conditions that may produce suppressive composts. An objective of this study was to investigate the role of moisture, aeration and compost maturity in enhancing the inhibition effect of compost on the plant pathogen P. cinnamomi. A further objective was to generate an increased understanding of the mechanism of growth inhibition

Speed of sound in disordered Bose-Einstein condensates

Disorder modifies the sound-wave excitation spectrum of Bose-Einstein condensates. We consider the classical hydrodynamic limit, where the disorder correlation length is much longer than the condensate healing length. By perturbation theory, we compute the phonon lifetime and correction to the speed of sound. This correction is found to be negative in all dimensions, with universal asymptotics for smooth correlations. Considering in detail optical speckle potentials, we find a quite rich intermediate structure. This has consequences for the average density of states, particularly in one dimension, where we find a "boson dip" next to a sharp "boson peak" as function of frequency. In one dimension, our prediction is verified in detail by a numerical integration of the Gross-Pitaevskii equation.Comment: final, extended version with 2 new figure

Finite-Temperature Fidelity-Metric Approach to the Lipkin-Meshkov-Glick Model

The fidelity metric has recently been proposed as a useful and elegant approach to identify and characterize both quantum and classical phase transitions. We study this metric on the manifold of thermal states for the Lipkin-Meshkov-Glick (LMG) model. For the isotropic LMG model, we find that the metric reduces to a Fisher-Rao metric, reflecting an underlying classical probability distribution. Furthermore, this metric can be expressed in terms of derivatives of the free energy, indicating a relation to Ruppeiner geometry. This allows us to obtain exact expressions for the (suitably rescaled) metric in the thermodynamic limit. The phase transition of the isotropic LMG model is signalled by a degeneracy of this (improper) metric in the paramagnetic phase. Due to the integrability of the isotropic LMG model, ground state level crossings occur, leading to an ill-defined fidelity metric at zero temperature.Comment: 18 pages, 3 figure

Classification of Intervertebral Disc Disease

Intervertebral disc disease (IVDD) has been recognized in dogs since the 1800s, when the first descriptions of extruded disc material within the vertebral canal were published. In the intervening time our understanding of intervertebral disc pathology in dogs and cats has increased dramatically, with many variations of IVDD described. Whilst the volume of literature and collective understanding of IVDD has expanded, there has also been scope for confusion as the definition of intervertebral disc disease, with its myriad different manifestations, becomes more complicated. A large volume of literature has aimed to combine the use of histopathology, diagnostic imaging and clinical findings to better understand the various ways in which IVDD can be classified. Much of this research has focused on the classification of mechanisms of intervertebral disc degeneration, centering around the differences between, and overlaps in, IVDD in chondrodystrophic and non-chondrodystrophic dog breeds. However, with the increasing availability of advanced imaging modalities allowing more accurate antemortem diagnosis, the concept of IVDD has expanded to include other clinical presentations that may not fit into traditional models of classification of IVDD. This review aims to provide an up to date overview of both historical and current systems of IVDD classification, highlighting the important findings and controversies underpinning them

Coalition Resilient Outcomes in Max k-Cut Games

We investigate strong Nash equilibria in the \emph{max $k$-cut game}, where we are given an undirected edge-weighted graph together with a set $\{1,\ldots, k\}$ of $k$ colors. Nodes represent players and edges capture their mutual interests. The strategy set of each player $v$ consists of the $k$ colors. When players select a color they induce a $k$-coloring or simply a coloring. Given a coloring, the \emph{utility} (or \emph{payoff}) of a player $u$ is the sum of the weights of the edges $\{u,v\}$ incident to $u$, such that the color chosen by $u$ is different from the one chosen by $v$. Such games form some of the basic payoff structures in game theory, model lots of real-world scenarios with selfish agents and extend or are related to several fundamental classes of games. Very little is known about the existence of strong equilibria in max $k$-cut games. In this paper we make some steps forward in the comprehension of it. We first show that improving deviations performed by minimal coalitions can cycle, and thus answering negatively the open problem proposed in \cite{DBLP:conf/tamc/GourvesM10}. Next, we turn our attention to unweighted graphs. We first show that any optimal coloring is a 5-SE in this case. Then, we introduce $x$-local strong equilibria, namely colorings that are resilient to deviations by coalitions such that the maximum distance between every pair of nodes in the coalition is at most $x$. We prove that $1$-local strong equilibria always exist. Finally, we show the existence of strong Nash equilibria in several interesting specific scenarios.Comment: A preliminary version of this paper will appear in the proceedings of the 45th International Conference on Current Trends in Theory and Practice of Computer Science (SOFSEM'19

Bogoliubov Excitations of Disordered Bose-Einstein Condensates

We describe repulsively interacting Bose-Einstein condensates in spatially correlated disorder potentials of arbitrary dimension. The first effect of disorder is to deform the mean-field condensate. Secondly, the quantum excitation spectrum and condensate population are affected. By a saddle-point expansion of the many-body Hamiltonian around the deformed mean-field ground state, we derive the fundamental quadratic Hamiltonian of quantum fluctuations. Importantly, a basis is used such that excitations are orthogonal to the deformed condensate. Via Bogoliubov-Nambu perturbation theory, we compute the effective excitation dispersion, including mean free paths and localization lengths. Corrections to the speed of sound and average density of states are calculated, due to correlated disorder in arbitrary dimensions, extending to the case of weak lattice potentials.Comment: 23 pages, 11 figure

Characterization of Desulfovibrio fructosovorans sp. nov.

Desulfovibrio strain JJ isolated from estuarine sediment differed from all other described Desulfovibrio species by the ability to degrade fructose. The oxidation was incomplete, leading to acetate production. Fructose, malate and fumarate were fermented mainly to succinate and acetate in the absence of an external electron acceptor. The pH and temperature optima for growth were 7.0 and 35° C respectively. Strain JJ was motile by means of a single polar flagellum. The DNA base composition was 64.13% G+C. Cytochrome c3 and desulfoviridin were present. These characteristics established the isolate as a new species of the genus Desulfovibrio, and the name Desulfovibrio fructosovorans is proposed

Attosecond electron-spin dynamics in Xe 4d photoionization

The photoionization of xenon atoms in the 70-100 eV range reveals several fascinating physical phenomena such as a giant resonance induced by the dynamic rearrangement of the electron cloud after photon absorption, an anomalous branching ratio between intermediate Xe$^+$ states separated by the spin-orbit interaction and multiple Auger decay processes. These phenomena have been studied in the past, using in particular synchrotron radiation, but without access to real-time dynamics. Here, we study the dynamics of Xe 4d photoionization on its natural time scale combining attosecond interferometry and coincidence spectroscopy. A time-frequency analysis of the involved transitions allows us to identify two interfering ionization mechanisms: the broad giant dipole resonance with a fast decay time less than 50 as and a narrow resonance at threshold induced by spin-flip transitions, with much longer decay times of several hundred as. Our results provide new insight into the complex electron-spin dynamics of photo-induced phenomena

A De Novo Mutation in COL1A1 in a Holstein Calf with Osteogenesis Imperfecta Type II

Osteogenesis imperfecta (OI) type II is a genetic connective tissue disorder characterized by bone fragility, severe skeletal deformities and shortened limbs. OI usually causes perinatal death of affected individuals. OI type II diagnosis in humans is established by the identification of heterozygous mutations in genes coding for collagens. The purpose of this study was to characterize the pathological phenotype of an OI type II-affected neonatal Holstein calf and to identify the causative genetic variant by whole-genome sequencing (WGS). The calf had acute as well as intrauterine fractures, abnormally shaped long bones and localized arthrogryposis. Genetic analysis revealed a private heterozygous missense variant in COL1A1 (c.3917T>A) located in the fibrillar collagen NC1 domain (p.Val1306Glu) that most likely occurred de novo. This confirmed the diagnosis of OI type II and represents the first report of a pathogenic variant in the fibrillar collagen NC domain of COL1A1 associated to OI type II in domestic animals. Furthermore, this study highlights the utility of WGS-based precise diagnostics for understanding congenital disorders in cattle and the need for continued surveillance for rare lethal genetic disorders in cattle