Geochemical Evaluation of Surface Sediments in Niger Delta Mangrove, Nigeria

Mangrove surface sediments from Choba, Ogbogoro and Isaka along the New Calabar and Bonny rivers respectively in Niger Delta, Nigeria were sampled and analyzed to evaluate their geochemical compositions, inter-element relationships and potential ecological impact. Results show that the highest mean concentrations in parts per million (ppm) of Pb, Zn, Cu, Ni, Cr, Y, Nb, Th and Sc in Choba sediments were 36.2, 65.2, 19.6, 47.4, 121.6, 21.4, 23.0, 13.8 and 16.8; As, V, Sr, Zr, TS and F in Ogbogoro sediments were 6.4, 192.3, 70.0, 273.4, 14627.0 and 104.8 while Br, I and Cl in Isaka sediments were 27.4, 41.4 and 4189.6 respectively. Box plot of the elements show contrasting concentrations in different sampling locations. Compared to the upper continental crust (UCC), As and Ni are higher in Choba, Ogbogoro and Isaka. The abundance of Pb was found to be higher in Choba and Ogbogoro. Though Th and Sc are more concentrated in Choba and Ogbogoro relative to the UCC, they were found to be lower in Isaka. However, Zn, Cu, Cr, V, Sr and Zr concentrations in the UCC were found to be higher than the mean concentrations of these elements in Choba, Ogbogoro and Isaka mangrove sediments. Most of the trace elements correlated positively and strongly with Fe2O3. This implies that Fe2O3 is important in controlling metal concentrations in the area. The concentrations of As and Zn were either equal to or below the low effect level (LEL) and interim sediment quality guideline (ISQG). Pb, Cu and Ni were found to be higher than LEL and ISQG in Choba while Cr concentrations in Choba, Ogbogoro and Isaka all exceeded the LEL, ISQG and severe effect level (SEL) values but below probable effect level (PEL) value; thus indicating potentials for moderate to severe ecological harm. Keywords: Mangrove sediments, Geochemistry, Heavy metals, Sediment quality, Niger delt

Geochemical evaluation of land use at a medieval harbor site in Masuda City, Chugoku region, Japan

A large-scale Medieval harbor site has been recently discovered at Nakazu-Higashihara in Masuda City, Chugoku region, Japan. The Medieval harbor site is divided into north and south areas. The concentration of 22 elements in soil samples from the north of the harbor site was determined in order to identify the geochemical signatures of the Medieval harbor site. The evidence described in the north area is an example of identification of both natural and anthropogenic processes that lead to geochemical variations within the archaeological soils. The north area of the site contains silt and sandy soils characterized by highest concentration of Zr and relatively low levels of most other elements (except for Sr and TS). Negative or weak positive correlations between TiO2 and MnO, and CaO and P2O5 in the north area indicate that this association of elements represents an ancient anthropogenic signature, especially related to residential sites in all soil types. Correlation between TiO2 and Ni, Y, Nb, Zr, Th, and Fe2O3 did not reflect the anthropogenic history. However, these elements and their ratios can be used to identify sources, as well as to establish baseline concentration of other elements which are influenced by anthropogenic and detrital inputs

Coronatine inhibits stomatal closure and delays hypersensitive response cell death induced by nonhost bacterial pathogens

Pseudomonas syringae is the most widespread bacterial pathogen in plants. Several strains of P. syringae produce a phytotoxin, coronatine (COR), which acts as a jasmonic acid mimic and inhibits plant defense responses and contributes to disease symptom development. In this study, we found that COR inhibits early defense responses during nonhost disease resistance. Stomatal closure induced by a nonhost pathogen, P. syringae pv. tabaci, was disrupted by COR in tomato epidermal peels. In addition, nonhost HR cell death triggered by P. syringae pv. tabaci on tomato was remarkably delayed when COR was supplemented along with P. syringae pv. tabaci inoculation. Using isochorismate synthase (ICS)-silenced tomato plants and transcript profiles of genes in SA- and JA-related defense pathways, we show that COR suppresses SA-mediated defense during nonhost resistance

Evaluation of Present Lake Environment from Geochemistry of Bottom Sediment of Hartbeespoort Dam, North-West Province, South Africa

Present Lake Environment of Hartbeespoort Dam was evaluated from Geochemistry of bottom Sediment. Ten (10) bottom sediment samples were collected across the entire Lake. The geochemical composition of the sediment samples was determined using X-ray fluorescence (XRF); trace and major elements determined includes As, Pb, Zn, Cu, Ni, Cr, Fe2O3, TiO2, MnO, CaO and P2O5. The trace elements concentrations of the sediment were grouped into three zones base on their spatial distribution. The Western zone of the lake shows a remarkable enrichment in Nickel (Ni) and Chromium (Cr) and could be associated with geogenic source. However high enrichment of phosphate (P2O5) observed in the same zone could be attributed to anthropogenic source, due to agricultural activities on the catchment of Magalies River. Moderate enrichment of As, Zn, Cu, Cr and Pb was recorded in the central zone and could be ascribed to entrapment by fine-grained organic and Fe-rich clay deposit in the central part of the lake; this was showcased by the strong positive correlation between the trace elements and Fe2O3. As, Zn, Pb and Cu were highly enriched in the South – Eastern zone and anthropogenic source could be responsible for the enrichment due to the influence of the Crocodile River. The average concentration of As, Pb, Zn, Cu, Ni and Cr in the sediment were evaluated by comparison with the upper continental crust (UCC), Shale standard (Turekian and Wedepohl, 1961) and Sediment quality guidelines (SQG); the result indicates that As, Pb, Zn, Cu and Cr in the study area were above the lowest effect level (LEL) but below the severe affect level (SEL) which shows that the impact on biota is moderate. However, Nickel (Ni) was above the severe effect level and could therefore have severe effect on the aquatic environment. Keywords: aquatic environment, Bottom Sediment, Heavy Metals, Hartbeespoort Dam, X-ray fluorescence DOI: 10.7176/JEES/9-11-10 Publication date: November 30th 201

Drought Stress Acclimation Imparts Tolerance to Sclerotinia sclerotiorum and Pseudomonas syringae in Nicotiana benthamiana

Acclimation of plants with an abiotic stress can impart tolerance to some biotic stresses. Such a priming response has not been widely studied. In particular, little is known about enhanced defense capacity of drought stress acclimated plants to fungal and bacterial pathogens. Here we show that prior drought acclimation in Nicotiana benthamiana plants imparts tolerance to necrotrophic fungus, Sclerotinia sclerotiorum, and also to hemi-biotrophic bacterial pathogen, Pseudomonas syringae pv. tabaci. S. sclerotiorum inoculation on N. benthamiana plants acclimated with drought stress lead to less disease-induced cell death compared to non-acclimated plants. Furthermore, inoculation of P. syringae pv. tabaci on N. benthamiana plants acclimated to moderate drought stress showed reduced disease symptoms. The levels of reactive oxygen species (ROS) in drought acclimated plants were highly correlated with disease resistance. Further, in planta growth of GFPuv expressing P. syringae pv. tabaci on plants pre-treated with methyl viologen showed complete inhibition of bacterial growth. Taken together, these experimental results suggested a role for ROS generated during drought acclimation in imparting tolerance against S. sclerotiorum and P. syringae pv. tabaci. We speculate that the generation of ROS during drought acclimation primed a defense response in plants that subsequently caused the tolerance against the pathogens tested

Structure and expression of 12-oxophytodienoate reductase (OPR) subgroup I gene in pea and oxidoreductase activity of their recombinant proteins

Recently, we observed that expression of a pea gene (S64) encoding an oxophytodienoic acid reductase (OPR) was induced by a suppressor of pea defense responses, secreted by the pea pathogen Mycosphaerella pinodes. Because it is known that OPRs are usually encoded by families of homologous genes, we screened for genomic and cDNA clones encoding members of this putative OPR family in pea. We isolated five members of the OPR gene family from a pea genomic DNA library, and amplified six cDNA clones, including S64, by RT-PCR (reverse transcriptase-PCR). Sequencing analysis revealed that S64 corresponds to PsOPR2, and the amino acid sequences of the predicted products of the six OPR-like genes shared more than 80% identity with each other. Based on their sequence similarity, all these OPR-like genes code for OPRs of subgroup I, i.e., enzymes which are not required for jasmonic acid biosynthesis. However, the genes varied in their exon/intron organization and in their promoter sequences. To investigate the expression of each individual OPR-like gene, RT-PCR was performed using gene-specific primers. The results indicated that the OPR-like gene most strongly induced by the inoculation of pea plants with a compatible pathogen and by treatment with the suppressor from M. pinodes was PsOPR2. Furthermore, the ability of the six recombinant OPR-like proteins to reduce a model substrate, 2-cyclohexen-1-one (2-CyHE), was investigated. The results indicated that PsOPR1, 4 and 6 display robust activity, and PsOPR2 has a most remarkable ability to reduce 2-CyHE, whereas PsOPR3 has little and PsOPR5 does not reduce this compound. Thus, the six OPR-like proteins can be classified into four types. Interestingly, the gene structures, expression profiles, and enzymatic activities used to classify each member of the pea OPR-like gene family are clearly correlated, indicating that each member of this OPR-like family has a distinct function.</p

A bacterial cysteine protease effector protein interferes with photosynthesis to suppress plant innate immune responses

The bacterial pathogen Pseudomonas syringae pv tomato DC3000 suppresses plant innate immunity with effector proteins injected by a type III secretion system (T3SS). The cysteine protease effector HopN1, which reduces the ability of DC3000 to elicit programmed cell death in non-host tobacco, was found to also suppress the production of defence-associated reactive oxygen species (ROS) and callose when delivered by Pseudomonas fluorescens heterologously expressing a P. syringae T3SS. Purified His 6 -tagged HopN1 was used to identify tomato PsbQ, a member of the oxygen evolving complex of photosystem II (PSII), as an interacting protein. HopN1 localized to chloroplasts and both degraded PsbQ and inhibited PSII activity in chloroplast preparations, whereas a HopN1 D299A non-catalytic mutant lost these abilities. Gene silencing of NtPsbQ in tobacco compromised ROS production and programmed cell death