Influence of Glomus etunicatum/Zea mays mycorrhiza on atrazine degradation, soil phosphatase and dehydrogenase activities, and soil microbial community structure

The effects of an arbuscular mycorrhizal (AM) fungus (Glomus etunicatum) on atrazine dissipation, soil phosphatase and dehydrogenase activities and soil microbial community structure were investigated. A compartmented side-arm ('cross-pot') system was used for plant cultivation. Maize was cultivated in the main root compartment and atrazine-contaminated soil was added to the side-arms and between them 650 or 37 mu m nylon mesh was inserted which allowed mycorrhizal roots or extraradical mycelium to access atrazine in soil in the side-arms. Mycorrhizal roots and extraradical mycelium increased the degradation of atrazine in soil and modified the soil enzyme activities and total soil phospholipid fatty acids (PLFAs). Atrazine declined more and there was greater stimulation of phosphatase and dehydrogenase activities and total PLFAs in soil in the extraradical mycelium compartment than in the mycorrhizal root compartment when the atrazine addition rate to soil was 5.0 mg kg(-1). Mycelium had a more important influence than mycorrhizal roots on atrazine degradation. However, when the atrazine addition rate was 50.0 mg kg(-1). atrazine declined more in the mycorrhizal root compartment than in the extraradical mycelium compartment, perhaps due to inhibition of bacterial activity and higher toxicity to AM mycelium by atrazine at higher concentration. Soil PLFA profiles indicated that the AM fungus exerted a pronounced effect on soil microbial community structure. (C) 2009 Elsevier Ltd. All rights reserved

Partitioning of phenanthrene by root cell walls and cell wall fractions of wheat (Triticum aestivum L.)

Plant cells have been reported to play an important role in the uptake of organic contaminants. This study was undertaken to provide an insight into the role of the root cell walls and their subfractions on sorption of phenanthrene to roots of wheat (Triticum aestivum L.). Root cell walls were isolated and further sequentially fractioned by removing pectin, hemicellulose one, and hemicellulose two. They were characterized by elemental analysis, Fourier transform infrared spectroscopy, and solid-state (13)C NMR. Root cell walls had a greater proportion of aromatic carbon and exhibited a lower polarity than the bulk roots. There was a stepwise increase in aromatic carbon content and a decrease in polarity following the sequential fractionation. The sorption affinity of phenanthrene increased gradually following the sequential extraction of root cells. A significant positive correlation between the sorption affinity K(OC) values and the aromatic carbon contents (r(2) = 0.896, p < 0.01) and a negative correlation between the sorption affinity K(OC) values and polarity ((O + N)/C) of root cell fractions (r(2) = 0.920, p < 0.01) were obtained. Improved modeling was achieved for phenanthrene sorption by involving the contribution of root cell walls as a source of root carbohydrates instead of using root lipids alone, which further confirms the significant contribution of root cell walls to phenanthrene sorption on wheat roots. The results provide evidence for the importance of the root cell walls in the partitioning of phenanthrene by plant roots

Behavior of decabromodiphenyl ether (BDE-209) in the soil-plant system: uptake, translocation, and metabolism in plants and dissipation in soil

Deca-bromodiphenyl ether (BDE-209) is the major component of the commercial deca-BDE flame retardant. There is increasing concern over BDE-209 due to its increasing occurrence in the environment and in humans. In this study the behavior of BDE-209 in the soil-plant system was investigated. Accumulation of BDE-209 was observed in the roots and shoots of all the six plant species examined, namely ryegrass, alfalfa, pumpkin, summer squash, maize, and radish. Root uptake of BDE-209 was positively correlated with root lipid content (P < 0.001, R(2) = 0.81). The translocation factor (TF, C(shoot)/C(root)) of BDE-209 was inversely related to its concentration in roots. Nineteen lower brominated (di- to nor a-) PBDEs were detected in the soil and plant samples and five hydroxylated congeners were detected in the plant samples, indicating debromination and hydroxylation of BDE-209 in the soil-plant system. Evidence of a relatively higher proportion of penta- through di-BDE congeners in plant tissues than in the soil indicates that there is further debromination of PBDEs within plants or low brominated PBDEs are more! readily taken up by plants. A significant negative correlation between the residual BDE-209 concentration in soil and the soil microbial biomass measured as the total phospholipid fatty, acids (PLFAs) (P < 0.05, R(2) = 0.74) suggests that microbial metabolism and degradation contribute to BDE-209 dissipation in soil. These results provide important information about the behavior of BDE-209 in the soil-plant system

The impacts of magnetic fields on the thermocapillary convection in two layers fluid system

Paper presented at the 5th International Conference on Heat Transfer, Fluid Mechanics and Thermodynamics, South Africa, 1-4 July, 2007.Under a horizontal temperature gradient along the liquidliquid interface, the developing processes of thermocapillary convection in two layers immiscible fluids system absent gravity were simulated numerically, where the upper layer fluid was encapsulant B2O3, the underlayer fluid was melting InP in this paper. The effects of different direction magnetic field on the developing behaviors of thermocapillary convection were investigated. The results showed that the flow pattern was changed obviously and the thermocapillary convection was damped in some extent and the temperature distributions became more uniform if magnetic fields in X, Y or Z direction were applied. Z direction magnetic field had a stronger effect on the thermocapillary convection and it was enough to suppress convection significantly at Bz between 0.15T and 0.2T. The simulation became numerically unstable when Bz was over 0.2T.cs201

Extraction of Step-Repulsion Strengths from Terrace Width Distributions: Statistical and Analytic Considerations

Recently it has been recognized that the so-called generalized Wigner distribution may provide at least as good a description of terrace width distributions (TWDs) on vicinal surfaces as the standard Gaussian fit and is particularly applicable for weak repulsions between steps, where the latter fails. Subsequent applications to vicinal copper surfaces at various temperatures confirmed the serviceability of the new analysis procedure but raised some theoretical questions. Here we address these issues using analytical, numerical, and statistical methods. We propose an extension of the generalized Wigner distribution to a two-parameter fit that allows the terrace widths to be scaled by an optimal effective mean width. We discuss quantitatively the approach of a Wigner distribution to a Gaussian form for strong repulsions, how errors in normalization or mean affect the deduced interaction, and how optimally to extract the interaction from the variance and mean of the TWD. We show that correlations reduce by two orders of magnitude the number of {\em independent} measurements in a typical STM image. We also discuss the effect of the discreteness ("quantization") of terrace widths, finding that for high misorientation (small mean width) the standard continuum analysis gives faulty estimates of step interactions.Comment: 13 pages, 7 figures; info added on # ind. measurements/STM imag

Spectral high resolution feature selection for retrieval of combustion temperature profiles

Proceeding of: 7th International Conference on Intelligent Data Engineering and Automated Learning, IDEAL 2006 (Burgos, Spain, September 20-23, 2006)The use of high spectral resolution measurements to obtain a retrieval of certain physical properties related with the radiative transfer of energy leads a priori to a better accuracy. But this improvement in accuracy is not easy to achieve due to the great amount of data which makes difficult any treatment over it and it's redundancies. To solve this problem, a pick selection based on principal component analysis has been adopted in order to make the mandatory feature selection over the different channels. In this paper, the capability to retrieve the temperature profile in a combustion environment using neural networks jointly with this spectral high resolution feature selection method is studied.Publicad

Proteomic profiling of neuromas reveals alterations in protein composition and local protein synthesis in hyper-excitable nerves

Neuropathic pain may arise following peripheral nerve injury though the molecular mechanisms associated with this are unclear. We used proteomic profiling to examine changes in protein expression associated with the formation of hyper-excitable neuromas derived from rodent saphenous nerves. A two-dimensional difference gel electrophoresis ( 2D-DIGE) profiling strategy was employed to examine protein expression changes between developing neuromas and normal nerves in whole tissue lysates. We found around 200 proteins which displayed a > 1.75-fold change in expression between neuroma and normal nerve and identified 55 of these proteins using mass spectrometry. We also used immunoblotting to examine the expression of low-abundance ion channels Nav1.3, Nav1.8 and calcium channel alpha 2 delta-1 subunit in this model, since they have previously been implicated in neuronal hyperexcitability associated with neuropathic pain. Finally, S(35)methionine in vitro labelling of neuroma and control samples was used to demonstrate local protein synthesis of neuron-specific genes. A number of cytoskeletal proteins, enzymes and proteins associated with oxidative stress were up-regulated in neuromas, whilst overall levels of voltage-gated ion channel proteins were unaffected. We conclude that altered mRNA levels reported in the somata of damaged DRG neurons do not necessarily reflect levels of altered proteins in hyper-excitable damaged nerve endings. An altered repertoire of protein expression, local protein synthesis and topological re-arrangements of ion channels may all play important roles in neuroma hyper-excitability