Eco-Evolutionary Implications of Environmental Change Across Heterogeneous Landscapes

Species use a variety of mechanisms to adapt to environmental change. These range from spatially tracking optimal environments, to phenotypically plastic responses and evolutionary adaptation. Due to increases in anthropogenic influence on environments, characteristics of change such as their duration and magnitude are undergoing fundamental shifts away from the natural disturbance regimes that shaped species’ evolution. This dissertation uses empirical data and simulation models to examine the ecological and evolutionary consequences of environmental change across real, heterogeneous landscapes for multiple species, with an emphasis on anthropogenic changes. I used landscape genetics to evaluate the effects of urbanization on two native amphibian species, spotted salamanders (Ambystoma maculatum) and wood frogs (Lithobates sylvaticus). Population isolation was positively associated with local urbanization and lessened genetic diversity for both species. Resistance surface modelling revealed connectivity was diminished by developed land cover, light roads, interstates, and topography for both species, plus secondary roads and rivers for wood frogs, highlighting the influence of anthropogenic landscape features relative to natural features. Further study of a subset of wood frog populations revealed adaptive evolution associated with urban environments. I identified a set of 37 loci with the capacity to correctly reassign individuals into rural or urban populations with 87.5 and 93.8% accuracy, respectively. I developed an agent-based model to examine how gene flow, rates of change, and strength of landscape spatial and temporal autocorrelation influence abundance outcomes for species experiencing an environmental shift. Analysis of 36 environmental scenarios suggests that environmental variation, which is an emergent property of landscape autocorrelation, is negatively associated with the magnitude and duration of abundance declines following environmental change. Higher levels of gene flow lessened this effect, particularly in abrupt change scenarios, although gradual changes also resulted in demographic costs. Lastly, I used an investigation of an emerging disease in American lobsters (Homarus americanus) to study within-generation responses to environmental pressures. Using whole transcriptome shotgun sequencing I identified eight differentially expressed unigenes associated with the disease and seven related to environmental differences. Collectively, my dissertation provides numerous examples of how anthropogenically induced environmental change can direct ecological and evolutionary processes

Perturbation Theory for Plasmonic Modulation and Sensing

We develop a general perturbation theory to treat small parameter changes in dispersive plasmonic nanostructures and metamaterials. We specifically apply it to dielectric refractive index, and metallic plasma frequency modulation in metal- dielectric nanostructures. As a numerical demonstration, we verify the theory's accu- racy against direct calculations, for a system of plasmonic rods in air where the metal is defined by a two-pole fit of silver's dielectric function. We also discuss new optical behavior related to plasma frequency modulation in such systems. Our approach provides new physical insight for the design of plasmonic devices for biochemical sensing and optical modulation, and future active metamaterial applications.Comment: 17 pages, 6 figure

Primary Particle Type of the Most Energetic Fly's Eye Air Shower

The longitudinal profile of the most energetic cosmic-ray air shower measured so far, the event recorded by the Fly's Eye detector with a reconstructed primary energy of about 320 EeV, is compared to simulated shower profiles. The calculations are performed with the CORSIKA code and include primary photons and different hadron primaries. For primary photons, preshower formation in the geomagnetic field is additionally treated in detail. For primary hadrons, the hadronic interaction models QGSJET01 and SIBYLL2.1 have been employed. The predicted longitudinal profiles are compared to the observation. A method for testing the hypothesis of a specific primary particle type against the measured profile is described which naturally takes shower fluctuations into account. The Fly's Eye event is compatible with any assumption of a hadron primary between proton and iron nuclei in both interaction models, although differences between QGSJET01 and SIBYLL2.1 in the predicted profiles of lighter nuclei exist. The primary photon profiles differ from the data on a level of ~1.5 sigma. Although not favoured by the observation, the primary photon hypothesis can not be rejected for this particular event.Comment: 20 pages, 8 figures; v2 matches version accepted by Astroparticle Physic

Characteristics of geomagnetic cascading of ultra-high energy photons at the southern and northern sites of the Pierre Auger Observatory

Cosmic-ray photons above 10^19 eV can convert in the geomagnetic field and initiate a preshower, i.e. a particle cascade before entering the atmosphere. We compare the preshower characteristics at the southern and northern sites of the Pierre Auger Observatory. In addition to a shift of the preshower patterns on the sky due to the different pointing of the local magnetic field vectors, the fact that the northern Auger site is closer to the geomagnetic pole results in a different energy dependence of the preshower effect: photon conversion can start at smaller energies, but large conversion probabilitites (>90%) are reached for the whole sky at higher energies compared to the southern Auger site. We show how the complementary preshower features at the two sites can be used to search for ultra-high energy photons among cosmic rays. In particular, the different preshower characteristics at the northern Auger site may provide an elegant and unambiguous confirmation if a photon signal is detected at the southern site.Comment: 25 pages, 14 figures, minor changes, conclusions unchanged, Appendix A replaced, accepted by Astroparticle Physic

On a possible photon origin of the most-energetic AGASA events

In this work the ultra high energy cosmic ray events recorded by the AGASA experiment are analysed. With detailed simulations of the extensive air showers initiated by photons, the probabilities are determined of the photonic origin of the 6 AGASA events for which the muon densities were measured and the reconstructed energies exceeded 10^20 eV. On this basis a new, preliminary upper limit on the photon fraction in cosmic rays above 10^20 eV is derived and compared to the predictions of exemplary top-down cosmic-ray origin models.Comment: 3 pages, 1 figure, 2 tables; presented at XIII ISVHECRI, Pylos, Greec

Slovak Nuclear Regulatory Body Position in the Transport of Radioactive Waste

This paper describes safety requirements for transport of radioactive waste in Slovakia and the role of regulatory body in the transport licensing and assessment processes. Importance of radioactive waste shipments have been increased since 1999 by starting of NPP A-1 decommissioning and operation of near surface disposal facility. Also some information from history of shipment as well as future activities are given. Legal basis for radioactive waste transport is resulting from IAEA recommendations in this area. Different types of transport equipment were approved by regulatory body for both liquid and solid waste and transportation permits were issued to their shipment. Regulatory body attention during evaluation of transport safety is focused mainly on ability of individual packages to withstand different transport conditions and on safety analyses performed for transport equipment for liquid waste with high frequency of shipments. During past three years no event was occurred in connection with radioactive waste transport in Slovakia

Multifactor Interactions and the Air Traffic Controller: The Interaction of Situation Awareness and Workload in Association with Automation

Air traffic controllers (ATCOs) must maintain a consistently high level of human performance in order to maintain flight safety and efficiency. In current control environments, performance-influencing factors such as workload, fatigue and situation awareness (SA) can co-occur, and interact, to affect performance. However, multifactor influences and the association with performance are under-researched. This study utilized a high fidelity human in the loop enroute air traffic control simulation to investigate the relationship between workload, situation awareness and ATCO performance. The study aimed to replicate and extend Edwards, Sharples, Wilson and Kirwan's (2012) previous study and confirm multifactor interactions with a participant sample of ex-controllers. The study also aimed to extend Edwards et al.'s previous research by comparing multifactor relationships across 4 automation conditions. Results suggest that workload and SA may interact to produce a cumulative impact on controller performance, although the effect of the interaction on performance may be dependent on the context and amount of automation present. Findings have implications for human-automation teaming in air traffic control, and the potential prediction and support of ATCO performance

High-Q exterior whispering gallery modes in a metal-coated microresonator

We propose a kind of plasmonic whispering gallery modes highly localized on the exterior surface of a metal-coated microresonator. This exterior (EX) surface mode possesses high quality factors at room temperature, and can be efficiently excited by a tapered fiber. The EX mode can couple to an interior (IN) mode and this coupling produces a strong anti-crossing behavior, which not only allows conversion of IN to EX modes, but also forms a long-lived anti-symmetric mode. As a potential application, the EX mode could be used for a biosensor with a sensitivity high up to 500 nm per refraction index unit, a large figure of merit, and a wide detection range