152 research outputs found

    Lower critical solution temperature (LCST) phase behaviour of an ionic liquid and its control by supramolecular host–guest interactions

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    Lower critical solution temperature (LCST) phase behaviour of an imidazolium- based ionic liquid is reported, which can be controlled by concentration, the choice of cation, anion and solvent, and by supramolecular host–guest complex formation. Molecular dynamics simulations provide insight into the molecular basis of this LCST phenomenon. This thermo-responsive system has potential applications in cloud point extraction processes

    The Use of Cohort Facebook Pages in MFT Training Programs

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    The current study explores how private cohort Facebook pages impact a MFT students’ training experience. Limited research has been conducted regarding social media and clinical training programs. Students from national MFT master’s and doctoral programs will be interviewed about their experience with private cohort Facebook pages. Students will participate in focus groups lead by student-researchers in order to increase participation and anonymity. Data will be analyzed using Strauss and Corbin’ s (1990) grounded theory. This research is essential because of the increase of usage of Social Media in today’s society. Graduate programs are implementing the use of Facebook pages for the dissemination of program information and networking between current and former students. However, the impact of social media usage in Clinical Program Training settings among students has not been fully researched

    Photoinduced hole hopping through tryptophans in proteins

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    Hole hopping through tryptophan/tyrosine chains enables rapid unidirectional charge transport over long distances. We have elucidated structural and dynamical factors controlling hopping speed and efficiency in two modified azurin constructs that include a rhenium(I) sensitizer, Re(His)(CO)3(dmp)+, and one or two tryptophans (W1, W2). Experimental kinetics investigations showed that the two closely spaced (3 to 4 Å) intervening tryptophans dramatically accelerated long-range electron transfer (ET) from CuI to the photoexcited sensitizer. In our theoretical work, we found that time-dependent density-functional theory (TDDFT) quantum mechanics/molecular mechanics/molecular dynamics (QM/MM/MD) trajectories of low-lying triplet excited states of ReI(His)(CO)3(dmp)+–W1(–W2) exhibited crossings between sensitizer-localized (*Re) and charge-separated [ReI(His)(CO)3(dmp‱–)/(W1‱+ or W2‱+)] (CS1 or CS2) states. Our analysis revealed that the distances, angles, and mutual orientations of ET-active cofactors fluctuate in a relatively narrow range in which the cofactors are strongly coupled, enabling adiabatic ET. Water-dominated electrostatic field fluctuations bring *Re and CS1 states to a crossing where *Re(CO)3(dmp)+←W1 ET occurs, and CS1 becomes the lowest triplet state. ET is promoted by solvation dynamics around *Re(CO)3(dmp)+(W1); and CS1 is stabilized by Re(dmp‱–)/W1‱+ electron/hole interaction and enhanced W1‱+ solvation. The second hop, W1‱+←W2, is facilitated by water fluctuations near the W1/W2 unit, taking place when the electrostatic potential at W2 drops well below that at W1‱+. Insufficient solvation and reorganization around W2 make W1‱+←W2 ET endergonic, shifting the equilibrium toward W1‱+ and decreasing the charge-separation yield. We suggest that multiscale TDDFT/MM/MD is a suitable technique to model the simultaneous evolution of photogenerated excited-state manifolds

    Tryptophan to Tryptophan Hole Hopping in an Azurin Construct.

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    Electron transfer (ET) between neutral and cationic tryptophan residues in the azurin construct [ReI(H126)(CO)3(dmp)](W124)(W122)CuI (dmp = 4,7-Me2-1,10-phenanthroline) was investigated by Born-Oppenheimer quantum-mechanics/molecular mechanics/molecular dynamics (QM/MM/MD) simulations. We focused on W124‱+ ← W122 ET, which is the middle step of the photochemical hole-hopping process *ReII(CO)3(dmp‱-) ← W124 ← W122 ← CuI, where sequential hopping amounts to nearly 10,000-fold acceleration over single-step tunneling (ACS Cent. Sci. 2019, 5, 192-200). In accordance with experiments, UKS-DFT QM/MM/MD simulations identified forward and reverse steps of W124‱+ ↔ W122 ET equilibrium, as well as back ET ReI(CO)3(dmp‱-) → W124‱+ that restores *ReII(CO)3(dmp‱-). Strong electronic coupling between the two indoles (≄40 meV in the crossing region) makes the productive W124‱+ ← W122 ET adiabatic. Energies of the two redox states are driven to degeneracy by fluctuations of the electrostatic potential at the two indoles, mainly caused by water solvation, with contributions from the protein dynamics in the W122 vicinity. ET probability depends on the orientation of Re(CO)3(dmp) relative to W124 and its rotation diminishes the hopping yield. Comparison with hole hopping in natural systems reveals structural and dynamics factors that are important for designing efficient hole-hopping processes

    Hole Hopping Across a Protein-Protein Interface.

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    We have investigated photoinduced hole hopping in a Pseudomonas aeruginosa azurin mutant Re126WWCuI, where two adjacent tryptophan residues (W124 and W122) are inserted between the CuI center and a Re photosensitizer coordinated to a H126 imidazole (Re = ReI(H126)(CO)3(dmp)+, dmp = 4,7-dimethyl-1,10-phenanthroline). Optical excitation of this mutant in aqueous media (//(CuII)' back ET that occurs over 12 Å, in contrast to the 23 Å, 120 us step in Re126WWCuI. Importantly, dimerization makes Re126FWCuI photoreactive and, in the case of {Re126WWCuI}2, channels the photoproduced "hole" to the molecule that was not initially photoexcited, thereby shortening the lifetime of ReI(H126)(CO)3(dmp‱-)//CuII. Whereas two adjacent W124 and W122 indoles dramatically enhance CuI->*Re intramolecular multistep ET, the tryptophan quadruplex in {Re126WWCuI}2 does not accelerate intermolecular electron transport; instead, it acts as a hole storage and crossover unit between inter- and intramolecular ET pathways. Irradiation of {Re126WWCuII}2 or {Re126FWCuII}2 also triggers intermolecular *Re////(W122‱+)' intermolecular charge recombination. Our findings shed light on the factors that control interfacial hole/electron hopping in protein complexes and on the role of aromatic amino acids in accelerating long-range electron transport

    Two Tryptophans Are Better Than One in Accelerating Electron Flow through a Protein

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    We have constructed and structurally characterized a <i>Pseudomonas aeruginosa</i> azurin mutant <b>Re126WWCu<sup>I</sup></b>, where two adjacent tryptophan residues (W124 and W122, indole separation 3.6–4.1 Å) are inserted between the Cu<sup>I</sup> center and a Re photosensitizer coordinated to the imidazole of H126 (Re<sup>I</sup>(H126)­(CO)<sub>3</sub>(4,7-dimethyl-1,10-phenanthroline)<sup>+</sup>). Cu<sup>I</sup> oxidation by the photoexcited Re label (*Re) 22.9 Å away proceeds with a ∌70 ns time constant, similar to that of a single-tryptophan mutant (∌40 ns) with a 19.4 Å Re–Cu distance. Time-resolved spectroscopy (luminescence, visible and IR absorption) revealed two rapid reversible electron transfer steps, W124 → *Re (400–475 ps, <i>K</i><sub>1</sub> ≅ 3.5–4) and W122 → W124<sup>‱+</sup> (7–9 ns, <i>K</i><sub>2</sub> ≅ 0.55–0.75), followed by a rate-determining (70–90 ns) Cu<sup>I</sup> oxidation by W122<sup>‱+</sup> ca. 11 Å away. The photocycle is completed by 120 ÎŒs recombination. No photochemical Cu<sup>I</sup> oxidation was observed in <b>Re126FWCu<sup>I</sup></b>, whereas in <b>Re126WFCu<sup>I</sup></b>, the photocycle is restricted to the ReH126W124 unit and Cu<sup>I</sup> remains isolated. QM/MM/MD simulations of <b>Re126WWCu<sup>I</sup></b> indicate that indole solvation changes through the hopping process and W124 → *Re electron transfer is accompanied by water fluctuations that tighten W124 solvation. Our finding that multistep tunneling (hopping) confers a ∌9000-fold advantage over single-step tunneling in the double-tryptophan protein supports the proposal that hole-hopping through tryptophan/tyrosine chains protects enzymes from oxidative damage

    Molecular dynamics simulation studies of the interactions between ionic liquids and amino acids in aqueous solution

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    Although the understanding of the influence of ionic liquids (ILs) on the solubility behavior of biomolecules in aqueous solutions is relevant for the design and optimization of novel biotechnological processes, the underlying molecular-level mechanisms are not yet consensual or clearly elucidated. In order to contribute to the understanding of the molecular interactions established between amino acids and ILs in aqueous media, classical molecular dynamics (MD) simulations were performed for aqueous solutions of five amino acids with different structural characteristics (glycine, alanine, valine, isoleucine, and glutamic acid) in the presence of 1-butyl-3-methylimidazolium bis(trifluoromethyl)sulfonyl imide. The results from MD simulations enable to relate the properties of the amino acids, namely their hydrophobicity, to the type and strength of their interactions with ILs in aqueous solutions and provide an explanation for the direction and magnitude of the solubility phenomena observed in [IL + amino acid + water] systems by a mechanism governed by a balance between competitive interactions of the IL cation, IL anion, and water with the amino acids
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