712 research outputs found

    Functional Analysis of Vaccinia Virus B5R Protein: Role of the Cytoplasmic Tail

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    AbstractVaccinia extracellular enveloped virus (EEV) is important for cell-to-cell and long-range virus spread bothin vitroandin vivo. Six genes have been identified that encode protein constituents of the EEV outer membrane, and some of these proteins are critical for EEV formation. The B5R gene encodes an EEV-specific type I membrane protein, and deletion of this gene markedly decreases EEV formation and results in a small plaque phenotype. Data suggest that the transmembrane domain, cytoplasmic tail, or both contain the EEV localization signals that are required for targeting of the B5R protein to EEV and for EEV formation. Here, we report the construction of mutant vaccinia viruses in which the wild-type B5R gene was replaced with a mutated one that encodes a protein with the putative cytoplasmic tail deleted. The mutated protein showed normal intracellular distribution and was properly incorporated into EEV. Vaccinia viruses expressing the B5R protein lacking the cytoplasmic tail formed plaques that were similar in type and size to those formed by wild-type viruses and produced equivalent amounts of infectious EEV. These results indicate that the B5R cytoplasmic tail is not necessary for EEV formation and points to the transmembrane domain as the major determinant for targeting the B5R protein to the outer membrane of EEV and for supporting EEV formation

    Diseño de un modelo de datos de redes para el transporte multimodal

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    Esta comunicación tiene por objeto el análisis de las relaciones entre redes de transporte y paisaje. Se aborda el análisis de la estructura de la red y su caracterización, para dar soporte a la modelización de distintos escenarios, lo que implica un complejo modelo de datos en el que se trabaja con una red multimodal conformada por los siguientes modos: transporte por carretera, ferroviario, peatonal y náutico. Se hace hincapié en el transporte combinado que emplea los diferentes modos, como ocurre frecuentemente con el viaje turístico. El territorio en el que se construye el modelo, a partir de los mapas topográficos 1:5000 y 1.000, que se complementan con ortofotografía, es la isla de Tenerife.This paper explores the relationship between transport networks and landscape. The network structure and its characteristics are studied in order to support the modeling of different scenarios. This implies a complex data model which works with a multimodal network. It is composed by different features: roads, railroads, pedestrian paths and nautical tracks. A combined transport system (the touristic travel) employing different modalities is the focus of interest. Tenerife Island acts as a reference of this transport system. Base maps in 1:5000 and 1:1000 scales and a rectified photo are used

    Validation of Picture Free and Cued Selective Reminding Test for Illiteracy in Lima, Peru

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    Dementia in Latin America is a crucial public health problem. Identifying brief cognitive screening (BCS) tools for the primary care setting is crucial, particularly for illiterate individuals. We evaluated tool performance characteristics and validated the free and total recall sections of the Free and Cued Selective Reminding Test-Picture version (FCSRT-Picture) to discriminate between 63 patients with early Alzheimer?s disease dementia (ADD), 60 amnestic mild cognitive impairment (aMCI) and 64 cognitively healthy Peruvian individuals with illiteracy from an urban area. Clinical, functional, and cognitive assessments were performed. FCSRT-Picture performance was assessed using receiver operating characteristic curve analyses. The mean ± standard deviation scores were 7.7 ± 1.0 in ADD, 11.8 ± 1.6 in aMCI, and 29.5 ± 1.8 in controls. The FCSRT-Picture had better performance characteristics for distinguishing controls from aMCI compared with several other BCS tools, but similar characteristics between controls and early ADD. The FCSRT-Picture is a reliable BCS tool for illiteracy in Peru

    Open Peer Review Module for Open Access Repositories

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    Presentamos el primer módulo de revisión por pares abierto para repositorios de acceso abierto. El módulo, diseñado en esta primera etapa para la integración con repositorios DSpace, para evitar ‘endogamia’, permite a cualquier especialista ofrecer una evaluación cualitativa y cuantitativa de cualquier trabajo de investigación alojado en un repositorio compatible. El sistema se apoya en el uso de métricas ponderadas de reputación para artículos, revisiones, autores y revisores. Una función de búsqueda avanzada permite a los usuarios del repositorio filtrar u ordenar los trabajos de investigación por su reputación, que se calcula basándose en las revisiones que recibe. La integración de la revisión por pares en los repositorios promueve la discusión abierta al permitir una colaboración directa, abierta y transparente entre los autores y los revisores, y produce nuevas métricas que reflejan directamente la calidad de un trabajo de investigación percibida por los colegas expertos, al contrario que las métricas actuales disponibles que dan cuenta de la calidad solo de manera indirecta a través de las estadísticas de uso. El sistema de revisión por pares implementado permite que los revisores de un trabajo y los autores del mismo (derecho de réplica) que estén en la base de datos del repositorio pueden hacer comentarios sobre las revisiones del trabajo. Esta es una opción que podría ser ampliada a todos los especialistas en la materia registrados en el repositorio pero sin tenerlos en cuenta en las métricas. El módulo de revisión por pares en abierto ya se ha instalado en dos importantes repositorios españoles (DIGITAL.CSIC, e-IEO) con resultados iniciales prometedores.We present the first open peer review module for open access repositories. The module, designed in this first stage for integration with DSpace repositories, in order to avoid “inbreeding”, enables any scholar to offer a qualitative and quantitative evaluation of any research object hosted in a compliant repository. Weighted reputation metrics are calculated for articles, reviews, authors and reviewers. An advanced search function allows repository users to filter or sort research objects based on their reputation, which it is calculated based on the reviews received. The integration of peer review in repositories promotes open scholarship by enabling a direct, open and transparent collaboration between authors and reviewers, and produces novel metrics directly reflecting the perceived quality of a research work by expert peers, contrary to current available metrics that only indirectly account for quality through usage statistics. Reviewers of the work and the authors of the work (right of reply) at the repository data base can comment on the reviews of that work. This option may be extended to all specialists in the field registered at the repository but without taking them into account in metrics. The open peer review module has already been installed in two major Spanish repositories (DIGITAL.CSIC, e-IEO) with promising initial results.OpenAIR

    Changes in Present and Future Circulation Types Frequency in Northwest Iberian Peninsula

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    The aim of the work described herein was to study projection scenarios in order to find changes in the synoptic variability of the northwest Iberian Peninsula in the 21st century. To this end, we investigated the changes in the frequency of the different circulation types computed for the study area using three different models used in the IPCC 4th assessment report. The circulation types were computed using the procedure known as Lamb circulation types. The control simulation for the late 20th century was evaluated objectively from the results obtained using data from the NCEP/NCAR reanalysis, as to evaluate the ability of the model to reproduce the present climate. We have compared not only seasonal mean sea level pressure fields but also the mean seasonal frequency of circulation types. The results for the end of the 21st century show a decrease in the frequency of cyclonic, W, and SW circulation types in the spring and summer months. This trend also appears in the autumn, with a concomitant increase in the anticyclonic types

    Differential limit on the extremely-high-energy cosmic neutrino flux in the presence of astrophysical background from nine years of IceCube data

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    We report a quasi-differential upper limit on the extremely-high-energy (EHE) neutrino flux above 5×1065\times 10^{6} GeV based on an analysis of nine years of IceCube data. The astrophysical neutrino flux measured by IceCube extends to PeV energies, and it is a background flux when searching for an independent signal flux at higher energies, such as the cosmogenic neutrino signal. We have developed a new method to place robust limits on the EHE neutrino flux in the presence of an astrophysical background, whose spectrum has yet to be understood with high precision at PeV energies. A distinct event with a deposited energy above 10610^{6} GeV was found in the new two-year sample, in addition to the one event previously found in the seven-year EHE neutrino search. These two events represent a neutrino flux that is incompatible with predictions for a cosmogenic neutrino flux and are considered to be an astrophysical background in the current study. The obtained limit is the most stringent to date in the energy range between 5×1065 \times 10^{6} and 5×10105 \times 10^{10} GeV. This result constrains neutrino models predicting a three-flavor neutrino flux of $E_\nu^2\phi_{\nu_e+\nu_\mu+\nu_\tau}\simeq2\times 10^{-8}\ {\rm GeV}/{\rm cm}^2\ \sec\ {\rm sr}at at 10^9\ {\rm GeV}$. A significant part of the parameter-space for EHE neutrino production scenarios assuming a proton-dominated composition of ultra-high-energy cosmic rays is excluded.Comment: The version accepted for publication in Physical Review

    Book Reviews

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    With the observation of high-energy astrophysical neutrinos by the IceCube Neutrino Observatory, interest has risen in models of PeV-mass decaying dark matter particles to explain the observed flux. We present two dedicated experimental analyses to test this hypothesis. One analysis uses 6 years of IceCube data focusing on muon neutrino ‘track’ events from the Northern Hemisphere, while the second analysis uses 2 years of ‘cascade’ events from the full sky. Known background components and the hypothetical flux from unstable dark matter are fitted to the experimental data. Since no significant excess is observed in either analysis, lower limits on the lifetime of dark matter particles are derived: we obtain the strongest constraint to date, excluding lifetimes shorter than 102810^{28} s at 90% CL for dark matter masses above 10 TeV
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