Mitochondrial fatty acid β-oxidation disorders: from disease to lipidomic studies—a critical review

Fatty acid oxidation disorders (FAODs) are inborn errors of metabolism (IEMs) caused by defects in the fatty acid (FA) mitochondrial β-oxidation. The most common FAODs are characterized by the accumulation of medium-chain FAs and long-chain (3-hydroxy) FAs (and their carnitine derivatives), respectively. These deregulations are associated with lipotoxicity which affects several organs and potentially leads to life-threatening complications and comorbidities. Changes in the lipidome have been associated with several diseases, including some IEMs. In FAODs, the alteration of acylcarnitines (CARs) and FA profiles have been reported in patients and animal models, but changes in polar and neutral lipid profile are still scarcely studied. In this review, we present the main findings on FA and CAR profile changes associated with FAOD pathogenesis, their correlation with oxidative damage, and the consequent disturbance of mitochondrial homeostasis. Moreover, alterations in polar and neutral lipid classes and lipid species identified so far and their possible role in FAODs are discussed. We highlight the need of mass-spectrometry-based lipidomic studies to understand (epi)lipidome remodelling in FAODs, thus allowing to elucidate the pathophysiology and the identification of possible biomarkers for disease prognosis and an evaluation of therapeutic efficacyinfo:eu-repo/semantics/publishedVersio

Identifying cognitive abilities to improve CS1 outcome

Introductory programming courses entail students’ high failure and dropout rates. In an effort to tackle this problem, we carried out a qualitative study aiming to shed some light on the programming phase that is most challenging for students, in order to elicit the specific difficulties they experience while learning to program. In doing so, distinctive cognitive abilities, differentiating subjects in terms of the way they handle programming tasks, were detected. Such aptitudes are represented in three groups of students: those who learn easily, those who never seem to fully grasp what programming requires despite true effort, and those who experience a sudden insight, making them leap from a point were they had difficulties to another where they overcome them. By interviewing teachers and students, abstraction and sequencing elaboration were found to be the two core skills for programming. These results impelled us to consider the mental models’ approach, concluding that there are very specific cognitive functions that are more favorable to learn programming and that are fostered by more adequate schemas of representing reality. Some conclusions involving Problem-based learning as a fit teaching methodology to overcome students’ difficulties are also presented

Heavy metal accumulation in plant species indigenous to a contaminated portuguese site: prospects for phytoremediation

Phytoremediation is a promising alternative to conventional soil clean-up methods; however, up to date, there is still not enough information on plant species suitable for application in this field of science. Therefore, plant screening on contaminated sites can lead to the identification of further species of interest. In the present study, pedological and botanical characteristics of an industrialised area known for its metal contamination, in special with Zn—Esteiro de Estarreja, in Portugal—were examined in a 1-year screening. Twenty-seven species were found, with a higher occurrence and variability in the summer/spring season. Zinc levels in the tissues of the collected plant samples ranged from 34 mg kg−1 in shoots to 2,440 mg kg−1 in roots of different species. Species as Verbascum virgatum, Hypochoeris radicata, Phalaris arundinacea, Conyza bilbaoana, Paspalum urvillei and Aster squamatus have shown high Zn shoot accumulation and bioconcentration factors (BCFshoots > 1) and high metal translocation factors (TF > 1). Others, namely Spergularia capillacea, excluded Zn from the shoot tissues and stored the metal at the root zone (BCFroots > 1), behaving as tolerant plants. Plants were also screened for arbuscular mycorrhizal fungi colonisation, and only few species showed mycorrhizal presence, namely C. bilbaoana, Hirschfeldia incana, Epilobium tetragonum, Conyza sumatrensis, Pteridium aquilinum, P. urvillei and A. squamatus. The present work showed important indigenous species that can cope with installed harsh conditions and with potential for utilisation in phytoremediation strategies, either through metal removal to aerial parts or through its immobilisation in the root zone.info:eu-repo/semantics/acceptedVersio

Assessment of the plant growth promotion abilities of six bacterial isolates using Zea mays as indicator plant

Zea mays, one of the most important cereals worldwide, is a plant not only with food and energy value, but also with phytoremediation potential. The use of plant growth promoting (PGP) rhizobacteria may constitute a biological alternative to increase crop yield and plant resistance to degraded environments. In search for PGP rhizobacteria strains, 6 bacterial isolates were isolated from a metal contaminated site, screened in vitro for their PGP characteristics and their effects on the growth of Z. mays were assessed. Isolates were identified as 3A10T, ECP37T, corresponding to Chryseobacterium palustre and Chryseobacterium humi, and 1ZP4, EC15, EC30 and 1C2, corresponding to strains within the genera Sphingobacterium, Bacillus, Achromobacter, and Ralstonia, respectively. All the bacterial isolates were shown to produce indole acetic acid, hydrogen cyanide and ammonia when tested in vitro for their plant growth promoting abilities, but only isolates 1C2, 1ZP4 and ECP37T have shown siderophore production. Their further application in a greenhouse experiment using Z. mays indicated that plant traits such as root and shoot elongation and biomass production, and nutrient status, namely N and P levels, were influenced by the inoculation, with plants inoculated with 1C2 generally outperforming the other treatments. Two other bacterial isolates, 1ZP4 and ECP37T also led to increased plant growth in the greenhouse. These 3 species, corresponding to strains within the genera Ralstonia (1C2), Sphingobacterium (1ZP4), and to a strain identified as C. humi (ECP37T) can thus be potential agents to increase crop yield in maize plants.info:eu-repo/semantics/acceptedVersio

Diversity of metallophytes and metal(loid)-tolerant bacterial strains in a portuguese mine for phytotechnologies purposes

info:eu-repo/semantics/publishedVersio