Charge disproportionation and Jahn-Teller distortion in LiNiO2 and NaNiO2: A density functional theory study

Density functional theory calculations have been performed on three potential ground-state configurations of LiNiO2 and NaNiO2. These calculations show that, whereas NaNiO2 shows the expected cooperative Jahn-Teller distortion (and therefore a crystal structure with C2/m symmetry), LiNiO2 shows at least two possible crystal structures very close in energy (within 3 meV/f.u.): P21/c and P2/c. Moreover, one of them (P2/c) shows charge disproportionation of the (expected) Ni3+ cations into Ni2+ and Ni4+. We discuss the implications of this complex ground state for the interpretation of the available electron and neutron structure data, its electronic and complex magnetic behaviour

Amino acid and oligopeptide effects on calcium carbonate solutions

Biological organisms display sophisticated control of nucleation and crystallization of minerals. In order to mimic living systems, deciphering the mechanisms by which organic molecules control the formation of mineral phases from solution is a key step. We have used computer simulations to investigate the effects of the amino acids arginine, aspartic acid, and glycine on species that form in solutions of calcium carbonate (CaCO3) at lower and higher levels of supersaturation. This provides net positive, negative, and neutral additives. In addition, we have prepared simulations containing hexapeptides of the amino acids to consider the effect of additive size on the solution species. We find that additives have limited impact on the formation of extended, liquid-like CaCO3 networks in supersaturated solutions. Additives control the amount of (bi)carbonate in solution, but more importantly, they are able to stabilize these networks on the time scales of the simulations. This is achieved by coordinating the networks and assembled additive clusters in solutions. The association leads to subtle changes in the coordination of CaCO3 and reduced mobility of the cations. We find that the number of solute association sites and the size and topology of the additives are more important than their net charge. Our results help to understand why polymer additives are so effective at stabilizing dense liquid CaCO3 phases

The transformation of amorphous calcium carbonate to calcite and classical nucleation theory

The interfaces of calcite with water, dehydrated and hydrated amorphous calcium carbonate are studied with molecular dynamics simulations. The interfacial energies demonstrate that the calcite interface is most stable when in contact with water or low concentration solutions rather than amorphous calcium carbonate. These values are used to test the interplay between supersaturation and the interfacial energy for calcite. They demonstrate that a dissolution-reprecipitation process should always be energetically preferred to a solid state transformation of amorphous calcium carbonate to calcite

Using metadynamics to obtain the free energy landscape for cation diffusion in functional ceramics : dopant distribution control in rare earth-doped BaTiO3

Barium titanate is the dielectric material of choice in most multilayer ceramic capacitors (MLCCs) and thus in the production of ≈3 trillion devices every year, with an estimated global market of ≈$8330 million per year. Rare earth dopants are regularly used to reduce leakage currents and improve the MLCC lifetime. Simulations are used to investigate the ability of yttrium, dysprosium, and gadolinium to reduce leakage currents by trapping mobile oxygen defects. All the rare earths investigated trap oxygen vacancies, however, dopant pairs are more effective traps than isolated dopants. The number of trapping sites increases with the ion size of the dopant, suggesting that gadolinium should be more effective than dysprosium, which contradicts experimental data. Additional simulations on diffusion of rare earths through the lattice during sintering show that dysprosium diffuses significantly faster than the other rare earths considered. As a consequence, its greater ability to reduce oxygen migration is a combination of thermodynamics (a strong ability to trap oxygen vacancies) and kinetics (sufficient distribution of the rare earth in the lattice to intercept the migrating defects)

The Water–Amorphous Calcium Carbonate Interface and Its Interactions with Amino Acids

Amorphous calcium carbonate is often the first phase to precipitate during the mineralisation of calcium carbonate, before the formation of one of the crystalline polymorphs. In vivo, this phase is believed to be essential for the manufacture of minerals displaying non-equilibrium morphologies. The precipitation of this, usually transient, phase and its subsequent transformation into one of the crystalline polymorphs can be controlled by organic molecules. Here, we present a series of Molecular Dynamics simulations that explore the amorphous calcium carbonate – water interface, the attachment of amino acids onto both hydrous and anhydrous amorphous calcium carbonate and their effect on the surface. The results show that surface ions have a different coordination number distribution from bulk ions and can diffuse up to two orders of magnitude faster than their bulk counterparts, suggesting that crystallisation is much more likely to occur in this region. All the amino acids investigated bind to the amorphous calcium carbonate surfaces. However, acidic amino acids have a clear preference for the surface of amorphous CaCO3.H2O. The favoured mode of interaction of the amino acids is through amine and/or guanidine moieties. The important ramifications of the results for our understanding of protein-mineral interactions are discussed

Using simulation to understand the structure and properties of hydrated amorphous calcium carbonate

We report results from studies using four different protocols to prepare hydrated amorphous calcium carbonate, ranging from random initial structures to melting hydrated mineral structures. All protocols give good agreement with experimental X-ray structure factors. However, the thermodynamic properties, ion coordination environments, and distribution of water for the structures produced by the protocols show statistically significant variation depending on the protocols used. We discuss the diffusivity of water through the various structures and its relation to experiments. We show that one protocol (based on melting ikaite) gives a structure where the water is mobile, due to the presence of porosity in the amorphous structure. We conclude that our models of hydrated amorphous calcium carbonate do give a range of behaviour that resembles that observed experimentally, although the variation is less marked in the simulations than in experiments

Significance of atomic-scale defects in flexible surfaces on local solvent and ion behaviour

Many factors can affect the course of heterogeneous nucleation, such as surface chemistry, flexibility and topology, substrate concentration and solubility. Atomic-scale defects are rarely investigated in detail and are often considered to be unimportant surface features. In this work, we set out to investigate the significance of atomic-scale defects in a flexible self-assembled monolayer surface for the behaviour of clusters of Ca2+ and CO32− ions in water. To this end, we use molecular dynamics simulations to estimate the diffusion coefficients of ion clusters at different topological surface features and obtain ionic radial distribution functions around features of interest. Well-tempered metadynamics is used to gain insight into the free energy of ions around selected surface defects. We find that certain defects, which we refer to as active defects, can impair ionic surface diffusion, as well as affect the diffusion of ions in close proximity to the surface feature in question. Our findings suggest that this effect can result in an ability of such topological features to promote ion clustering and increase local ionic concentration at specific surface sites. The work reported here shows how the presence of small atomic-scale defects can affect the role of a surface in the process of heterogeneous nucleation and contributes towards a rational definition of surfaces as effective nucleating agents

A transferable force-field for alkali metal nitrates

We present a new rigid-ion force-field for the alkali metal nitrates that is suitable for simulating solution chemistry, crystallisation and polymorphism. We show that it gives a good representation of the crystal structures, lattice energies, elastic and dielectric properties of these compounds over a wide range of temperatures. Since all the alkali metal nitrates are fitted together using a common model for the nitrate anion, the force-field is also suitable for simulating solid solutions. We use the popular Joung and Cheatham model for the interactions of the alkali metal cations with water and obtain the interaction of the nitrate ion with water by fitting to a hydrate

A-Site Strain and Displacement in Ba1-xCaxTiO3 and Ba1-xSrxTiO3 and the Consequences for the Curie Temperature

Classical computer simulations are performed on the whole solid solution range of Ba1–xCaxTiO3 (BCT) and Ba1–xSrxTiO3 (BST). The enthalpies and volumes of mixing are produced, and a full local structural analysis is performed. The simulations demonstrate that large degrees of disorder form in the BCT solid solution which leads to distortions in the TiO6 octahedra. Comparing the positions of Sr in BST and Ca in BCT, the position of the Sr cation is largely central within the dodecahedra while the position of the Ca is significantly off-center in many configurations. The relaxation is associated with a shift toward an eight coordinate site compared to a 12 coordinate cation. An empirical model is fitted for predicting the Curie Temperature of the solid solution based on the local structure which shows excellent agreement with experimental values