Development of genomic phenotype and immunophenotype of acute respiratory distress syndrome using autophagy and metabolism-related genes.

BackgroundDistinguishing ARDS phenotypes is of great importance for its precise treatment. In the study, we attempted to ascertain its phenotypes based on metabolic and autophagy-related genes and infiltrated immune cells.MethodsTranscription datasets of ARDS patients were obtained from Gene expression omnibus (GEO), autophagy and metabolic-related genes were from the Human Autophagy Database and the GeneCards Database, respectively. Autophagy and metabolism-related differentially expressed genes (AMRDEGs) were further identified by machine learning and processed for constructing the nomogram and the risk prediction model. Functional enrichment analyses of differentially expressed genes were performed between high- and low-risk groups. According to the protein-protein interaction network, these hub genes closely linked to increased risk of ARDS were identified with CytoHubba. ssGSEA and CIBERSORT was applied to analyze the infiltration pattern of immune cells in ARDS. Afterwards, immunologically characterized and molecular phenotypes were constructed according to infiltrated immune cells and hub genes.ResultsA total of 26 AMRDEGs were obtained, and CTSB and EEF2 were identified as crucial AMRDEGs. The predictive capability of the risk score, calculated based on the expression levels of CTSB and EEF2, was robust for ARDS in both the discovery cohort (AUC = 1) and the validation cohort (AUC = 0.826). The mean risk score was determined to be 2.231332, and based on this score, patients were classified into high-risk and low-risk groups. 371 differential genes in high- and low-risk groups were analyzed. ITGAM, TYROBP, ITGB2, SPI1, PLEK, FGR, MPO, S100A12, HCK, and MYC were identified as hub genes. A total of 12 infiltrated immune cells were differentially expressed and have correlations with hub genes. According to hub genes and implanted immune cells, ARDS patients were divided into two different molecular phenotypes (Group 1: n = 38; Group 2: n = 19) and two immune phenotypes (Cluster1: n = 22; Cluster2: n = 35), respectively.ConclusionThis study picked up hub genes of ARDS related to autophagy and metabolism and clustered ARDS patients into different molecular phenotypes and immunophenotypes, providing insights into the precision medicine of treating patients with ARDS

9 W average power, 150 kHz repetition rate diamond Raman laser at 1519 nm, pumped by a Yb fibre amplifier

Commercially available pulsed fibre lasers at ~1.5 μm have many uses in imaging, defense, communications and light radar (LIDAR) [1]. For 3D scanning LIDAR, higher signal-to-noise ratio requires lasers with high average power and high pulse repetition rate (ideally several MHz) for faster scanning rate, whereas to improve distance resolution requires pulse durations <10 ns [2,3]. One limitation of the pulsed fibre lasers at ~1.5 μm is scaling to high average powers [4]. Raman frequency conversion of high average power fibre master oscillator power amplifier (MOPA) systems at ~1 μm is a potential alternative. The large Raman shift and Raman gain of diamond allows two-stage Raman conversion to ~1.5 μm for ~1 μm pumping [5]. Excellent thermal properties make diamond suitable for high average powers [6]. Much work has been done on conversion of 1.064 μm lasers to 1.485 μm using diamond [7]; however, the “eye-safety” requirements for LIDAR typically call for wavelengths above 1.5 μm, due to the order of magnitude higher Maximum Permissible Exposure limit [8]. Developing such a diamond Raman laser (DRL) was the major motivation for this research

Common Molecular Etiologies Are Rare in Nonsyndromic Tibetan Chinese Patients with Hearing Impairment

Background: Thirty thousand infants are born every year with congenital hearing impairment in mainland China. Racial and regional factors are important in clinical diagnosis of genetic deafness. However, molecular etiology of hearing impairment in the Tibetan Chinese population living in the Tibetan Plateau has not been investigated. To provide appropriate genetic testing and counseling to Tibetan families, we investigated molecular etiology of nonsyndromic deafness in this population. Methods: A total of 114 unrelated deaf Tibetan children from the Tibet Autonomous Region were enrolled. Five prominent deafness-related genes, GJB2, SLC26A4, GJB6, POU3F4, and mtDNA 12S rRNA, were analyzed. Inner ear development was evaluated by temporal CT. A total of 106 Tibetan hearing normal individuals were included as genetic controls. For radiological comparison, 120 patients, mainly of Han ethnicity, with sensorineural hearing loss were analyzed by temporal CT. Results: None of the Tibetan patients carried diallelic GJB2 or SLC26A4 mutations. Two patients with a history of aminoglycoside usage carried homogeneous mtDNA 12S rRNA A1555G mutation. Two controls were homozygous for 12S rRNA A1555G. There were no mutations in GJB6 or POU3F4. A diagnosis of inner ear malformation was made in 20.18 % of the Tibetan patients and 21.67 % of the Han deaf group. Enlarged vestibular aqueduct, the most common inner ear deformity, was not found in theTibetan patients, but was seen in 18.33 % of the Han patients. Common molecular etiologies

Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals &lt;1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data

Social movement and democratisation in Taiwan : the case of the 1990 student movement

EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Ureido Derivatives of Neoabietic Acid

A series of ureido derivatives of neoabietic acid were synthesized by application of Curtius rearrangement reaction to neoabietic acid and amines. Structure characterization of these compounds was done by 1H-NMR, 13C-NMR and HRMS spectral analysis

Interstitial nitrogen-induced efficiency alcohol oxidation over heterogeneous N–CoMn2O4 catalyst under visible-light

Developing highly efficient and recyclable photocatalysts through harvesting solar light as energy is crucial to oxidation for industrial implementation, especially for simple transition metal oxidic catalysts without precious/heavy/rare metal dopants. Herein, we like to report the use of nitrogen-doped CoMn2O4 oxide (N–CoMn2O4) as a heterogeneous catalyst for efficient oxidation of various alcohols such as p/m/o-methyl-substituted aromatic alcohols, p-substituted aromatic alcohols including electron-donating and electron-withdrawing substituents, heterocycle-based alcohols and secondary aromatic alcohols to the corresponding aldehydes/ketones, under visible light (>420 ​nm) illumination and mild condition of oxygen as oxidant and room temperature. The relation of various Co-based oxides to their catalytic performance was studied. It is shown that the Co2+ species in N–CoMn2O4, obviously increased by the doping of nitrogen, are acted as catalytic active species coupled with the synergistic effect between Co and Mn species for the enhanced visible-light selective oxidation of alcohols to aldehydes. A plausible catalytic mechanism is proposed basis of control experiments and published studies, which suggests that this oxidation process probably occurs on Co2+ sites via an ionic reactive oxygen species pathway and 1O2 and O2·− species are the reactive oxygen species. This simple transition metal oxide-catalyzed aerobic oxidation provides a green alternative for the manufacture of aldehydes/ketones from alcohols

Improvement in Attention Processing After Surgical Treatment in Functional Pituitary Adenomas:Evidence From ERP Study

Cognitive abilities are impaired in patients with pituitary adenoma. However, studies on attention processing impairment in preoperative patients and attention processing recovery after transsphenoidal adenomectomy are lacking. The study aims to identify the electrophysiological change that relates to attention processing in pituitary patients before and after treatment. Twenty five preoperative pituitary patients and 25 follow-up postoperative patients were recruited. 27 healthy controls (HCs) were matched to the patients with age, gender, and education. Event-related potentials were used to investigate the attention processing in the preoperative patients, postoperative patients, and HCs. Across three groups, all emotional stimuli evoked P200 components. Compared with the HCs or postoperative patients, the amplitudes of P200 in the preoperative patients were higher. Moreover, The amplitudes of P200 decreased in the postoperative patients, which were similar to that in the HCs. The attention processing was improved after surgery, but no significant differences were detected between the postoperative patients and HCs. Abnormal hormone levels may be relevant to the factor that impair attention processing. Compared with that of the HCs and postoperative patients, the P200 component elicited by negative stimuli is higher in preoperative patients, which may illustrate compensatory activity after attention impairments. Furthermore, these data indicate that improvements in attention processing may be attributed to the amelioration of endocrine disorders. This study shows that the P200 component may be used to diagnose attention processing in preoperative pituitary patients and prove the improvement of attention processing in postoperative patients